RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.83
TRA2B-211ENST00000477939 RUSC2Q8N2Y8 1516 aa9.85□□□□□ -0.83
TRA2B-211ENST00000477939 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
TRA2B-211ENST00000477939 PRG4Q92954 1404 aaPredicted RBP9.8□□□□□ -0.84
TRA2B-211ENST00000477939 CUL7Q14999 1698 aa9.78□□□□□ -0.84
TRA2B-211ENST00000477939 APLP2Q06481 763 aa9.78□□□□□ -0.84
TRA2B-211ENST00000477939 KIF13AQ9H1H9 1805 aa9.77□□□□□ -0.84
TRA2B-211ENST00000477939 IGF1RP08069 1367 aa9.75□□□□□ -0.85
TRA2B-211ENST00000477939 KIF27Q86VH2 1401 aa9.75□□□□□ -0.85
TRA2B-211ENST00000477939 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
TRA2B-211ENST00000477939 ADCY10Q96PN6 1610 aa9.74□□□□□ -0.85
TRA2B-211ENST00000477939 KIAA0586Q9BVV6 1533 aa9.74□□□□□ -0.85
TRA2B-211ENST00000477939 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
TRA2B-211ENST00000477939 DIP2BQ9P265 1576 aa9.7□□□□□ -0.86
TRA2B-211ENST00000477939 ABCC10Q5T3U5 1492 aa9.69□□□□□ -0.86
TRA2B-211ENST00000477939 IQGAP2Q13576 1575 aa9.67□□□□□ -0.86
TRA2B-211ENST00000477939 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
TRA2B-211ENST00000477939 PRKCSHP14314 528 aaPredicted RBP9.64□□□□□ -0.87
TRA2B-211ENST00000477939 FAM69CQ0P6D2 419 aa9.63□□□□□ -0.87
TRA2B-211ENST00000477939 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
TRA2B-211ENST00000477939 PTPRGP23470 1445 aa9.62□□□□□ -0.87
TRA2B-211ENST00000477939 TNIKQ9UKE5 1360 aa9.62□□□□□ -0.87
TRA2B-211ENST00000477939 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
TRA2B-211ENST00000477939 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRA2B-211ENST00000477939 CARMIL2Q6F5E8 1435 aa9.61□□□□□ -0.87
TRA2B-211ENST00000477939 TSPOAP1O95153 1857 aa9.61□□□□□ -0.87
TRA2B-211ENST00000477939 UGGT2Q9NYU1 1516 aa9.61□□□□□ -0.87
TRA2B-211ENST00000477939 RAPGEF2Q9Y4G8 1499 aa9.6□□□□□ -0.87
TRA2B-211ENST00000477939 KDM6BO15054 1643 aa9.6□□□□□ -0.87
TRA2B-211ENST00000477939 KIAA0556O60303 1618 aa9.6□□□□□ -0.87
TRA2B-211ENST00000477939 AEBP2Q6ZN18 517 aaPredicted RBP9.59□□□□□ -0.87
TRA2B-211ENST00000477939 UHRF1BP1LA0JNW5 1464 aa9.59□□□□□ -0.87
TRA2B-211ENST00000477939 PPRC1Q5VV67 1664 aaKnown RBP9.58□□□□□ -0.88
TRA2B-211ENST00000477939 CTTNBP2Q8WZ74 1663 aa9.58□□□□□ -0.88
TRA2B-211ENST00000477939 ASXL2Q76L83 1435 aa9.57□□□□□ -0.88
TRA2B-211ENST00000477939 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
TRA2B-211ENST00000477939 GLI2P10070 1586 aa9.56□□□□□ -0.88
TRA2B-211ENST00000477939 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
TRA2B-211ENST00000477939 KDM5BQ9UGL1 1544 aa9.56□□□□□ -0.88
TRA2B-211ENST00000477939 PLB1Q6P1J6 1458 aa9.55□□□□□ -0.88
TRA2B-211ENST00000477939 MAP3K4Q9Y6R4 1608 aa9.53□□□□□ -0.88
TRA2B-211ENST00000477939 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
TRA2B-211ENST00000477939 EPRSP07814 1512 aaKnown RBP9.52□□□□□ -0.88
TRA2B-211ENST00000477939 ABCA8O94911 1581 aa9.5□□□□□ -0.89
TRA2B-211ENST00000477939 GOLGA3Q08378 1498 aa9.49□□□□□ -0.89
TRA2B-211ENST00000477939 WDR7Q9Y4E6 1490 aa9.49□□□□□ -0.89
TRA2B-211ENST00000477939 COL17A1Q9UMD9 1497 aaPredicted RBP9.48□□□□□ -0.89
TRA2B-211ENST00000477939 KDM4FA0A1W2PPD8 638 aa9.46□□□□□ -0.9
TRA2B-211ENST00000477939 TEX14Q8IWB6 1497 aa9.46□□□□□ -0.9
TRA2B-211ENST00000477939 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
TRA2B-211ENST00000477939 SAMD9Q5K651 1589 aa9.44□□□□□ -0.9
TRA2B-211ENST00000477939 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
TRA2B-211ENST00000477939 ADGRL1O94910 1474 aa9.42□□□□□ -0.9
TRA2B-211ENST00000477939 CD109Q6YHK3 1445 aa9.39□□□□□ -0.91
TRA2B-211ENST00000477939 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
TRA2B-211ENST00000477939 ATP10BO94823 1461 aa9.39□□□□□ -0.91
TRA2B-211ENST00000477939 ABCA9Q8IUA7 1624 aa9.38□□□□□ -0.91
TRA2B-211ENST00000477939 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
TRA2B-211ENST00000477939 EEA1Q15075 1411 aa9.38□□□□□ -0.91
TRA2B-211ENST00000477939 ARID3CA6NKF2 412 aa9.37□□□□□ -0.91
TRA2B-211ENST00000477939 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
TRA2B-211ENST00000477939 NUP153P49790 1475 aaKnown RBP9.36□□□□□ -0.91
TRA2B-211ENST00000477939 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
TRA2B-211ENST00000477939 KIF21BO75037 1637 aa9.35□□□□□ -0.91
TRA2B-211ENST00000477939 FHOD3Q2V2M9 1422 aa9.35□□□□□ -0.91
TRA2B-211ENST00000477939 ARAP3Q8WWN8 1544 aa9.35□□□□□ -0.91
TRA2B-211ENST00000477939 FRMPD1Q5SYB0 1578 aa9.33□□□□□ -0.92
TRA2B-211ENST00000477939 EFCAB5A4FU69 1503 aa9.32□□□□□ -0.92
TRA2B-211ENST00000477939 HECW2Q9P2P5 1572 aa9.32□□□□□ -0.92
TRA2B-211ENST00000477939 NEO1Q92859 1461 aa9.3□□□□□ -0.92
TRA2B-211ENST00000477939 RANGAP1P46060 587 aaPredicted RBP9.29□□□□□ -0.92
TRA2B-211ENST00000477939 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
TRA2B-211ENST00000477939 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
TRA2B-211ENST00000477939 RICTORQ6R327 1708 aa9.28□□□□□ -0.92
TRA2B-211ENST00000477939 PHLDB1Q86UU1 1377 aa9.27□□□□□ -0.93
TRA2B-211ENST00000477939 CDK13Q14004 1512 aaKnown RBP9.27□□□□□ -0.93
TRA2B-211ENST00000477939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRA2B-211ENST00000477939 NCBP3Q53F19 620 aaKnown RBP9.27□□□□□ -0.93
TRA2B-211ENST00000477939 ADAMTSL3P82987 1691 aa9.26□□□□□ -0.93
TRA2B-211ENST00000477939 ARHGEF40Q8TER5 1519 aa9.26□□□□□ -0.93
TRA2B-211ENST00000477939 CFAP74Q9C0B2 1584 aa9.26□□□□□ -0.93
TRA2B-211ENST00000477939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
TRA2B-211ENST00000477939 HNRNPUL2Q1KMD3 747 aaKnown RBP9.26□□□□□ -0.93
TRA2B-211ENST00000477939 RAPGEF3O95398 923 aa9.25□□□□□ -0.93
TRA2B-211ENST00000477939 FANCAO15360 1455 aa9.25□□□□□ -0.93
TRA2B-211ENST00000477939 BCORL1Q5H9F3 1711 aa9.25□□□□□ -0.93
TRA2B-211ENST00000477939 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
TRA2B-211ENST00000477939 HECW1Q76N89 1606 aa9.23□□□□□ -0.93
TRA2B-211ENST00000477939 ZMYM4Q5VZL5 1548 aa9.23□□□□□ -0.93
TRA2B-211ENST00000477939 MADDQ8WXG6 1647 aa9.23□□□□□ -0.93
TRA2B-211ENST00000477939 SIGLEC1Q9BZZ2 1709 aa9.22□□□□□ -0.93
TRA2B-211ENST00000477939 DENND4BO75064 1496 aaPredicted RBP9.22□□□□□ -0.93
TRA2B-211ENST00000477939 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
TRA2B-211ENST00000477939 EIF5BO60841 1220 aaKnown RBP9.22□□□□□ -0.93
TRA2B-211ENST00000477939 LRRIQ1Q96JM4 1722 aa9.22□□□□□ -0.93
TRA2B-211ENST00000477939 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
TRA2B-211ENST00000477939 PTPRMP28827 1452 aa9.21□□□□□ -0.93
TRA2B-211ENST00000477939 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.94
TRA2B-211ENST00000477939 FMN1Q68DA7 1419 aa9.21□□□□□ -0.94
TRA2B-211ENST00000477939 KIF14Q15058 1648 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms