RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
ACTN4-205ENST00000477174 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
ACTN4-205ENST00000477174 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
ACTN4-205ENST00000477174 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
ACTN4-205ENST00000477174 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
ACTN4-205ENST00000477174 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
ACTN4-205ENST00000477174 EEA1Q15075 1411 aa22.47■■□□□ 1.19
ACTN4-205ENST00000477174 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
ACTN4-205ENST00000477174 CARMIL2Q6F5E8 1435 aa22.38■■□□□ 1.17
ACTN4-205ENST00000477174 IQGAP2Q13576 1575 aa22.38■■□□□ 1.17
ACTN4-205ENST00000477174 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
ACTN4-205ENST00000477174 TRHP20396 242 aaPredicted RBP22.33■■□□□ 1.17
ACTN4-205ENST00000477174 PTPRGP23470 1445 aa22.32■■□□□ 1.16
ACTN4-205ENST00000477174 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
ACTN4-205ENST00000477174 UGGT2Q9NYU1 1516 aa22.29■■□□□ 1.16
ACTN4-205ENST00000477174 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
ACTN4-205ENST00000477174 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
ACTN4-205ENST00000477174 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
ACTN4-205ENST00000477174 GOLGA3Q08378 1498 aa22.21■■□□□ 1.15
ACTN4-205ENST00000477174 CTTNBP2Q8WZ74 1663 aa22.17■■□□□ 1.14
ACTN4-205ENST00000477174 KIAA0556O60303 1618 aa22.14■■□□□ 1.14
ACTN4-205ENST00000477174 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
ACTN4-205ENST00000477174 KIF21BO75037 1637 aa22.13■■□□□ 1.13
ACTN4-205ENST00000477174 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
ACTN4-205ENST00000477174 UHRF1BP1LA0JNW5 1464 aa22.11■■□□□ 1.13
ACTN4-205ENST00000477174 UBTFP17480 764 aaKnown RBP22.1■■□□□ 1.13
ACTN4-205ENST00000477174 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
ACTN4-205ENST00000477174 P3H3Q8IVL6 736 aa22.07■■□□□ 1.12
ACTN4-205ENST00000477174 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
ACTN4-205ENST00000477174 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
ACTN4-205ENST00000477174 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
ACTN4-205ENST00000477174 FAM69CQ0P6D2 419 aa22.02■■□□□ 1.12
ACTN4-205ENST00000477174 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
ACTN4-205ENST00000477174 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
ACTN4-205ENST00000477174 KDM5BQ9UGL1 1544 aa21.99■■□□□ 1.11
ACTN4-205ENST00000477174 SAMD9Q5K651 1589 aa21.97■■□□□ 1.11
ACTN4-205ENST00000477174 ASXL2Q76L83 1435 aa21.95■■□□□ 1.1
ACTN4-205ENST00000477174 ABCA8O94911 1581 aa21.94■■□□□ 1.1
ACTN4-205ENST00000477174 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
ACTN4-205ENST00000477174 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.09
ACTN4-205ENST00000477174 DIP2BQ9P265 1576 aa21.87■■□□□ 1.09
ACTN4-205ENST00000477174 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
ACTN4-205ENST00000477174 ZCCHC11Q5TAX3 1644 aaKnown RBP21.84■■□□□ 1.09
ACTN4-205ENST00000477174 ATP10BO94823 1461 aa21.83■■□□□ 1.08
ACTN4-205ENST00000477174 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
ACTN4-205ENST00000477174 WDR7Q9Y4E6 1490 aa21.81■■□□□ 1.08
ACTN4-205ENST00000477174 EPRSP07814 1512 aaKnown RBP21.8■■□□□ 1.08
ACTN4-205ENST00000477174 GLI2P10070 1586 aa21.79■■□□□ 1.08
ACTN4-205ENST00000477174 ARHGAP35Q9NRY4 1499 aa21.79■■□□□ 1.08
ACTN4-205ENST00000477174 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
ACTN4-205ENST00000477174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
ACTN4-205ENST00000477174 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
ACTN4-205ENST00000477174 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.08
ACTN4-205ENST00000477174 FMN1Q68DA7 1419 aa21.77■■□□□ 1.08
ACTN4-205ENST00000477174 NUP153P49790 1475 aaKnown RBP21.76■■□□□ 1.07
ACTN4-205ENST00000477174 PLEKHD1A6NEE1 506 aa21.72■■□□□ 1.07
ACTN4-205ENST00000477174 ATP1B4Q9UN42 357 aaPredicted RBP21.69■■□□□ 1.06
ACTN4-205ENST00000477174 CLIP1P30622 1438 aa21.68■■□□□ 1.06
ACTN4-205ENST00000477174 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
ACTN4-205ENST00000477174 MAP3K4Q9Y6R4 1608 aa21.63■■□□□ 1.05
ACTN4-205ENST00000477174 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
ACTN4-205ENST00000477174 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
ACTN4-205ENST00000477174 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
ACTN4-205ENST00000477174 TEX14Q8IWB6 1497 aa21.63■■□□□ 1.05
ACTN4-205ENST00000477174 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
ACTN4-205ENST00000477174 CASKIN1Q8WXD9 1431 aa21.57■■□□□ 1.04
ACTN4-205ENST00000477174 PPRC1Q5VV67 1664 aaKnown RBP21.56■■□□□ 1.04
ACTN4-205ENST00000477174 HECW1Q76N89 1606 aa21.56■■□□□ 1.04
ACTN4-205ENST00000477174 CFAP43Q8NDM7 1665 aa21.55■■□□□ 1.04
ACTN4-205ENST00000477174 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
ACTN4-205ENST00000477174 KDM6BO15054 1643 aa21.54■■□□□ 1.04
ACTN4-205ENST00000477174 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
ACTN4-205ENST00000477174 PHLDB1Q86UU1 1377 aa21.52■■□□□ 1.04
ACTN4-205ENST00000477174 ABCA9Q8IUA7 1624 aa21.51■■□□□ 1.03
ACTN4-205ENST00000477174 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
ACTN4-205ENST00000477174 FYCO1Q9BQS8 1478 aa21.48■■□□□ 1.03
ACTN4-205ENST00000477174 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
ACTN4-205ENST00000477174 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
ACTN4-205ENST00000477174 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
ACTN4-205ENST00000477174 NEO1Q92859 1461 aa21.43■■□□□ 1.02
ACTN4-205ENST00000477174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.43■■□□□ 1.02
ACTN4-205ENST00000477174 ARAP3Q8WWN8 1544 aa21.42■■□□□ 1.02
ACTN4-205ENST00000477174 PLCH2O75038 1416 aa21.39■■□□□ 1.02
ACTN4-205ENST00000477174 EFCAB2Q5VUJ9 269 aa21.37■■□□□ 1.01
ACTN4-205ENST00000477174 FANCAO15360 1455 aa21.36■■□□□ 1.01
ACTN4-205ENST00000477174 RAPGEF3O95398 923 aa21.35■■□□□ 1.01
ACTN4-205ENST00000477174 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
ACTN4-205ENST00000477174 TTC37Q6PGP7 1564 aa21.35■■□□□ 1.01
ACTN4-205ENST00000477174 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
ACTN4-205ENST00000477174 KIF14Q15058 1648 aa21.32■■□□□ 1
ACTN4-205ENST00000477174 VPS8Q8N3P4 1428 aa21.29■■□□□ 1
ACTN4-205ENST00000477174 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
ACTN4-205ENST00000477174 DENND4BO75064 1496 aaPredicted RBP21.28■■□□□ 1
ACTN4-205ENST00000477174 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
ACTN4-205ENST00000477174 CFAP74Q9C0B2 1584 aa21.26■□□□□ 0.99
ACTN4-205ENST00000477174 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
ACTN4-205ENST00000477174 ADGRL1O94910 1474 aa21.23■□□□□ 0.99
ACTN4-205ENST00000477174 KDM4FA0A1W2PPD8 638 aa21.22■□□□□ 0.99
ACTN4-205ENST00000477174 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
ACTN4-205ENST00000477174 MYO5CQ9NQX4 1742 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms