RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 PRG4Q92954 1404 aaPredicted RBP32.74■■■□□ 2.83
EPHB4-205ENST00000478459 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
EPHB4-205ENST00000478459 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
EPHB4-205ENST00000478459 KIAA0586Q9BVV6 1533 aa32.57■■■□□ 2.8
EPHB4-205ENST00000478459 TTBK1Q5TCY1 1321 aaPredicted RBP32.52■■■□□ 2.8
EPHB4-205ENST00000478459 RAPGEF2Q9Y4G8 1499 aa32.41■■■□□ 2.78
EPHB4-205ENST00000478459 IQGAP2Q13576 1575 aa32.4■■■□□ 2.78
EPHB4-205ENST00000478459 ADCY10Q96PN6 1610 aa32.33■■■□□ 2.77
EPHB4-205ENST00000478459 PTPRGP23470 1445 aa32.26■■■□□ 2.75
EPHB4-205ENST00000478459 NPM1P06748 294 aaKnown RBP eCLIP32.25■■■□□ 2.75
EPHB4-205ENST00000478459 CARMIL2Q6F5E8 1435 aa32.25■■■□□ 2.75
EPHB4-205ENST00000478459 KIF13AQ9H1H9 1805 aa32.24■■■□□ 2.75
EPHB4-205ENST00000478459 CTTNBP2Q8WZ74 1663 aa32.23■■■□□ 2.75
EPHB4-205ENST00000478459 DISP1Q96F81 1524 aa32.2■■■□□ 2.74
EPHB4-205ENST00000478459 TNIKQ9UKE5 1360 aa32.19■■■□□ 2.74
EPHB4-205ENST00000478459 FAM9AQ8IZU1 332 aaPredicted RBP32.16■■■□□ 2.74
EPHB4-205ENST00000478459 PRXQ9BXM0 1461 aa32.14■■■□□ 2.74
EPHB4-205ENST00000478459 UGGT2Q9NYU1 1516 aa32.14■■■□□ 2.74
EPHB4-205ENST00000478459 KIAA0556O60303 1618 aa32.11■■■□□ 2.73
EPHB4-205ENST00000478459 FAM69CQ0P6D2 419 aa32.1■■■□□ 2.73
EPHB4-205ENST00000478459 MAPKBP1O60336 1514 aa32.07■■■□□ 2.72
EPHB4-205ENST00000478459 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
EPHB4-205ENST00000478459 ABCC10Q5T3U5 1492 aa32.03■■■□□ 2.72
EPHB4-205ENST00000478459 DIP2BQ9P265 1576 aa32.02■■■□□ 2.72
EPHB4-205ENST00000478459 TSPOAP1O95153 1857 aa32■■■□□ 2.71
EPHB4-205ENST00000478459 UACAQ9BZF9 1416 aa32■■■□□ 2.71
EPHB4-205ENST00000478459 ABCC2Q92887 1545 aa31.99■■■□□ 2.71
EPHB4-205ENST00000478459 P3H3Q8IVL6 736 aa31.96■■■□□ 2.71
EPHB4-205ENST00000478459 RANGAP1P46060 587 aaPredicted RBP31.95■■■□□ 2.71
EPHB4-205ENST00000478459 EHMT2Q96KQ7 1210 aa31.95■■■□□ 2.71
EPHB4-205ENST00000478459 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
EPHB4-205ENST00000478459 UHRF1BP1LA0JNW5 1464 aa31.91■■■□□ 2.7
EPHB4-205ENST00000478459 ASXL2Q76L83 1435 aa31.9■■■□□ 2.7
EPHB4-205ENST00000478459 GOLGA3Q08378 1498 aa31.9■■■□□ 2.7
EPHB4-205ENST00000478459 PLB1Q6P1J6 1458 aa31.89■■■□□ 2.7
EPHB4-205ENST00000478459 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
EPHB4-205ENST00000478459 EEA1Q15075 1411 aa31.86■■■□□ 2.69
EPHB4-205ENST00000478459 KDM5BQ9UGL1 1544 aa31.8■■■□□ 2.68
EPHB4-205ENST00000478459 ARID3CA6NKF2 412 aa31.8■■■□□ 2.68
EPHB4-205ENST00000478459 ABCA8O94911 1581 aa31.75■■■□□ 2.67
EPHB4-205ENST00000478459 SAMD9Q5K651 1589 aa31.71■■■□□ 2.67
EPHB4-205ENST00000478459 KIF21BO75037 1637 aa31.71■■■□□ 2.67
EPHB4-205ENST00000478459 KDM6BO15054 1643 aa31.68■■■□□ 2.66
EPHB4-205ENST00000478459 EPRSP07814 1512 aaKnown RBP31.68■■■□□ 2.66
EPHB4-205ENST00000478459 PPRC1Q5VV67 1664 aaKnown RBP31.67■■■□□ 2.66
EPHB4-205ENST00000478459 GLI2P10070 1586 aa31.65■■■□□ 2.66
EPHB4-205ENST00000478459 KCNH8Q96L42 1107 aa31.64■■■□□ 2.66
EPHB4-205ENST00000478459 FHOD3Q2V2M9 1422 aa31.62■■■□□ 2.65
EPHB4-205ENST00000478459 WDR7Q9Y4E6 1490 aa31.61■■■□□ 2.65
EPHB4-205ENST00000478459 UBTFP17480 764 aaKnown RBP31.59■■■□□ 2.65
EPHB4-205ENST00000478459 MAP3K4Q9Y6R4 1608 aa31.59■■■□□ 2.65
EPHB4-205ENST00000478459 RAPGEF6Q8TEU7 1601 aa31.55■■■□□ 2.64
EPHB4-205ENST00000478459 AEBP2Q6ZN18 517 aaPredicted RBP31.54■■■□□ 2.64
EPHB4-205ENST00000478459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.52■■■□□ 2.64
EPHB4-205ENST00000478459 HNRNPUL2Q1KMD3 747 aaKnown RBP31.52■■■□□ 2.64
EPHB4-205ENST00000478459 ATP10BO94823 1461 aa31.52■■■□□ 2.64
EPHB4-205ENST00000478459 CFAP43Q8NDM7 1665 aa31.41■■■□□ 2.62
EPHB4-205ENST00000478459 EFCAB5A4FU69 1503 aa31.41■■■□□ 2.62
EPHB4-205ENST00000478459 CD109Q6YHK3 1445 aa31.41■■■□□ 2.62
EPHB4-205ENST00000478459 NUP153P49790 1475 aaKnown RBP31.4■■■□□ 2.62
EPHB4-205ENST00000478459 COL17A1Q9UMD9 1497 aaPredicted RBP31.4■■■□□ 2.62
EPHB4-205ENST00000478459 TEX14Q8IWB6 1497 aa31.39■■■□□ 2.62
EPHB4-205ENST00000478459 ATP1B4Q9UN42 357 aaPredicted RBP31.34■■■□□ 2.61
EPHB4-205ENST00000478459 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
EPHB4-205ENST00000478459 MAGI3Q5TCQ9 1506 aa31.27■■■□□ 2.6
EPHB4-205ENST00000478459 CDK13Q14004 1512 aaKnown RBP31.25■■■□□ 2.59
EPHB4-205ENST00000478459 ABCA9Q8IUA7 1624 aa31.24■■■□□ 2.59
EPHB4-205ENST00000478459 KDM4FA0A1W2PPD8 638 aa31.18■■■□□ 2.58
EPHB4-205ENST00000478459 PLEKHD1A6NEE1 506 aa31.18■■■□□ 2.58
EPHB4-205ENST00000478459 FMN1Q68DA7 1419 aa31.13■■■□□ 2.57
EPHB4-205ENST00000478459 HECW1Q76N89 1606 aa31.12■■■□□ 2.57
EPHB4-205ENST00000478459 LRRIQ1Q96JM4 1722 aa31.09■■■□□ 2.57
EPHB4-205ENST00000478459 TTC37Q6PGP7 1564 aa31.08■■■□□ 2.57
EPHB4-205ENST00000478459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.06■■■□□ 2.56
EPHB4-205ENST00000478459 ADGRL1O94910 1474 aa31.04■■■□□ 2.56
EPHB4-205ENST00000478459 RAPGEF3O95398 923 aa31.03■■■□□ 2.56
EPHB4-205ENST00000478459 ARAP3Q8WWN8 1544 aa31.02■■■□□ 2.56
EPHB4-205ENST00000478459 PCF11O94913 1555 aaKnown RBP31■■■□□ 2.55
EPHB4-205ENST00000478459 NEO1Q92859 1461 aa30.96■■■□□ 2.55
EPHB4-205ENST00000478459 CLIP1P30622 1438 aa30.96■■■□□ 2.55
EPHB4-205ENST00000478459 KIF14Q15058 1648 aa30.95■■■□□ 2.55
EPHB4-205ENST00000478459 FANCAO15360 1455 aa30.92■■■□□ 2.54
EPHB4-205ENST00000478459 FRMPD1Q5SYB0 1578 aa30.92■■■□□ 2.54
EPHB4-205ENST00000478459 AKNAQ7Z591 1439 aa30.9■■■□□ 2.54
EPHB4-205ENST00000478459 CDK11AQ9UQ88 783 aaPredicted RBP30.89■■■□□ 2.54
EPHB4-205ENST00000478459 PHLDB1Q86UU1 1377 aa30.89■■■□□ 2.54
EPHB4-205ENST00000478459 CASKIN1Q8WXD9 1431 aa30.87■■■□□ 2.53
EPHB4-205ENST00000478459 CFAP74Q9C0B2 1584 aa30.86■■■□□ 2.53
EPHB4-205ENST00000478459 MYO5CQ9NQX4 1742 aa30.86■■■□□ 2.53
EPHB4-205ENST00000478459 RICTORQ6R327 1708 aa30.84■■■□□ 2.53
EPHB4-205ENST00000478459 TROQ12816 1431 aaPredicted RBP30.83■■■□□ 2.53
EPHB4-205ENST00000478459 DENND4BO75064 1496 aaPredicted RBP30.82■■■□□ 2.53
EPHB4-205ENST00000478459 PLCH2O75038 1416 aa30.8■■■□□ 2.52
EPHB4-205ENST00000478459 LOC105371045A0A1W2PR82 267 aa30.78■■■□□ 2.52
EPHB4-205ENST00000478459 CCDC18Q5T9S5 1454 aa30.77■■■□□ 2.52
EPHB4-205ENST00000478459 FYCO1Q9BQS8 1478 aa30.76■■■□□ 2.52
EPHB4-205ENST00000478459 ARID4BQ4LE39 1312 aaPredicted RBP30.73■■■□□ 2.51
EPHB4-205ENST00000478459 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
EPHB4-205ENST00000478459 ARHGAP5Q13017 1502 aa30.73■■■□□ 2.51
EPHB4-205ENST00000478459 CEP162Q5TB80 1403 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms