RNA–Protein interactions for RNA: ENST00000478681.1

COL4A2-205, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-205ENST00000478681 CUL7Q14999 1698 aa22.71■■□□□ 1.23
COL4A2-205ENST00000478681 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
COL4A2-205ENST00000478681 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
COL4A2-205ENST00000478681 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
COL4A2-205ENST00000478681 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
COL4A2-205ENST00000478681 ADCY10Q96PN6 1610 aa22.43■■□□□ 1.18
COL4A2-205ENST00000478681 IQGAP2Q13576 1575 aa22.42■■□□□ 1.18
COL4A2-205ENST00000478681 NPM1P06748 294 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL4A2-205ENST00000478681 KIF13AQ9H1H9 1805 aa22.42■■□□□ 1.18
COL4A2-205ENST00000478681 PTPRGP23470 1445 aa22.4■■□□□ 1.18
COL4A2-205ENST00000478681 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
COL4A2-205ENST00000478681 MAPKBP1O60336 1514 aa22.39■■□□□ 1.17
COL4A2-205ENST00000478681 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
COL4A2-205ENST00000478681 ABCC10Q5T3U5 1492 aa22.35■■□□□ 1.17
COL4A2-205ENST00000478681 DISP1Q96F81 1524 aa22.34■■□□□ 1.17
COL4A2-205ENST00000478681 UGGT2Q9NYU1 1516 aa22.32■■□□□ 1.16
COL4A2-205ENST00000478681 FAM69CQ0P6D2 419 aa22.32■■□□□ 1.16
COL4A2-205ENST00000478681 DIP2BQ9P265 1576 aa22.28■■□□□ 1.16
COL4A2-205ENST00000478681 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
COL4A2-205ENST00000478681 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
COL4A2-205ENST00000478681 UHRF1BP1LA0JNW5 1464 aa22.26■■□□□ 1.15
COL4A2-205ENST00000478681 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
COL4A2-205ENST00000478681 UACAQ9BZF9 1416 aa22.23■■□□□ 1.15
COL4A2-205ENST00000478681 KIAA0556O60303 1618 aa22.21■■□□□ 1.15
COL4A2-205ENST00000478681 CTTNBP2Q8WZ74 1663 aa22.21■■□□□ 1.15
COL4A2-205ENST00000478681 KDM5BQ9UGL1 1544 aa22.16■■□□□ 1.14
COL4A2-205ENST00000478681 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
COL4A2-205ENST00000478681 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
COL4A2-205ENST00000478681 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
COL4A2-205ENST00000478681 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
COL4A2-205ENST00000478681 TSPOAP1O95153 1857 aa22.11■■□□□ 1.13
COL4A2-205ENST00000478681 GLI2P10070 1586 aa22.1■■□□□ 1.13
COL4A2-205ENST00000478681 EEA1Q15075 1411 aa22.07■■□□□ 1.12
COL4A2-205ENST00000478681 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
COL4A2-205ENST00000478681 EPRSP07814 1512 aaKnown RBP22.03■■□□□ 1.12
COL4A2-205ENST00000478681 ABCA8O94911 1581 aa22.03■■□□□ 1.12
COL4A2-205ENST00000478681 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
COL4A2-205ENST00000478681 KDM6BO15054 1643 aa22.01■■□□□ 1.11
COL4A2-205ENST00000478681 PPRC1Q5VV67 1664 aaKnown RBP22.01■■□□□ 1.11
COL4A2-205ENST00000478681 WDR7Q9Y4E6 1490 aa21.96■■□□□ 1.11
COL4A2-205ENST00000478681 MAP3K4Q9Y6R4 1608 aa21.96■■□□□ 1.11
COL4A2-205ENST00000478681 P3H3Q8IVL6 736 aa21.94■■□□□ 1.1
COL4A2-205ENST00000478681 SAMD9Q5K651 1589 aa21.94■■□□□ 1.1
COL4A2-205ENST00000478681 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
COL4A2-205ENST00000478681 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
COL4A2-205ENST00000478681 TEX14Q8IWB6 1497 aa21.88■■□□□ 1.09
COL4A2-205ENST00000478681 ATP10BO94823 1461 aa21.87■■□□□ 1.09
COL4A2-205ENST00000478681 COL17A1Q9UMD9 1497 aaPredicted RBP21.87■■□□□ 1.09
COL4A2-205ENST00000478681 KIF21BO75037 1637 aa21.86■■□□□ 1.09
COL4A2-205ENST00000478681 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
COL4A2-205ENST00000478681 CFAP43Q8NDM7 1665 aa21.82■■□□□ 1.08
COL4A2-205ENST00000478681 CD109Q6YHK3 1445 aa21.82■■□□□ 1.08
COL4A2-205ENST00000478681 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
COL4A2-205ENST00000478681 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
COL4A2-205ENST00000478681 KDM4FA0A1W2PPD8 638 aa21.79■■□□□ 1.08
COL4A2-205ENST00000478681 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
COL4A2-205ENST00000478681 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
COL4A2-205ENST00000478681 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
COL4A2-205ENST00000478681 NUP153P49790 1475 aaKnown RBP21.75■■□□□ 1.07
COL4A2-205ENST00000478681 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
COL4A2-205ENST00000478681 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
COL4A2-205ENST00000478681 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
COL4A2-205ENST00000478681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.67■■□□□ 1.06
COL4A2-205ENST00000478681 HNRNPUL2Q1KMD3 747 aaKnown RBP21.67■■□□□ 1.06
COL4A2-205ENST00000478681 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
COL4A2-205ENST00000478681 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.06
COL4A2-205ENST00000478681 PLEKHD1A6NEE1 506 aa21.63■■□□□ 1.05
COL4A2-205ENST00000478681 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
COL4A2-205ENST00000478681 ADGRL1O94910 1474 aa21.6■■□□□ 1.05
COL4A2-205ENST00000478681 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
COL4A2-205ENST00000478681 NEO1Q92859 1461 aa21.58■■□□□ 1.04
COL4A2-205ENST00000478681 FMN1Q68DA7 1419 aa21.56■■□□□ 1.04
COL4A2-205ENST00000478681 CDK13Q14004 1512 aaKnown RBP21.52■■□□□ 1.04
COL4A2-205ENST00000478681 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.03
COL4A2-205ENST00000478681 RAPGEF3O95398 923 aa21.5■■□□□ 1.03
COL4A2-205ENST00000478681 HECW1Q76N89 1606 aa21.47■■□□□ 1.03
COL4A2-205ENST00000478681 TTC37Q6PGP7 1564 aa21.45■■□□□ 1.02
COL4A2-205ENST00000478681 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
COL4A2-205ENST00000478681 AKNAQ7Z591 1439 aa21.45■■□□□ 1.02
COL4A2-205ENST00000478681 FANCAO15360 1455 aa21.44■■□□□ 1.02
COL4A2-205ENST00000478681 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
COL4A2-205ENST00000478681 CDK11AQ9UQ88 783 aaPredicted RBP21.43■■□□□ 1.02
COL4A2-205ENST00000478681 CFAP74Q9C0B2 1584 aa21.41■■□□□ 1.02
COL4A2-205ENST00000478681 DENND4BO75064 1496 aaPredicted RBP21.4■■□□□ 1.02
COL4A2-205ENST00000478681 PLCH2O75038 1416 aa21.4■■□□□ 1.02
COL4A2-205ENST00000478681 RICTORQ6R327 1708 aa21.4■■□□□ 1.02
COL4A2-205ENST00000478681 LRRIQ1Q96JM4 1722 aa21.38■■□□□ 1.01
COL4A2-205ENST00000478681 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
COL4A2-205ENST00000478681 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
COL4A2-205ENST00000478681 ADAMTSL3P82987 1691 aa21.32■■□□□ 1
COL4A2-205ENST00000478681 EFCAB2Q5VUJ9 269 aa21.32■■□□□ 1
COL4A2-205ENST00000478681 ZMYM4Q5VZL5 1548 aa21.32■■□□□ 1
COL4A2-205ENST00000478681 KIF14Q15058 1648 aa21.32■■□□□ 1
COL4A2-205ENST00000478681 MYO5CQ9NQX4 1742 aa21.31■■□□□ 1
COL4A2-205ENST00000478681 SCAPERQ9BY12 1400 aa21.3■■□□□ 1
COL4A2-205ENST00000478681 ARHGEF40Q8TER5 1519 aa21.3■■□□□ 1
COL4A2-205ENST00000478681 PCF11O94913 1555 aaKnown RBP21.3■■□□□ 1
COL4A2-205ENST00000478681 CLIP1P30622 1438 aa21.29■■□□□ 1
COL4A2-205ENST00000478681 CCDC18Q5T9S5 1454 aa21.29■■□□□ 1
COL4A2-205ENST00000478681 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms