RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PRG4Q92954 1404 aaPredicted RBP32.26■■■□□ 2.76
SREBF1-212ENST00000478616 JPH4Q96JJ6 628 aa32.26■■■□□ 2.75
SREBF1-212ENST00000478616 KIAA0586Q9BVV6 1533 aa32.26■■■□□ 2.75
SREBF1-212ENST00000478616 RAPGEF2Q9Y4G8 1499 aa32.1■■■□□ 2.73
SREBF1-212ENST00000478616 IQGAP2Q13576 1575 aa32.05■■■□□ 2.72
SREBF1-212ENST00000478616 PRXQ9BXM0 1461 aa32.01■■■□□ 2.71
SREBF1-212ENST00000478616 ADCY10Q96PN6 1610 aa31.95■■■□□ 2.71
SREBF1-212ENST00000478616 DISP1Q96F81 1524 aa31.94■■■□□ 2.7
SREBF1-212ENST00000478616 TRHP20396 242 aaPredicted RBP31.93■■■□□ 2.7
SREBF1-212ENST00000478616 CTTNBP2Q8WZ74 1663 aa31.92■■■□□ 2.7
SREBF1-212ENST00000478616 UGGT2Q9NYU1 1516 aa31.9■■■□□ 2.7
SREBF1-212ENST00000478616 KIF13AQ9H1H9 1805 aa31.82■■■□□ 2.68
SREBF1-212ENST00000478616 KIAA0556O60303 1618 aa31.8■■■□□ 2.68
SREBF1-212ENST00000478616 PTPRGP23470 1445 aa31.79■■■□□ 2.68
SREBF1-212ENST00000478616 TNIKQ9UKE5 1360 aa31.79■■■□□ 2.68
SREBF1-212ENST00000478616 CARMIL2Q6F5E8 1435 aa31.78■■■□□ 2.68
SREBF1-212ENST00000478616 CHIC1Q5VXU3 224 aa31.77■■■□□ 2.68
SREBF1-212ENST00000478616 CSRNP3Q8WYN3 585 aa31.76■■■□□ 2.67
SREBF1-212ENST00000478616 MAPKBP1O60336 1514 aa31.73■■■□□ 2.67
SREBF1-212ENST00000478616 EEA1Q15075 1411 aa31.7■■■□□ 2.67
SREBF1-212ENST00000478616 TTBK1Q5TCY1 1321 aaPredicted RBP31.66■■■□□ 2.66
SREBF1-212ENST00000478616 UHRF1BP1LA0JNW5 1464 aa31.65■■■□□ 2.66
SREBF1-212ENST00000478616 DIP2BQ9P265 1576 aa31.62■■■□□ 2.65
SREBF1-212ENST00000478616 ABCC2Q92887 1545 aa31.61■■■□□ 2.65
SREBF1-212ENST00000478616 ABCC10Q5T3U5 1492 aa31.61■■■□□ 2.65
SREBF1-212ENST00000478616 UACAQ9BZF9 1416 aa31.6■■■□□ 2.65
SREBF1-212ENST00000478616 FAM9AQ8IZU1 332 aaPredicted RBP31.58■■■□□ 2.65
SREBF1-212ENST00000478616 KIF21BO75037 1637 aa31.57■■■□□ 2.64
SREBF1-212ENST00000478616 GOLGA3Q08378 1498 aa31.53■■■□□ 2.64
SREBF1-212ENST00000478616 SAMD9Q5K651 1589 aa31.52■■■□□ 2.64
SREBF1-212ENST00000478616 NPM1P06748 294 aaKnown RBP eCLIP31.52■■■□□ 2.64
SREBF1-212ENST00000478616 KDM5BQ9UGL1 1544 aa31.52■■■□□ 2.64
SREBF1-212ENST00000478616 PLB1Q6P1J6 1458 aa31.51■■■□□ 2.63
SREBF1-212ENST00000478616 ABCA8O94911 1581 aa31.51■■■□□ 2.63
SREBF1-212ENST00000478616 ZCCHC11Q5TAX3 1644 aaKnown RBP31.49■■■□□ 2.63
SREBF1-212ENST00000478616 ASXL2Q76L83 1435 aa31.44■■■□□ 2.62
SREBF1-212ENST00000478616 FAM69CQ0P6D2 419 aa31.44■■■□□ 2.62
SREBF1-212ENST00000478616 TSPOAP1O95153 1857 aa31.36■■■□□ 2.61
SREBF1-212ENST00000478616 P3H3Q8IVL6 736 aa31.36■■■□□ 2.61
SREBF1-212ENST00000478616 PPRC1Q5VV67 1664 aaKnown RBP31.35■■■□□ 2.61
SREBF1-212ENST00000478616 GLI2P10070 1586 aa31.34■■■□□ 2.61
SREBF1-212ENST00000478616 EPRSP07814 1512 aaKnown RBP31.29■■■□□ 2.6
SREBF1-212ENST00000478616 FHOD3Q2V2M9 1422 aa31.24■■■□□ 2.59
SREBF1-212ENST00000478616 MAP3K4Q9Y6R4 1608 aa31.24■■■□□ 2.59
SREBF1-212ENST00000478616 RAPGEF6Q8TEU7 1601 aa31.22■■■□□ 2.59
SREBF1-212ENST00000478616 WDR7Q9Y4E6 1490 aa31.21■■■□□ 2.59
SREBF1-212ENST00000478616 RANGAP1P46060 587 aaPredicted RBP31.2■■■□□ 2.59
SREBF1-212ENST00000478616 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
SREBF1-212ENST00000478616 ATP10BO94823 1461 aa31.2■■■□□ 2.58
SREBF1-212ENST00000478616 EFCAB5A4FU69 1503 aa31.19■■■□□ 2.58
SREBF1-212ENST00000478616 NUP153P49790 1475 aaKnown RBP31.14■■■□□ 2.57
SREBF1-212ENST00000478616 KDM6BO15054 1643 aa31.1■■■□□ 2.57
SREBF1-212ENST00000478616 ARHGAP35Q9NRY4 1499 aa31.09■■■□□ 2.57
SREBF1-212ENST00000478616 ARID3CA6NKF2 412 aa31.09■■■□□ 2.57
SREBF1-212ENST00000478616 UBTFP17480 764 aaKnown RBP31.08■■■□□ 2.57
SREBF1-212ENST00000478616 CFAP43Q8NDM7 1665 aa31.04■■■□□ 2.56
SREBF1-212ENST00000478616 COL17A1Q9UMD9 1497 aaPredicted RBP31.04■■■□□ 2.56
SREBF1-212ENST00000478616 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
SREBF1-212ENST00000478616 ABCA9Q8IUA7 1624 aa30.95■■■□□ 2.54
SREBF1-212ENST00000478616 MAGI3Q5TCQ9 1506 aa30.94■■■□□ 2.54
SREBF1-212ENST00000478616 CD109Q6YHK3 1445 aa30.92■■■□□ 2.54
SREBF1-212ENST00000478616 LRRIQ1Q96JM4 1722 aa30.9■■■□□ 2.54
SREBF1-212ENST00000478616 TEX14Q8IWB6 1497 aa30.9■■■□□ 2.54
SREBF1-212ENST00000478616 CDK13Q14004 1512 aaKnown RBP30.89■■■□□ 2.54
SREBF1-212ENST00000478616 FMN1Q68DA7 1419 aa30.82■■■□□ 2.52
SREBF1-212ENST00000478616 HECW1Q76N89 1606 aa30.8■■■□□ 2.52
SREBF1-212ENST00000478616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.76■■■□□ 2.51
SREBF1-212ENST00000478616 HNRNPUL2Q1KMD3 747 aaKnown RBP30.76■■■□□ 2.51
SREBF1-212ENST00000478616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.75■■■□□ 2.513e-8■□□□□ 10.1
SREBF1-212ENST00000478616 PCF11O94913 1555 aaKnown RBP30.74■■■□□ 2.51
SREBF1-212ENST00000478616 TTC37Q6PGP7 1564 aa30.74■■■□□ 2.51
SREBF1-212ENST00000478616 ARAP3Q8WWN8 1544 aa30.69■■■□□ 2.5
SREBF1-212ENST00000478616 PLEKHD1A6NEE1 506 aa30.69■■■□□ 2.5
SREBF1-212ENST00000478616 CLIP1P30622 1438 aa30.68■■■□□ 2.5
SREBF1-212ENST00000478616 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
SREBF1-212ENST00000478616 KIF14Q15058 1648 aa30.64■■■□□ 2.5
SREBF1-212ENST00000478616 NEO1Q92859 1461 aa30.63■■■□□ 2.49
SREBF1-212ENST00000478616 FRMPD1Q5SYB0 1578 aa30.62■■■□□ 2.49
SREBF1-212ENST00000478616 KDM4FA0A1W2PPD8 638 aa30.61■■■□□ 2.49
SREBF1-212ENST00000478616 ATP1B4Q9UN42 357 aaPredicted RBP30.59■■■□□ 2.49
SREBF1-212ENST00000478616 TROQ12816 1431 aaPredicted RBP30.55■■■□□ 2.48
SREBF1-212ENST00000478616 PHLDB1Q86UU1 1377 aa30.54■■■□□ 2.48
SREBF1-212ENST00000478616 FYCO1Q9BQS8 1478 aa30.54■■■□□ 2.48
SREBF1-212ENST00000478616 RICTORQ6R327 1708 aa30.52■■■□□ 2.48
SREBF1-212ENST00000478616 CEP162Q5TB80 1403 aa30.5■■■□□ 2.47
SREBF1-212ENST00000478616 MYO5CQ9NQX4 1742 aa30.5■■■□□ 2.47
SREBF1-212ENST00000478616 FANCAO15360 1455 aa30.5■■■□□ 2.47
SREBF1-212ENST00000478616 RAPGEF3O95398 923 aa30.49■■■□□ 2.47
SREBF1-212ENST00000478616 CCDC18Q5T9S5 1454 aa30.49■■■□□ 2.47
SREBF1-212ENST00000478616 PLCH2O75038 1416 aa30.48■■■□□ 2.47
SREBF1-212ENST00000478616 AKNAQ7Z591 1439 aa30.48■■■□□ 2.47
SREBF1-212ENST00000478616 LOC105371045A0A1W2PR82 267 aa30.48■■■□□ 2.47
SREBF1-212ENST00000478616 CFAP74Q9C0B2 1584 aa30.47■■■□□ 2.47
SREBF1-212ENST00000478616 ADGRL1O94910 1474 aa30.46■■■□□ 2.47
SREBF1-212ENST00000478616 AEBP2Q6ZN18 517 aaPredicted RBP30.46■■■□□ 2.47
SREBF1-212ENST00000478616 CDC42BPBQ9Y5S2 1711 aa30.43■■■□□ 2.46
SREBF1-212ENST00000478616 CDK11AQ9UQ88 783 aaPredicted RBP30.4■■■□□ 2.46
SREBF1-212ENST00000478616 DENND4BO75064 1496 aaPredicted RBP30.38■■■□□ 2.45
SREBF1-212ENST00000478616 CDC42BPAQ5VT25 1732 aa30.36■■■□□ 2.45
SREBF1-212ENST00000478616 ZMYM4Q5VZL5 1548 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms