RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 CLIP1P30622 1438 aa22.88■■□□□ 1.25
NELFCD-205ENST00000477741 CEP170Q5SW79 1584 aa22.81■■□□□ 1.24
NELFCD-205ENST00000477741 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
NELFCD-205ENST00000477741 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
NELFCD-205ENST00000477741 ARHGAP35Q9NRY4 1499 aa22.78■■□□□ 1.24
NELFCD-205ENST00000477741 CHD1O14646 1710 aa22.77■■□□□ 1.24
NELFCD-205ENST00000477741 NUP160Q12769 1436 aa22.76■■□□□ 1.23
NELFCD-205ENST00000477741 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
NELFCD-205ENST00000477741 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
NELFCD-205ENST00000477741 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
NELFCD-205ENST00000477741 FHOD3Q2V2M9 1422 aa22.67■■□□□ 1.22
NELFCD-205ENST00000477741 JPH4Q96JJ6 628 aa22.64■■□□□ 1.21
NELFCD-205ENST00000477741 VPS8Q8N3P4 1428 aa22.61■■□□□ 1.21
NELFCD-205ENST00000477741 UGGT2Q9NYU1 1516 aa22.6■■□□□ 1.21
NELFCD-205ENST00000477741 SAMD9Q5K651 1589 aa22.6■■□□□ 1.21
NELFCD-205ENST00000477741 PPARGC1BQ86YN6 1023 aaKnown RBP22.59■■□□□ 1.21
NELFCD-205ENST00000477741 EFCAB5A4FU69 1503 aa22.59■■□□□ 1.21
NELFCD-205ENST00000477741 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
NELFCD-205ENST00000477741 DISP1Q96F81 1524 aa22.58■■□□□ 1.2
NELFCD-205ENST00000477741 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
NELFCD-205ENST00000477741 KIAA0556O60303 1618 aa22.51■■□□□ 1.19
NELFCD-205ENST00000477741 PRG4Q92954 1404 aaPredicted RBP22.5■■□□□ 1.19
NELFCD-205ENST00000477741 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
NELFCD-205ENST00000477741 ATP1B4Q9UN42 357 aaPredicted RBP22.46■■□□□ 1.19
NELFCD-205ENST00000477741 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
NELFCD-205ENST00000477741 SHROOM2Q13796 1616 aa22.44■■□□□ 1.18
NELFCD-205ENST00000477741 CARMIL2Q6F5E8 1435 aa22.43■■□□□ 1.18
NELFCD-205ENST00000477741 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
NELFCD-205ENST00000477741 FMN1Q68DA7 1419 aa22.43■■□□□ 1.18
NELFCD-205ENST00000477741 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
NELFCD-205ENST00000477741 CASKIN1Q8WXD9 1431 aa22.37■■□□□ 1.17
NELFCD-205ENST00000477741 APLP2Q06481 763 aa22.35■■□□□ 1.17
NELFCD-205ENST00000477741 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
NELFCD-205ENST00000477741 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
NELFCD-205ENST00000477741 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
NELFCD-205ENST00000477741 PTPRGP23470 1445 aa22.31■■□□□ 1.16
NELFCD-205ENST00000477741 LRRIQ1Q96JM4 1722 aa22.25■■□□□ 1.15
NELFCD-205ENST00000477741 NUP153P49790 1475 aaKnown RBP22.24■■□□□ 1.15
NELFCD-205ENST00000477741 TIAM1Q13009 1591 aa22.24■■□□□ 1.15
NELFCD-205ENST00000477741 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
NELFCD-205ENST00000477741 CDK13Q14004 1512 aaKnown RBP22.23■■□□□ 1.15
NELFCD-205ENST00000477741 EPRSP07814 1512 aaKnown RBP22.21■■□□□ 1.15
NELFCD-205ENST00000477741 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
NELFCD-205ENST00000477741 ABCA8O94911 1581 aa22.2■■□□□ 1.14
NELFCD-205ENST00000477741 LRRC9Q6ZRR7 1453 aa22.17■■□□□ 1.14
NELFCD-205ENST00000477741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
NELFCD-205ENST00000477741 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
NELFCD-205ENST00000477741 MAP3K1Q13233 1512 aa22.17■■□□□ 1.14
NELFCD-205ENST00000477741 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
NELFCD-205ENST00000477741 CFAP43Q8NDM7 1665 aa22.16■■□□□ 1.14
NELFCD-205ENST00000477741 MAGI3Q5TCQ9 1506 aa22.14■■□□□ 1.14
NELFCD-205ENST00000477741 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
NELFCD-205ENST00000477741 ARHGEF11O15085 1522 aa22.13■■□□□ 1.13
NELFCD-205ENST00000477741 CCDC18Q5T9S5 1454 aa22.12■■□□□ 1.13
NELFCD-205ENST00000477741 TRIM26Q12899 539 aaPredicted RBP22.11■■□□□ 1.13
NELFCD-205ENST00000477741 ATP10BO94823 1461 aa22.11■■□□□ 1.13
NELFCD-205ENST00000477741 MTUS2Q5JR59 1369 aa22.1■■□□□ 1.13
NELFCD-205ENST00000477741 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
NELFCD-205ENST00000477741 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
NELFCD-205ENST00000477741 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
NELFCD-205ENST00000477741 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
NELFCD-205ENST00000477741 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
NELFCD-205ENST00000477741 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
NELFCD-205ENST00000477741 ADCY10Q96PN6 1610 aa22.01■■□□□ 1.11
NELFCD-205ENST00000477741 UHRF1BP1LA0JNW5 1464 aa22.01■■□□□ 1.11
NELFCD-205ENST00000477741 EHBP1L1Q8N3D4 1523 aa21.99■■□□□ 1.11
NELFCD-205ENST00000477741 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
NELFCD-205ENST00000477741 NCOA2Q15596 1464 aa21.97■■□□□ 1.11
NELFCD-205ENST00000477741 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
NELFCD-205ENST00000477741 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
NELFCD-205ENST00000477741 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
NELFCD-205ENST00000477741 ZCCHC11Q5TAX3 1644 aaKnown RBP21.93■■□□□ 1.1
NELFCD-205ENST00000477741 KIF14Q15058 1648 aa21.9■■□□□ 1.1
NELFCD-205ENST00000477741 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
NELFCD-205ENST00000477741 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
NELFCD-205ENST00000477741 RRBP1Q9P2E9 1410 aaKnown RBP21.88■■□□□ 1.09
NELFCD-205ENST00000477741 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
NELFCD-205ENST00000477741 MYOM3Q5VTT5 1437 aa21.84■■□□□ 1.09
NELFCD-205ENST00000477741 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.08
NELFCD-205ENST00000477741 FGD6Q6ZV73 1430 aa21.82■■□□□ 1.08
NELFCD-205ENST00000477741 NPM1P06748 294 aaKnown RBP eCLIP21.82■■□□□ 1.08
NELFCD-205ENST00000477741 ITGAEP38570 1179 aa21.81■■□□□ 1.08
NELFCD-205ENST00000477741 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
NELFCD-205ENST00000477741 ABCC10Q5T3U5 1492 aa21.8■■□□□ 1.08
NELFCD-205ENST00000477741 GPATCH8Q9UKJ3 1502 aaKnown RBP21.77■■□□□ 1.08
NELFCD-205ENST00000477741 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
NELFCD-205ENST00000477741 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.08
NELFCD-205ENST00000477741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
NELFCD-205ENST00000477741 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
NELFCD-205ENST00000477741 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
NELFCD-205ENST00000477741 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
NELFCD-205ENST00000477741 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
NELFCD-205ENST00000477741 MIA2Q96PC5 1412 aa21.69■■□□□ 1.06
NELFCD-205ENST00000477741 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
NELFCD-205ENST00000477741 CDC42BPAQ5VT25 1732 aa21.67■■□□□ 1.06
NELFCD-205ENST00000477741 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
NELFCD-205ENST00000477741 PTPRKQ15262 1439 aa21.65■■□□□ 1.06
NELFCD-205ENST00000477741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.63■■□□□ 1.05
NELFCD-205ENST00000477741 MAPKBP1O60336 1514 aa21.62■■□□□ 1.05
NELFCD-205ENST00000477741 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms