RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 JPH4Q96JJ6 628 aa30.08■■■□□ 2.41
PTPN7-209ENST00000477554 PRG4Q92954 1404 aaPredicted RBP30.08■■■□□ 2.41
PTPN7-209ENST00000477554 KIAA0586Q9BVV6 1533 aa30.03■■■□□ 2.4
PTPN7-209ENST00000477554 RAPGEF2Q9Y4G8 1499 aa29.96■■■□□ 2.39
PTPN7-209ENST00000477554 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
PTPN7-209ENST00000477554 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
PTPN7-209ENST00000477554 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
PTPN7-209ENST00000477554 TRHP20396 242 aaPredicted RBP29.79■■■□□ 2.36
PTPN7-209ENST00000477554 FAM9AQ8IZU1 332 aaPredicted RBP29.77■■■□□ 2.36
PTPN7-209ENST00000477554 DISP1Q96F81 1524 aa29.75■■■□□ 2.35
PTPN7-209ENST00000477554 TTBK1Q5TCY1 1321 aaPredicted RBP29.75■■■□□ 2.35
PTPN7-209ENST00000477554 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
PTPN7-209ENST00000477554 CSRNP3Q8WYN3 585 aa29.73■■■□□ 2.35
PTPN7-209ENST00000477554 ADCY10Q96PN6 1610 aa29.72■■■□□ 2.35
PTPN7-209ENST00000477554 UGGT2Q9NYU1 1516 aa29.69■■■□□ 2.34
PTPN7-209ENST00000477554 PTPRGP23470 1445 aa29.64■■■□□ 2.33
PTPN7-209ENST00000477554 CARMIL2Q6F5E8 1435 aa29.63■■■□□ 2.33
PTPN7-209ENST00000477554 KIAA0556O60303 1618 aa29.63■■■□□ 2.33
PTPN7-209ENST00000477554 TNIKQ9UKE5 1360 aa29.62■■■□□ 2.33
PTPN7-209ENST00000477554 EEA1Q15075 1411 aa29.6■■■□□ 2.33
PTPN7-209ENST00000477554 EHMT2Q96KQ7 1210 aa29.51■■■□□ 2.31
PTPN7-209ENST00000477554 KIF13AQ9H1H9 1805 aa29.5■■■□□ 2.31
PTPN7-209ENST00000477554 KIF21BO75037 1637 aa29.45■■■□□ 2.3
PTPN7-209ENST00000477554 UACAQ9BZF9 1416 aa29.44■■■□□ 2.3
PTPN7-209ENST00000477554 P3H3Q8IVL6 736 aa29.44■■■□□ 2.3
PTPN7-209ENST00000477554 MAPKBP1O60336 1514 aa29.44■■■□□ 2.3
PTPN7-209ENST00000477554 ABCC2Q92887 1545 aa29.41■■■□□ 2.3
PTPN7-209ENST00000477554 NPM1P06748 294 aaKnown RBP eCLIP29.41■■■□□ 2.3
PTPN7-209ENST00000477554 RANGAP1P46060 587 aaPredicted RBP29.41■■■□□ 2.3
PTPN7-209ENST00000477554 PLB1Q6P1J6 1458 aa29.41■■■□□ 2.3
PTPN7-209ENST00000477554 UHRF1BP1LA0JNW5 1464 aa29.4■■■□□ 2.3
PTPN7-209ENST00000477554 GOLGA3Q08378 1498 aa29.39■■■□□ 2.3
PTPN7-209ENST00000477554 DIP2BQ9P265 1576 aa29.36■■■□□ 2.29
PTPN7-209ENST00000477554 ABCC10Q5T3U5 1492 aa29.36■■■□□ 2.29
PTPN7-209ENST00000477554 SAMD9Q5K651 1589 aa29.36■■■□□ 2.29
PTPN7-209ENST00000477554 FAM69CQ0P6D2 419 aa29.32■■■□□ 2.28
PTPN7-209ENST00000477554 ZCCHC11Q5TAX3 1644 aaKnown RBP29.32■■■□□ 2.28
PTPN7-209ENST00000477554 ABCA8O94911 1581 aa29.31■■■□□ 2.28
PTPN7-209ENST00000477554 KDM5BQ9UGL1 1544 aa29.3■■■□□ 2.28
PTPN7-209ENST00000477554 ASXL2Q76L83 1435 aa29.29■■■□□ 2.28
PTPN7-209ENST00000477554 FHOD3Q2V2M9 1422 aa29.24■■■□□ 2.27
PTPN7-209ENST00000477554 ARID3CA6NKF2 412 aa29.21■■■□□ 2.27
PTPN7-209ENST00000477554 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.27
PTPN7-209ENST00000477554 TSPOAP1O95153 1857 aa29.2■■■□□ 2.26
PTPN7-209ENST00000477554 EPRSP07814 1512 aaKnown RBP29.11■■■□□ 2.25
PTPN7-209ENST00000477554 RAPGEF6Q8TEU7 1601 aa29.1■■■□□ 2.25
PTPN7-209ENST00000477554 PPRC1Q5VV67 1664 aaKnown RBP29.1■■■□□ 2.25
PTPN7-209ENST00000477554 ATP10BO94823 1461 aa29.08■■■□□ 2.25
PTPN7-209ENST00000477554 EFCAB5A4FU69 1503 aa29.08■■■□□ 2.25
PTPN7-209ENST00000477554 GLI2P10070 1586 aa29.07■■■□□ 2.24
PTPN7-209ENST00000477554 WDR7Q9Y4E6 1490 aa29.07■■■□□ 2.24
PTPN7-209ENST00000477554 ARHGAP35Q9NRY4 1499 aa29.05■■■□□ 2.24
PTPN7-209ENST00000477554 NUP153P49790 1475 aaKnown RBP29.04■■■□□ 2.24
PTPN7-209ENST00000477554 MAP3K4Q9Y6R4 1608 aa29.01■■■□□ 2.23
PTPN7-209ENST00000477554 KCNH8Q96L42 1107 aa29■■■□□ 2.23
PTPN7-209ENST00000477554 KDM6BO15054 1643 aa28.9■■■□□ 2.22
PTPN7-209ENST00000477554 CDK13Q14004 1512 aaKnown RBP28.88■■■□□ 2.21
PTPN7-209ENST00000477554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.87■■■□□ 2.21
PTPN7-209ENST00000477554 HNRNPUL2Q1KMD3 747 aaKnown RBP28.87■■■□□ 2.21
PTPN7-209ENST00000477554 COL17A1Q9UMD9 1497 aaPredicted RBP28.86■■■□□ 2.21
PTPN7-209ENST00000477554 CFAP43Q8NDM7 1665 aa28.83■■■□□ 2.21
PTPN7-209ENST00000477554 CD109Q6YHK3 1445 aa28.82■■■□□ 2.2
PTPN7-209ENST00000477554 LRRIQ1Q96JM4 1722 aa28.8■■■□□ 2.2
PTPN7-209ENST00000477554 FMN1Q68DA7 1419 aa28.78■■■□□ 2.2
PTPN7-209ENST00000477554 ATP1B4Q9UN42 357 aaPredicted RBP28.77■■■□□ 2.2
PTPN7-209ENST00000477554 ABCA9Q8IUA7 1624 aa28.76■■■□□ 2.19
PTPN7-209ENST00000477554 MAGI3Q5TCQ9 1506 aa28.75■■■□□ 2.19
PTPN7-209ENST00000477554 HECW1Q76N89 1606 aa28.74■■■□□ 2.19
PTPN7-209ENST00000477554 CLIP1P30622 1438 aa28.74■■■□□ 2.19
PTPN7-209ENST00000477554 TEX14Q8IWB6 1497 aa28.73■■■□□ 2.19
PTPN7-209ENST00000477554 LOC105371045A0A1W2PR82 267 aa28.73■■■□□ 2.19
PTPN7-209ENST00000477554 PCF11O94913 1555 aaKnown RBP28.73■■■□□ 2.19
PTPN7-209ENST00000477554 PLEKHD1A6NEE1 506 aa28.68■■■□□ 2.18
PTPN7-209ENST00000477554 TTC37Q6PGP7 1564 aa28.66■■■□□ 2.18
PTPN7-209ENST00000477554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.66■■■□□ 2.18
PTPN7-209ENST00000477554 CASKIN1Q8WXD9 1431 aa28.61■■■□□ 2.17
PTPN7-209ENST00000477554 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
PTPN7-209ENST00000477554 KIF14Q15058 1648 aa28.59■■■□□ 2.17
PTPN7-209ENST00000477554 FYCO1Q9BQS8 1478 aa28.52■■■□□ 2.16
PTPN7-209ENST00000477554 ARAP3Q8WWN8 1544 aa28.51■■■□□ 2.15
PTPN7-209ENST00000477554 TROQ12816 1431 aaPredicted RBP28.49■■■□□ 2.15
PTPN7-209ENST00000477554 RAPGEF3O95398 923 aa28.48■■■□□ 2.15
PTPN7-209ENST00000477554 FRMPD1Q5SYB0 1578 aa28.47■■■□□ 2.15
PTPN7-209ENST00000477554 NEO1Q92859 1461 aa28.47■■■□□ 2.15
PTPN7-209ENST00000477554 CCDC18Q5T9S5 1454 aa28.45■■■□□ 2.14
PTPN7-209ENST00000477554 KDM4FA0A1W2PPD8 638 aa28.44■■■□□ 2.14
PTPN7-209ENST00000477554 FANCAO15360 1455 aa28.44■■■□□ 2.14
PTPN7-209ENST00000477554 CDK11AQ9UQ88 783 aaPredicted RBP28.42■■■□□ 2.14
PTPN7-209ENST00000477554 AKNAQ7Z591 1439 aa28.41■■■□□ 2.14
PTPN7-209ENST00000477554 PLCH2O75038 1416 aa28.4■■■□□ 2.14
PTPN7-209ENST00000477554 MYO5CQ9NQX4 1742 aa28.4■■■□□ 2.14
PTPN7-209ENST00000477554 PHLDB1Q86UU1 1377 aa28.36■■■□□ 2.13
PTPN7-209ENST00000477554 RICTORQ6R327 1708 aa28.36■■■□□ 2.13
PTPN7-209ENST00000477554 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
PTPN7-209ENST00000477554 CDC42BPBQ9Y5S2 1711 aa28.34■■■□□ 2.13
PTPN7-209ENST00000477554 CFAP74Q9C0B2 1584 aa28.33■■■□□ 2.13
PTPN7-209ENST00000477554 ADGRL1O94910 1474 aa28.31■■■□□ 2.12
PTPN7-209ENST00000477554 DENND4BO75064 1496 aaPredicted RBP28.3■■■□□ 2.12
PTPN7-209ENST00000477554 ARHGAP5Q13017 1502 aa28.28■■■□□ 2.12
PTPN7-209ENST00000477554 CDC42BPAQ5VT25 1732 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms