RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
ABCF3-212ENST00000478288 IGF1RP08069 1367 aa22.82■■□□□ 1.24
ABCF3-212ENST00000478288 KIAA0586Q9BVV6 1533 aa22.8■■□□□ 1.24
ABCF3-212ENST00000478288 KIF13AQ9H1H9 1805 aa22.79■■□□□ 1.24
ABCF3-212ENST00000478288 MAPKBP1O60336 1514 aa22.72■■□□□ 1.23
ABCF3-212ENST00000478288 ADCY10Q96PN6 1610 aa22.7■■□□□ 1.22
ABCF3-212ENST00000478288 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
ABCF3-212ENST00000478288 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
ABCF3-212ENST00000478288 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
ABCF3-212ENST00000478288 DIP2BQ9P265 1576 aa22.61■■□□□ 1.21
ABCF3-212ENST00000478288 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
ABCF3-212ENST00000478288 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
ABCF3-212ENST00000478288 FAM69CQ0P6D2 419 aa22.54■■□□□ 1.2
ABCF3-212ENST00000478288 PTPRGP23470 1445 aa22.54■■□□□ 1.2
ABCF3-212ENST00000478288 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
ABCF3-212ENST00000478288 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
ABCF3-212ENST00000478288 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
ABCF3-212ENST00000478288 ABCC2Q92887 1545 aa22.48■■□□□ 1.19
ABCF3-212ENST00000478288 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
ABCF3-212ENST00000478288 DISP1Q96F81 1524 aa22.47■■□□□ 1.19
ABCF3-212ENST00000478288 UGGT2Q9NYU1 1516 aa22.46■■□□□ 1.19
ABCF3-212ENST00000478288 TSPOAP1O95153 1857 aa22.41■■□□□ 1.18
ABCF3-212ENST00000478288 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
ABCF3-212ENST00000478288 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
ABCF3-212ENST00000478288 KDM6BO15054 1643 aa22.39■■□□□ 1.18
ABCF3-212ENST00000478288 GLI2P10070 1586 aa22.38■■□□□ 1.17
ABCF3-212ENST00000478288 KIAA0556O60303 1618 aa22.38■■□□□ 1.17
ABCF3-212ENST00000478288 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
ABCF3-212ENST00000478288 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
ABCF3-212ENST00000478288 KDM5BQ9UGL1 1544 aa22.35■■□□□ 1.17
ABCF3-212ENST00000478288 PPRC1Q5VV67 1664 aaKnown RBP22.31■■□□□ 1.16
ABCF3-212ENST00000478288 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
ABCF3-212ENST00000478288 ZCCHC11Q5TAX3 1644 aaKnown RBP22.28■■□□□ 1.16
ABCF3-212ENST00000478288 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
ABCF3-212ENST00000478288 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
ABCF3-212ENST00000478288 MAP3K4Q9Y6R4 1608 aa22.25■■□□□ 1.15
ABCF3-212ENST00000478288 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
ABCF3-212ENST00000478288 TEX14Q8IWB6 1497 aa22.18■■□□□ 1.14
ABCF3-212ENST00000478288 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
ABCF3-212ENST00000478288 ABCA8O94911 1581 aa22.17■■□□□ 1.14
ABCF3-212ENST00000478288 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
ABCF3-212ENST00000478288 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
ABCF3-212ENST00000478288 COL17A1Q9UMD9 1497 aaPredicted RBP22.09■■□□□ 1.13
ABCF3-212ENST00000478288 MAGI3Q5TCQ9 1506 aa22.06■■□□□ 1.12
ABCF3-212ENST00000478288 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
ABCF3-212ENST00000478288 EEA1Q15075 1411 aa22.02■■□□□ 1.12
ABCF3-212ENST00000478288 CD109Q6YHK3 1445 aa22■■□□□ 1.11
ABCF3-212ENST00000478288 CSRNP3Q8WYN3 585 aa22■■□□□ 1.11
ABCF3-212ENST00000478288 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
ABCF3-212ENST00000478288 ADGRL1O94910 1474 aa21.98■■□□□ 1.11
ABCF3-212ENST00000478288 ATP10BO94823 1461 aa21.95■■□□□ 1.1
ABCF3-212ENST00000478288 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
ABCF3-212ENST00000478288 KCNH8Q96L42 1107 aa21.92■■□□□ 1.1
ABCF3-212ENST00000478288 ABCA9Q8IUA7 1624 aa21.91■■□□□ 1.1
ABCF3-212ENST00000478288 ARAP3Q8WWN8 1544 aa21.89■■□□□ 1.09
ABCF3-212ENST00000478288 P3H3Q8IVL6 736 aa21.87■■□□□ 1.09
ABCF3-212ENST00000478288 PHLDB1Q86UU1 1377 aa21.87■■□□□ 1.09
ABCF3-212ENST00000478288 KIF21BO75037 1637 aa21.85■■□□□ 1.09
ABCF3-212ENST00000478288 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.08
ABCF3-212ENST00000478288 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
ABCF3-212ENST00000478288 NEO1Q92859 1461 aa21.8■■□□□ 1.08
ABCF3-212ENST00000478288 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
ABCF3-212ENST00000478288 FHOD3Q2V2M9 1422 aa21.78■■□□□ 1.08
ABCF3-212ENST00000478288 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
ABCF3-212ENST00000478288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
ABCF3-212ENST00000478288 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
ABCF3-212ENST00000478288 FRMPD1Q5SYB0 1578 aa21.69■■□□□ 1.06
ABCF3-212ENST00000478288 CFAP74Q9C0B2 1584 aa21.67■■□□□ 1.06
ABCF3-212ENST00000478288 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
ABCF3-212ENST00000478288 RANGAP1P46060 587 aaPredicted RBP21.64■■□□□ 1.05
ABCF3-212ENST00000478288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.64■■□□□ 1.05
ABCF3-212ENST00000478288 ADAMTSL3P82987 1691 aa21.63■■□□□ 1.05
ABCF3-212ENST00000478288 RICTORQ6R327 1708 aa21.63■■□□□ 1.05
ABCF3-212ENST00000478288 RAPGEF3O95398 923 aa21.62■■□□□ 1.05
ABCF3-212ENST00000478288 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
ABCF3-212ENST00000478288 ARHGEF40Q8TER5 1519 aa21.6■■□□□ 1.05
ABCF3-212ENST00000478288 FANCAO15360 1455 aa21.6■■□□□ 1.05
ABCF3-212ENST00000478288 DENND4BO75064 1496 aaPredicted RBP21.59■■□□□ 1.05
ABCF3-212ENST00000478288 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
ABCF3-212ENST00000478288 BCORL1Q5H9F3 1711 aa21.58■■□□□ 1.05
ABCF3-212ENST00000478288 AKNAQ7Z591 1439 aa21.58■■□□□ 1.05
ABCF3-212ENST00000478288 HECW1Q76N89 1606 aa21.58■■□□□ 1.04
ABCF3-212ENST00000478288 CDK13Q14004 1512 aaKnown RBP21.57■■□□□ 1.04
ABCF3-212ENST00000478288 ZMYM4Q5VZL5 1548 aa21.57■■□□□ 1.04
ABCF3-212ENST00000478288 PTPRMP28827 1452 aa21.55■■□□□ 1.04
ABCF3-212ENST00000478288 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
ABCF3-212ENST00000478288 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
ABCF3-212ENST00000478288 UBTFP17480 764 aaKnown RBP21.52■■□□□ 1.04
ABCF3-212ENST00000478288 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.03
ABCF3-212ENST00000478288 PLCH2O75038 1416 aa21.5■■□□□ 1.03
ABCF3-212ENST00000478288 MADDQ8WXG6 1647 aa21.5■■□□□ 1.03
ABCF3-212ENST00000478288 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
ABCF3-212ENST00000478288 ZFYVE16Q7Z3T8 1539 aa21.47■■□□□ 1.03
ABCF3-212ENST00000478288 CDK11AQ9UQ88 783 aaPredicted RBP21.46■■□□□ 1.03
ABCF3-212ENST00000478288 POGZQ7Z3K3 1410 aa21.46■■□□□ 1.03
ABCF3-212ENST00000478288 KIF14Q15058 1648 aa21.44■■□□□ 1.02
ABCF3-212ENST00000478288 ARID4BQ4LE39 1312 aaPredicted RBP21.44■■□□□ 1.02
ABCF3-212ENST00000478288 ILDR1Q86SU0 546 aaPredicted RBP21.43■■□□□ 1.02
ABCF3-212ENST00000478288 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
ABCF3-212ENST00000478288 LRRIQ1Q96JM4 1722 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms