RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 JPH4Q96JJ6 628 aa26.71■■□□□ 1.87
COMMD6-209ENST00000477377 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
COMMD6-209ENST00000477377 KIAA0586Q9BVV6 1533 aa26.64■■□□□ 1.85
COMMD6-209ENST00000477377 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
COMMD6-209ENST00000477377 TRHP20396 242 aaPredicted RBP26.44■■□□□ 1.82
COMMD6-209ENST00000477377 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
COMMD6-209ENST00000477377 IQGAP2Q13576 1575 aa26.39■■□□□ 1.82
COMMD6-209ENST00000477377 DISP1Q96F81 1524 aa26.33■■□□□ 1.81
COMMD6-209ENST00000477377 UGGT2Q9NYU1 1516 aa26.3■■□□□ 1.8
COMMD6-209ENST00000477377 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
COMMD6-209ENST00000477377 ADCY10Q96PN6 1610 aa26.29■■□□□ 1.8
COMMD6-209ENST00000477377 TNIKQ9UKE5 1360 aa26.29■■□□□ 1.8
COMMD6-209ENST00000477377 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
COMMD6-209ENST00000477377 PTPRGP23470 1445 aa26.28■■□□□ 1.8
COMMD6-209ENST00000477377 CARMIL2Q6F5E8 1435 aa26.28■■□□□ 1.8
COMMD6-209ENST00000477377 CTTNBP2Q8WZ74 1663 aa26.21■■□□□ 1.79
COMMD6-209ENST00000477377 EEA1Q15075 1411 aa26.21■■□□□ 1.79
COMMD6-209ENST00000477377 KIAA0556O60303 1618 aa26.18■■□□□ 1.78
COMMD6-209ENST00000477377 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
COMMD6-209ENST00000477377 MAPKBP1O60336 1514 aa26.15■■□□□ 1.78
COMMD6-209ENST00000477377 NPM1P06748 294 aaKnown RBP eCLIP26.13■■□□□ 1.77
COMMD6-209ENST00000477377 FAM9AQ8IZU1 332 aaPredicted RBP26.12■■□□□ 1.77
COMMD6-209ENST00000477377 UACAQ9BZF9 1416 aa26.12■■□□□ 1.77
COMMD6-209ENST00000477377 UHRF1BP1LA0JNW5 1464 aa26.11■■□□□ 1.77
COMMD6-209ENST00000477377 KIF13AQ9H1H9 1805 aa26.11■■□□□ 1.77
COMMD6-209ENST00000477377 ABCC10Q5T3U5 1492 aa26.1■■□□□ 1.77
COMMD6-209ENST00000477377 ABCC2Q92887 1545 aa26.09■■□□□ 1.77
COMMD6-209ENST00000477377 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
COMMD6-209ENST00000477377 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
COMMD6-209ENST00000477377 DIP2BQ9P265 1576 aa26.02■■□□□ 1.76
COMMD6-209ENST00000477377 KDM5BQ9UGL1 1544 aa26■■□□□ 1.75
COMMD6-209ENST00000477377 PLB1Q6P1J6 1458 aa25.99■■□□□ 1.75
COMMD6-209ENST00000477377 KIF21BO75037 1637 aa25.99■■□□□ 1.75
COMMD6-209ENST00000477377 ASXL2Q76L83 1435 aa25.96■■□□□ 1.75
COMMD6-209ENST00000477377 ABCA8O94911 1581 aa25.95■■□□□ 1.75
COMMD6-209ENST00000477377 SAMD9Q5K651 1589 aa25.95■■□□□ 1.74
COMMD6-209ENST00000477377 P3H3Q8IVL6 736 aa25.94■■□□□ 1.74
COMMD6-209ENST00000477377 ZCCHC11Q5TAX3 1644 aaKnown RBP25.9■■□□□ 1.74
COMMD6-209ENST00000477377 GLI2P10070 1586 aa25.84■■□□□ 1.73
COMMD6-209ENST00000477377 EPRSP07814 1512 aaKnown RBP25.82■■□□□ 1.72
COMMD6-209ENST00000477377 RANGAP1P46060 587 aaPredicted RBP25.81■■□□□ 1.72
COMMD6-209ENST00000477377 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
COMMD6-209ENST00000477377 FHOD3Q2V2M9 1422 aa25.78■■□□□ 1.72
COMMD6-209ENST00000477377 ATP10BO94823 1461 aa25.76■■□□□ 1.71
COMMD6-209ENST00000477377 WDR7Q9Y4E6 1490 aa25.76■■□□□ 1.71
COMMD6-209ENST00000477377 TSPOAP1O95153 1857 aa25.75■■□□□ 1.71
COMMD6-209ENST00000477377 PPRC1Q5VV67 1664 aaKnown RBP25.75■■□□□ 1.71
COMMD6-209ENST00000477377 UBTFP17480 764 aaKnown RBP25.74■■□□□ 1.71
COMMD6-209ENST00000477377 EFCAB5A4FU69 1503 aa25.71■■□□□ 1.71
COMMD6-209ENST00000477377 RAPGEF6Q8TEU7 1601 aa25.7■■□□□ 1.71
COMMD6-209ENST00000477377 ARID3CA6NKF2 412 aa25.7■■□□□ 1.7
COMMD6-209ENST00000477377 MAP3K4Q9Y6R4 1608 aa25.7■■□□□ 1.7
COMMD6-209ENST00000477377 NUP153P49790 1475 aaKnown RBP25.67■■□□□ 1.7
COMMD6-209ENST00000477377 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
COMMD6-209ENST00000477377 KCNH8Q96L42 1107 aa25.64■■□□□ 1.7
COMMD6-209ENST00000477377 KDM6BO15054 1643 aa25.61■■□□□ 1.69
COMMD6-209ENST00000477377 COL17A1Q9UMD9 1497 aaPredicted RBP25.6■■□□□ 1.69
COMMD6-209ENST00000477377 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
COMMD6-209ENST00000477377 MAGI3Q5TCQ9 1506 aa25.54■■□□□ 1.68
COMMD6-209ENST00000477377 CFAP43Q8NDM7 1665 aa25.53■■□□□ 1.68
COMMD6-209ENST00000477377 TEX14Q8IWB6 1497 aa25.52■■□□□ 1.68
COMMD6-209ENST00000477377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.49■■□□□ 1.67
COMMD6-209ENST00000477377 HNRNPUL2Q1KMD3 747 aaKnown RBP25.49■■□□□ 1.67
COMMD6-209ENST00000477377 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
COMMD6-209ENST00000477377 ABCA9Q8IUA7 1624 aa25.47■■□□□ 1.67
COMMD6-209ENST00000477377 CDK13Q14004 1512 aaKnown RBP25.44■■□□□ 1.66
COMMD6-209ENST00000477377 PLEKHD1A6NEE1 506 aa25.43■■□□□ 1.66
COMMD6-209ENST00000477377 HECW1Q76N89 1606 aa25.36■■□□□ 1.65
COMMD6-209ENST00000477377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.34■■□□□ 1.65
COMMD6-209ENST00000477377 LRRIQ1Q96JM4 1722 aa25.34■■□□□ 1.65
COMMD6-209ENST00000477377 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
COMMD6-209ENST00000477377 CLIP1P30622 1438 aa25.33■■□□□ 1.65
COMMD6-209ENST00000477377 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
COMMD6-209ENST00000477377 CASKIN1Q8WXD9 1431 aa25.3■■□□□ 1.64
COMMD6-209ENST00000477377 KDM4FA0A1W2PPD8 638 aa25.3■■□□□ 1.64
COMMD6-209ENST00000477377 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
COMMD6-209ENST00000477377 TTC37Q6PGP7 1564 aa25.28■■□□□ 1.64
COMMD6-209ENST00000477377 NEO1Q92859 1461 aa25.28■■□□□ 1.64
COMMD6-209ENST00000477377 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
COMMD6-209ENST00000477377 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
COMMD6-209ENST00000477377 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
COMMD6-209ENST00000477377 TROQ12816 1431 aaPredicted RBP25.22■■□□□ 1.63
COMMD6-209ENST00000477377 RAPGEF3O95398 923 aa25.21■■□□□ 1.63
COMMD6-209ENST00000477377 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
COMMD6-209ENST00000477377 PLCH2O75038 1416 aa25.2■■□□□ 1.62
COMMD6-209ENST00000477377 KIF14Q15058 1648 aa25.19■■□□□ 1.62
COMMD6-209ENST00000477377 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
COMMD6-209ENST00000477377 AKNAQ7Z591 1439 aa25.19■■□□□ 1.62
COMMD6-209ENST00000477377 FANCAO15360 1455 aa25.18■■□□□ 1.62
COMMD6-209ENST00000477377 CEP162Q5TB80 1403 aa25.18■■□□□ 1.62
COMMD6-209ENST00000477377 FRMPD1Q5SYB0 1578 aa25.18■■□□□ 1.62
COMMD6-209ENST00000477377 CCDC18Q5T9S5 1454 aa25.16■■□□□ 1.62
COMMD6-209ENST00000477377 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
COMMD6-209ENST00000477377 DENND4BO75064 1496 aaPredicted RBP25.09■■□□□ 1.61
COMMD6-209ENST00000477377 CFAP74Q9C0B2 1584 aa25.08■■□□□ 1.61
COMMD6-209ENST00000477377 RICTORQ6R327 1708 aa25.08■■□□□ 1.61
COMMD6-209ENST00000477377 MYO5CQ9NQX4 1742 aa25.06■■□□□ 1.6
COMMD6-209ENST00000477377 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
COMMD6-209ENST00000477377 SCAPERQ9BY12 1400 aa25.03■■□□□ 1.6
COMMD6-209ENST00000477377 CDC42BPBQ9Y5S2 1711 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms