RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 CEP170Q5SW79 1584 aa21.44■■□□□ 1.02
LMNA-214ENST00000478063 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
LMNA-214ENST00000478063 IQGAP2Q13576 1575 aa21.41■■□□□ 1.02
LMNA-214ENST00000478063 NUP160Q12769 1436 aa21.38■■□□□ 1.01
LMNA-214ENST00000478063 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
LMNA-214ENST00000478063 CLIP1P30622 1438 aa21.35■■□□□ 1.01
LMNA-214ENST00000478063 KIAA0586Q9BVV6 1533 aa21.34■■□□□ 1.01
LMNA-214ENST00000478063 EFCAB5A4FU69 1503 aa21.28■■□□□ 1
LMNA-214ENST00000478063 SAMD9Q5K651 1589 aa21.27■■□□□ 1
LMNA-214ENST00000478063 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
LMNA-214ENST00000478063 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
LMNA-214ENST00000478063 UGGT2Q9NYU1 1516 aa21.25■□□□□ 0.99
LMNA-214ENST00000478063 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
LMNA-214ENST00000478063 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
LMNA-214ENST00000478063 KIAA0556O60303 1618 aa21.2■□□□□ 0.98
LMNA-214ENST00000478063 FHOD3Q2V2M9 1422 aa21.15■□□□□ 0.98
LMNA-214ENST00000478063 DISP1Q96F81 1524 aa21.14■□□□□ 0.98
LMNA-214ENST00000478063 P3H3Q8IVL6 736 aa21.14■□□□□ 0.97
LMNA-214ENST00000478063 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
LMNA-214ENST00000478063 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
LMNA-214ENST00000478063 VPS8Q8N3P4 1428 aa21.12■□□□□ 0.97
LMNA-214ENST00000478063 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
LMNA-214ENST00000478063 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
LMNA-214ENST00000478063 PCF11O94913 1555 aaKnown RBP21.05■□□□□ 0.96
LMNA-214ENST00000478063 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
LMNA-214ENST00000478063 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
LMNA-214ENST00000478063 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
LMNA-214ENST00000478063 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
LMNA-214ENST00000478063 LRRIQ1Q96JM4 1722 aa20.96■□□□□ 0.95
LMNA-214ENST00000478063 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
LMNA-214ENST00000478063 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
LMNA-214ENST00000478063 CASKIN1Q8WXD9 1431 aa20.94■□□□□ 0.94
LMNA-214ENST00000478063 CFAP43Q8NDM7 1665 aa20.93■□□□□ 0.94
LMNA-214ENST00000478063 PTPRGP23470 1445 aa20.9■□□□□ 0.94
LMNA-214ENST00000478063 ATP1B4Q9UN42 357 aaPredicted RBP20.89■□□□□ 0.93
LMNA-214ENST00000478063 ABCA8O94911 1581 aa20.88■□□□□ 0.93
LMNA-214ENST00000478063 PLB1Q6P1J6 1458 aa20.87■□□□□ 0.93
LMNA-214ENST00000478063 TIAM1Q13009 1591 aa20.86■□□□□ 0.93
LMNA-214ENST00000478063 APLP2Q06481 763 aa20.86■□□□□ 0.93
LMNA-214ENST00000478063 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
LMNA-214ENST00000478063 RIMBP3CA6NJZ7 1639 aa20.85■□□□□ 0.93
LMNA-214ENST00000478063 RIMBP3BA6NNM3 1639 aa20.85■□□□□ 0.93
LMNA-214ENST00000478063 RIMBP3Q9UFD9 1639 aa20.85■□□□□ 0.93
LMNA-214ENST00000478063 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
LMNA-214ENST00000478063 NUP153P49790 1475 aaKnown RBP20.81■□□□□ 0.92
LMNA-214ENST00000478063 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
LMNA-214ENST00000478063 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
LMNA-214ENST00000478063 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
LMNA-214ENST00000478063 UACAQ9BZF9 1416 aa20.78■□□□□ 0.92
LMNA-214ENST00000478063 ABCC2Q92887 1545 aa20.78■□□□□ 0.92
LMNA-214ENST00000478063 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
LMNA-214ENST00000478063 ADCY10Q96PN6 1610 aa20.75■□□□□ 0.91
LMNA-214ENST00000478063 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
LMNA-214ENST00000478063 UHRF1BP1LA0JNW5 1464 aa20.73■□□□□ 0.91
LMNA-214ENST00000478063 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
LMNA-214ENST00000478063 LRRC9Q6ZRR7 1453 aa20.71■□□□□ 0.91
LMNA-214ENST00000478063 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
LMNA-214ENST00000478063 KANK4Q5T7N3 995 aaPredicted RBP20.69■□□□□ 0.9
LMNA-214ENST00000478063 ATP10BO94823 1461 aa20.68■□□□□ 0.9
LMNA-214ENST00000478063 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
LMNA-214ENST00000478063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
LMNA-214ENST00000478063 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
LMNA-214ENST00000478063 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
LMNA-214ENST00000478063 MTUS2Q5JR59 1369 aa20.65■□□□□ 0.9
LMNA-214ENST00000478063 KDM5BQ9UGL1 1544 aa20.63■□□□□ 0.89
LMNA-214ENST00000478063 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
LMNA-214ENST00000478063 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
LMNA-214ENST00000478063 TROQ12816 1431 aaPredicted RBP20.57■□□□□ 0.88
LMNA-214ENST00000478063 KIF14Q15058 1648 aa20.56■□□□□ 0.88
LMNA-214ENST00000478063 PLEKHD1A6NEE1 506 aa20.54■□□□□ 0.88
LMNA-214ENST00000478063 NCOA2Q15596 1464 aa20.53■□□□□ 0.88
LMNA-214ENST00000478063 NPM1P06748 294 aaKnown RBP eCLIP20.51■□□□□ 0.87
LMNA-214ENST00000478063 ITSN2Q9NZM3 1697 aa20.5■□□□□ 0.87
LMNA-214ENST00000478063 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
LMNA-214ENST00000478063 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
LMNA-214ENST00000478063 PHLDB1Q86UU1 1377 aa20.46■□□□□ 0.87
LMNA-214ENST00000478063 ASXL2Q76L83 1435 aa20.45■□□□□ 0.86
LMNA-214ENST00000478063 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
LMNA-214ENST00000478063 MYO5CQ9NQX4 1742 aa20.44■□□□□ 0.86
LMNA-214ENST00000478063 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
LMNA-214ENST00000478063 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
LMNA-214ENST00000478063 MYOM3Q5VTT5 1437 aa20.43■□□□□ 0.86
LMNA-214ENST00000478063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.863e-14■■□□□ 12.5
LMNA-214ENST00000478063 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
LMNA-214ENST00000478063 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
LMNA-214ENST00000478063 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
LMNA-214ENST00000478063 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
LMNA-214ENST00000478063 CDC42BPBQ9Y5S2 1711 aa20.4■□□□□ 0.86
LMNA-214ENST00000478063 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
LMNA-214ENST00000478063 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
LMNA-214ENST00000478063 PTPN23Q9H3S7 1636 aa20.38■□□□□ 0.85
LMNA-214ENST00000478063 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
LMNA-214ENST00000478063 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
LMNA-214ENST00000478063 GPATCH8Q9UKJ3 1502 aaKnown RBP20.35■□□□□ 0.85
LMNA-214ENST00000478063 PCGF6Q9BYE7 350 aa20.33■□□□□ 0.85
LMNA-214ENST00000478063 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
LMNA-214ENST00000478063 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
LMNA-214ENST00000478063 ARHGAP5Q13017 1502 aa20.29■□□□□ 0.84
LMNA-214ENST00000478063 KIF13AQ9H1H9 1805 aa20.29■□□□□ 0.84
LMNA-214ENST00000478063 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms