RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
CDHR3-211ENST00000478080 RRBP1Q9P2E9 1410 aaKnown RBP13.28□□□□□ -0.28
CDHR3-211ENST00000478080 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.29
CDHR3-211ENST00000478080 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
CDHR3-211ENST00000478080 CTTNBP2Q8WZ74 1663 aa13.26□□□□□ -0.29
CDHR3-211ENST00000478080 CCNB3Q8WWL7 1395 aa13.26□□□□□ -0.29
CDHR3-211ENST00000478080 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
CDHR3-211ENST00000478080 LRRC9Q6ZRR7 1453 aa13.24□□□□□ -0.29
CDHR3-211ENST00000478080 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDHR3-211ENST00000478080 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
CDHR3-211ENST00000478080 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
CDHR3-211ENST00000478080 MRC2Q9UBG0 1479 aa13.22□□□□□ -0.29
CDHR3-211ENST00000478080 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
CDHR3-211ENST00000478080 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
CDHR3-211ENST00000478080 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
CDHR3-211ENST00000478080 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
CDHR3-211ENST00000478080 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
CDHR3-211ENST00000478080 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
CDHR3-211ENST00000478080 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
CDHR3-211ENST00000478080 PBRM1Q86U86 1689 aa13.17□□□□□ -0.3
CDHR3-211ENST00000478080 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
CDHR3-211ENST00000478080 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-211ENST00000478080 SCAF1Q9H7N4 1312 aaKnown RBP13.15□□□□□ -0.3
CDHR3-211ENST00000478080 FMN1Q68DA7 1419 aa13.15□□□□□ -0.3
CDHR3-211ENST00000478080 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.31
CDHR3-211ENST00000478080 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
CDHR3-211ENST00000478080 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
CDHR3-211ENST00000478080 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
CDHR3-211ENST00000478080 WDR62O43379 1518 aa13.11□□□□□ -0.31
CDHR3-211ENST00000478080 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
CDHR3-211ENST00000478080 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
CDHR3-211ENST00000478080 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
CDHR3-211ENST00000478080 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
CDHR3-211ENST00000478080 MTUS2Q5JR59 1369 aa13.08□□□□□ -0.31
CDHR3-211ENST00000478080 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
CDHR3-211ENST00000478080 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
CDHR3-211ENST00000478080 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
CDHR3-211ENST00000478080 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
CDHR3-211ENST00000478080 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
CDHR3-211ENST00000478080 FGD6Q6ZV73 1430 aa13.02□□□□□ -0.32
CDHR3-211ENST00000478080 MAGI3Q5TCQ9 1506 aa13.02□□□□□ -0.33
CDHR3-211ENST00000478080 NCOA2Q15596 1464 aa13.02□□□□□ -0.33
CDHR3-211ENST00000478080 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
CDHR3-211ENST00000478080 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
CDHR3-211ENST00000478080 MAPKBP1O60336 1514 aa13.01□□□□□ -0.33
CDHR3-211ENST00000478080 FBLN2P98095 1184 aa13□□□□□ -0.33
CDHR3-211ENST00000478080 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
CDHR3-211ENST00000478080 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
CDHR3-211ENST00000478080 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
CDHR3-211ENST00000478080 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
CDHR3-211ENST00000478080 MIER1Q8N108 512 aa12.97□□□□□ -0.33
CDHR3-211ENST00000478080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDHR3-211ENST00000478080 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
CDHR3-211ENST00000478080 CHMP7Q8WUX9 453 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-211ENST00000478080 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
CDHR3-211ENST00000478080 KIAA0586Q9BVV6 1533 aa12.97□□□□□ -0.33
CDHR3-211ENST00000478080 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.33
CDHR3-211ENST00000478080 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.33
CDHR3-211ENST00000478080 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
CDHR3-211ENST00000478080 DISP1Q96F81 1524 aa12.96□□□□□ -0.34
CDHR3-211ENST00000478080 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
CDHR3-211ENST00000478080 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
CDHR3-211ENST00000478080 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
CDHR3-211ENST00000478080 ARHGEF11O15085 1522 aa12.92□□□□□ -0.34
CDHR3-211ENST00000478080 CEP170Q5SW79 1584 aa12.92□□□□□ -0.34
CDHR3-211ENST00000478080 CHIC2Q9UKJ5 165 aa12.92□□□□□ -0.34
CDHR3-211ENST00000478080 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
CDHR3-211ENST00000478080 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
CDHR3-211ENST00000478080 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
CDHR3-211ENST00000478080 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
CDHR3-211ENST00000478080 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
CDHR3-211ENST00000478080 ACIN1Q9UKV3 1341 aaKnown RBP12.89□□□□□ -0.35
CDHR3-211ENST00000478080 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
CDHR3-211ENST00000478080 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
CDHR3-211ENST00000478080 NAIPQ13075 1403 aa12.87□□□□□ -0.35
CDHR3-211ENST00000478080 JPH4Q96JJ6 628 aa12.86□□□□□ -0.35
CDHR3-211ENST00000478080 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
CDHR3-211ENST00000478080 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
CDHR3-211ENST00000478080 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
CDHR3-211ENST00000478080 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
CDHR3-211ENST00000478080 ZNF644Q9H582 1327 aaPredicted RBP12.83□□□□□ -0.35
CDHR3-211ENST00000478080 NUP160Q12769 1436 aa12.83□□□□□ -0.36
CDHR3-211ENST00000478080 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
CDHR3-211ENST00000478080 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
CDHR3-211ENST00000478080 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
CDHR3-211ENST00000478080 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
CDHR3-211ENST00000478080 KDM6BO15054 1643 aa12.8□□□□□ -0.36
CDHR3-211ENST00000478080 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
CDHR3-211ENST00000478080 HIRIP3Q9BW71 556 aaPredicted RBP12.79□□□□□ -0.36
CDHR3-211ENST00000478080 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
CDHR3-211ENST00000478080 CDK11AQ9UQ88 783 aaPredicted RBP12.79□□□□□ -0.36
CDHR3-211ENST00000478080 CARMIL2Q6F5E8 1435 aa12.79□□□□□ -0.36
CDHR3-211ENST00000478080 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
CDHR3-211ENST00000478080 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
CDHR3-211ENST00000478080 DAPK1P53355 1430 aa12.75□□□□□ -0.37
CDHR3-211ENST00000478080 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
CDHR3-211ENST00000478080 ZNF777Q9ULD5 760 aaPredicted RBP12.75□□□□□ -0.37
CDHR3-211ENST00000478080 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
CDHR3-211ENST00000478080 ABCC5O15440 1437 aa12.75□□□□□ -0.37
CDHR3-211ENST00000478080 FOXD1Q16676 465 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms