RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 PRG4Q92954 1404 aaPredicted RBP25.42■■□□□ 1.66
SNX21-210ENST00000478230 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
SNX21-210ENST00000478230 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
SNX21-210ENST00000478230 ERCC6L2Q5T890 1561 aa25.32■■□□□ 1.64
SNX21-210ENST00000478230 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
SNX21-210ENST00000478230 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
SNX21-210ENST00000478230 EEA1Q15075 1411 aa25.25■■□□□ 1.63
SNX21-210ENST00000478230 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
SNX21-210ENST00000478230 IQGAP2Q13576 1575 aa25.22■■□□□ 1.63
SNX21-210ENST00000478230 NPM1P06748 294 aaKnown RBP eCLIP25.2■■□□□ 1.62
SNX21-210ENST00000478230 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
SNX21-210ENST00000478230 PTPRGP23470 1445 aa25.15■■□□□ 1.62
SNX21-210ENST00000478230 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
SNX21-210ENST00000478230 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
SNX21-210ENST00000478230 UGGT2Q9NYU1 1516 aa25.09■■□□□ 1.61
SNX21-210ENST00000478230 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
SNX21-210ENST00000478230 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
SNX21-210ENST00000478230 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
SNX21-210ENST00000478230 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
SNX21-210ENST00000478230 DISP1Q96F81 1524 aa25.02■■□□□ 1.6
SNX21-210ENST00000478230 ADCY10Q96PN6 1610 aa24.95■■□□□ 1.58
SNX21-210ENST00000478230 UACAQ9BZF9 1416 aa24.95■■□□□ 1.58
SNX21-210ENST00000478230 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
SNX21-210ENST00000478230 UHRF1BP1LA0JNW5 1464 aa24.92■■□□□ 1.58
SNX21-210ENST00000478230 MAPKBP1O60336 1514 aa24.91■■□□□ 1.58
SNX21-210ENST00000478230 ABCC2Q92887 1545 aa24.89■■□□□ 1.57
SNX21-210ENST00000478230 FAM69CQ0P6D2 419 aa24.86■■□□□ 1.57
SNX21-210ENST00000478230 KIF21BO75037 1637 aa24.85■■□□□ 1.57
SNX21-210ENST00000478230 ABCC10Q5T3U5 1492 aa24.84■■□□□ 1.57
SNX21-210ENST00000478230 PLB1Q6P1J6 1458 aa24.81■■□□□ 1.56
SNX21-210ENST00000478230 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
SNX21-210ENST00000478230 KDM5BQ9UGL1 1544 aa24.77■■□□□ 1.56
SNX21-210ENST00000478230 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
SNX21-210ENST00000478230 ASXL2Q76L83 1435 aa24.75■■□□□ 1.55
SNX21-210ENST00000478230 KIF13AQ9H1H9 1805 aa24.72■■□□□ 1.55
SNX21-210ENST00000478230 DIP2BQ9P265 1576 aa24.71■■□□□ 1.55
SNX21-210ENST00000478230 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
SNX21-210ENST00000478230 ABCA8O94911 1581 aa24.7■■□□□ 1.54
SNX21-210ENST00000478230 SAMD9Q5K651 1589 aa24.7■■□□□ 1.54
SNX21-210ENST00000478230 EFCAB5A4FU69 1503 aa24.66■■□□□ 1.54
SNX21-210ENST00000478230 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
SNX21-210ENST00000478230 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
SNX21-210ENST00000478230 GLI2P10070 1586 aa24.62■■□□□ 1.53
SNX21-210ENST00000478230 WDR7Q9Y4E6 1490 aa24.59■■□□□ 1.53
SNX21-210ENST00000478230 EPRSP07814 1512 aaKnown RBP24.58■■□□□ 1.53
SNX21-210ENST00000478230 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
SNX21-210ENST00000478230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
SNX21-210ENST00000478230 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
SNX21-210ENST00000478230 RAPGEF6Q8TEU7 1601 aa24.54■■□□□ 1.52
SNX21-210ENST00000478230 ATP10BO94823 1461 aa24.53■■□□□ 1.52
SNX21-210ENST00000478230 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
SNX21-210ENST00000478230 ARID3CA6NKF2 412 aa24.5■■□□□ 1.51
SNX21-210ENST00000478230 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
SNX21-210ENST00000478230 TEX14Q8IWB6 1497 aa24.5■■□□□ 1.51
SNX21-210ENST00000478230 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
SNX21-210ENST00000478230 PLEKHD1A6NEE1 506 aa24.46■■□□□ 1.51
SNX21-210ENST00000478230 NUP153P49790 1475 aaKnown RBP24.44■■□□□ 1.5
SNX21-210ENST00000478230 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
SNX21-210ENST00000478230 ARHGAP35Q9NRY4 1499 aa24.43■■□□□ 1.5
SNX21-210ENST00000478230 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
SNX21-210ENST00000478230 KDM6BO15054 1643 aa24.42■■□□□ 1.5
SNX21-210ENST00000478230 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.49
SNX21-210ENST00000478230 CFAP43Q8NDM7 1665 aa24.38■■□□□ 1.49
SNX21-210ENST00000478230 CDK11AQ9UQ88 783 aaPredicted RBP24.38■■□□□ 1.49
SNX21-210ENST00000478230 MAGI3Q5TCQ9 1506 aa24.37■■□□□ 1.49
SNX21-210ENST00000478230 PPRC1Q5VV67 1664 aaKnown RBP24.34■■□□□ 1.49
SNX21-210ENST00000478230 PHLDB1Q86UU1 1377 aa24.32■■□□□ 1.48
SNX21-210ENST00000478230 HECW1Q76N89 1606 aa24.31■■□□□ 1.48
SNX21-210ENST00000478230 CLIP1P30622 1438 aa24.3■■□□□ 1.48
SNX21-210ENST00000478230 ABCA9Q8IUA7 1624 aa24.28■■□□□ 1.48
SNX21-210ENST00000478230 AEBP2Q6ZN18 517 aaPredicted RBP24.24■■□□□ 1.47
SNX21-210ENST00000478230 CASKIN1Q8WXD9 1431 aa24.22■■□□□ 1.47
SNX21-210ENST00000478230 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
SNX21-210ENST00000478230 NEO1Q92859 1461 aa24.19■■□□□ 1.46
SNX21-210ENST00000478230 COL17A1Q9UMD9 1497 aaPredicted RBP24.19■■□□□ 1.46
SNX21-210ENST00000478230 CCDC18Q5T9S5 1454 aa24.18■■□□□ 1.46
SNX21-210ENST00000478230 ARAP3Q8WWN8 1544 aa24.16■■□□□ 1.46
SNX21-210ENST00000478230 FYCO1Q9BQS8 1478 aa24.14■■□□□ 1.46
SNX21-210ENST00000478230 TROQ12816 1431 aaPredicted RBP24.13■■□□□ 1.45
SNX21-210ENST00000478230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.12■■□□□ 1.45
SNX21-210ENST00000478230 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
SNX21-210ENST00000478230 PCF11O94913 1555 aaKnown RBP24.09■■□□□ 1.45
SNX21-210ENST00000478230 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.45
SNX21-210ENST00000478230 FANCAO15360 1455 aa24.07■■□□□ 1.44
SNX21-210ENST00000478230 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
SNX21-210ENST00000478230 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
SNX21-210ENST00000478230 PLCH2O75038 1416 aa24.07■■□□□ 1.44
SNX21-210ENST00000478230 AKNAQ7Z591 1439 aa24.06■■□□□ 1.44
SNX21-210ENST00000478230 KIF14Q15058 1648 aa24.06■■□□□ 1.44
SNX21-210ENST00000478230 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
SNX21-210ENST00000478230 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
SNX21-210ENST00000478230 RAPGEF3O95398 923 aa24.02■■□□□ 1.44
SNX21-210ENST00000478230 LRRIQ1Q96JM4 1722 aa23.97■■□□□ 1.43
SNX21-210ENST00000478230 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
SNX21-210ENST00000478230 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
SNX21-210ENST00000478230 KDM4FA0A1W2PPD8 638 aa23.95■■□□□ 1.42
SNX21-210ENST00000478230 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
SNX21-210ENST00000478230 SCAPERQ9BY12 1400 aa23.93■■□□□ 1.42
SNX21-210ENST00000478230 ARHGAP5Q13017 1502 aa23.92■■□□□ 1.42
SNX21-210ENST00000478230 MAGI2Q86UL8 1455 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms