RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 EEA1Q15075 1411 aa13.35□□□□□ -0.27
DDX39B-218ENST00000478365 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
DDX39B-218ENST00000478365 KIAA0586Q9BVV6 1533 aa13.34□□□□□ -0.27
DDX39B-218ENST00000478365 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
DDX39B-218ENST00000478365 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
DDX39B-218ENST00000478365 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
DDX39B-218ENST00000478365 JPH4Q96JJ6 628 aa13.29□□□□□ -0.28
DDX39B-218ENST00000478365 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
DDX39B-218ENST00000478365 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
DDX39B-218ENST00000478365 PRXQ9BXM0 1461 aa13.25□□□□□ -0.29
DDX39B-218ENST00000478365 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
DDX39B-218ENST00000478365 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
DDX39B-218ENST00000478365 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
DDX39B-218ENST00000478365 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
DDX39B-218ENST00000478365 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
DDX39B-218ENST00000478365 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
DDX39B-218ENST00000478365 TNIKQ9UKE5 1360 aa13.16□□□□□ -0.3
DDX39B-218ENST00000478365 KIF21BO75037 1637 aa13.15□□□□□ -0.3
DDX39B-218ENST00000478365 PTPRGP23470 1445 aa13.13□□□□□ -0.31
DDX39B-218ENST00000478365 FOXD1Q16676 465 aa13.13□□□□□ -0.31
DDX39B-218ENST00000478365 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-218ENST00000478365 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
DDX39B-218ENST00000478365 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
DDX39B-218ENST00000478365 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDX39B-218ENST00000478365 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
DDX39B-218ENST00000478365 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
DDX39B-218ENST00000478365 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
DDX39B-218ENST00000478365 UACAQ9BZF9 1416 aa13.05□□□□□ -0.32
DDX39B-218ENST00000478365 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
DDX39B-218ENST00000478365 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
DDX39B-218ENST00000478365 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
DDX39B-218ENST00000478365 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
DDX39B-218ENST00000478365 KDM5BQ9UGL1 1544 aa12.98□□□□□ -0.33
DDX39B-218ENST00000478365 PLB1Q6P1J6 1458 aa12.98□□□□□ -0.33
DDX39B-218ENST00000478365 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
DDX39B-218ENST00000478365 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-218ENST00000478365 ABCA8O94911 1581 aa12.97□□□□□ -0.33
DDX39B-218ENST00000478365 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
DDX39B-218ENST00000478365 KIF13AQ9H1H9 1805 aa12.93□□□□□ -0.34
DDX39B-218ENST00000478365 DIP2BQ9P265 1576 aa12.93□□□□□ -0.34
DDX39B-218ENST00000478365 ZCCHC11Q5TAX3 1644 aaKnown RBP12.92□□□□□ -0.34
DDX39B-218ENST00000478365 ASXL2Q76L83 1435 aa12.92□□□□□ -0.34
DDX39B-218ENST00000478365 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
DDX39B-218ENST00000478365 GLI2P10070 1586 aa12.9□□□□□ -0.34
DDX39B-218ENST00000478365 FMN1Q68DA7 1419 aa12.9□□□□□ -0.34
DDX39B-218ENST00000478365 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
DDX39B-218ENST00000478365 WDR7Q9Y4E6 1490 aa12.89□□□□□ -0.35
DDX39B-218ENST00000478365 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
DDX39B-218ENST00000478365 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
DDX39B-218ENST00000478365 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
DDX39B-218ENST00000478365 EPRSP07814 1512 aaKnown RBP12.85□□□□□ -0.35
DDX39B-218ENST00000478365 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
DDX39B-218ENST00000478365 ATP10BO94823 1461 aa12.83□□□□□ -0.36
DDX39B-218ENST00000478365 NUP153P49790 1475 aaKnown RBP12.83□□□□□ -0.36
DDX39B-218ENST00000478365 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
DDX39B-218ENST00000478365 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
DDX39B-218ENST00000478365 TEX14Q8IWB6 1497 aa12.82□□□□□ -0.36
DDX39B-218ENST00000478365 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
DDX39B-218ENST00000478365 CLIP1P30622 1438 aa12.8□□□□□ -0.36
DDX39B-218ENST00000478365 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
DDX39B-218ENST00000478365 TSPOAP1O95153 1857 aa12.78□□□□□ -0.36
DDX39B-218ENST00000478365 PLEKHD1A6NEE1 506 aa12.77□□□□□ -0.37
DDX39B-218ENST00000478365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-218ENST00000478365 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
DDX39B-218ENST00000478365 CDK11AQ9UQ88 783 aaPredicted RBP12.77□□□□□ -0.37
DDX39B-218ENST00000478365 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
DDX39B-218ENST00000478365 MAGI3Q5TCQ9 1506 aa12.76□□□□□ -0.37
DDX39B-218ENST00000478365 CD109Q6YHK3 1445 aa12.75□□□□□ -0.37
DDX39B-218ENST00000478365 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
DDX39B-218ENST00000478365 FYCO1Q9BQS8 1478 aa12.75□□□□□ -0.37
DDX39B-218ENST00000478365 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
DDX39B-218ENST00000478365 KDM6BO15054 1643 aa12.74□□□□□ -0.37
DDX39B-218ENST00000478365 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
DDX39B-218ENST00000478365 PHLDB1Q86UU1 1377 aa12.74□□□□□ -0.37
DDX39B-218ENST00000478365 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
DDX39B-218ENST00000478365 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
DDX39B-218ENST00000478365 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
DDX39B-218ENST00000478365 PCF11O94913 1555 aaKnown RBP12.7□□□□□ -0.38
DDX39B-218ENST00000478365 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-218ENST00000478365 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
DDX39B-218ENST00000478365 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
DDX39B-218ENST00000478365 NEO1Q92859 1461 aa12.68□□□□□ -0.38
DDX39B-218ENST00000478365 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-218ENST00000478365 KIF14Q15058 1648 aa12.67□□□□□ -0.38
DDX39B-218ENST00000478365 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
DDX39B-218ENST00000478365 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX39B-218ENST00000478365 LRRIQ1Q96JM4 1722 aa12.62□□□□□ -0.39
DDX39B-218ENST00000478365 TTC37Q6PGP7 1564 aa12.62□□□□□ -0.39
DDX39B-218ENST00000478365 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
DDX39B-218ENST00000478365 PLCH2O75038 1416 aa12.61□□□□□ -0.39
DDX39B-218ENST00000478365 FANCAO15360 1455 aa12.6□□□□□ -0.39
DDX39B-218ENST00000478365 VPS8Q8N3P4 1428 aa12.6□□□□□ -0.39
DDX39B-218ENST00000478365 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
DDX39B-218ENST00000478365 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
DDX39B-218ENST00000478365 MTUS2Q5JR59 1369 aa12.57□□□□□ -0.4
DDX39B-218ENST00000478365 AKNAQ7Z591 1439 aa12.57□□□□□ -0.4
DDX39B-218ENST00000478365 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
DDX39B-218ENST00000478365 DENND4BO75064 1496 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-218ENST00000478365 COL17A1Q9UMD9 1497 aaPredicted RBP12.57□□□□□ -0.4
DDX39B-218ENST00000478365 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms