RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 FBLN2P98095 1184 aa10.21□□□□□ -0.77
CCDC30-209ENST00000477155 GRIN2BQ13224 1484 aa10.2□□□□□ -0.78
CCDC30-209ENST00000477155 HRCP23327 699 aa10.19□□□□□ -0.78
CCDC30-209ENST00000477155 KANK4Q5T7N3 995 aaPredicted RBP10.19□□□□□ -0.78
CCDC30-209ENST00000477155 FHAD1B1AJZ9 1412 aa10.18□□□□□ -0.78
CCDC30-209ENST00000477155 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
CCDC30-209ENST00000477155 FHOD3Q2V2M9 1422 aa10.17□□□□□ -0.78
CCDC30-209ENST00000477155 CHMP7Q8WUX9 453 aaPredicted RBP10.17□□□□□ -0.78
CCDC30-209ENST00000477155 SNAPC4Q5SXM2 1469 aa10.15□□□□□ -0.78
CCDC30-209ENST00000477155 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.79
CCDC30-209ENST00000477155 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
CCDC30-209ENST00000477155 ADAMTS12P58397 1594 aa10.13□□□□□ -0.79
CCDC30-209ENST00000477155 CTTNBP2Q8WZ74 1663 aa10.13□□□□□ -0.79
CCDC30-209ENST00000477155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.11□□□□□ -0.79
CCDC30-209ENST00000477155 GRIN2AQ12879 1464 aa10.08□□□□□ -0.8
CCDC30-209ENST00000477155 EFCAB5A4FU69 1503 aa10.08□□□□□ -0.8
CCDC30-209ENST00000477155 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
CCDC30-209ENST00000477155 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
CCDC30-209ENST00000477155 IQGAP2Q13576 1575 aa10.06□□□□□ -0.8
CCDC30-209ENST00000477155 SYNJ2O15056 1496 aa10.06□□□□□ -0.8
CCDC30-209ENST00000477155 FMN1Q68DA7 1419 aa10.06□□□□□ -0.8
CCDC30-209ENST00000477155 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
CCDC30-209ENST00000477155 PCF11O94913 1555 aaKnown RBP10.05□□□□□ -0.8
CCDC30-209ENST00000477155 ITGAEP38570 1179 aa10.05□□□□□ -0.8
CCDC30-209ENST00000477155 KIAA0586Q9BVV6 1533 aa10.04□□□□□ -0.8
CCDC30-209ENST00000477155 CASKIN1Q8WXD9 1431 aa10.04□□□□□ -0.8
CCDC30-209ENST00000477155 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
CCDC30-209ENST00000477155 SAMD9Q5K651 1589 aa10.04□□□□□ -0.8
CCDC30-209ENST00000477155 TIAM1Q13009 1591 aa10.03□□□□□ -0.8
CCDC30-209ENST00000477155 LRRC9Q6ZRR7 1453 aa10.02□□□□□ -0.81
CCDC30-209ENST00000477155 FYCO1Q9BQS8 1478 aa10.02□□□□□ -0.81
CCDC30-209ENST00000477155 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
CCDC30-209ENST00000477155 MTUS2Q5JR59 1369 aa9.99□□□□□ -0.81
CCDC30-209ENST00000477155 FAM50AQ14320 339 aaKnown RBP9.99□□□□□ -0.81
CCDC30-209ENST00000477155 UGGT2Q9NYU1 1516 aa9.99□□□□□ -0.81
CCDC30-209ENST00000477155 MAP3K1Q13233 1512 aa9.99□□□□□ -0.81
CCDC30-209ENST00000477155 DISP1Q96F81 1524 aa9.98□□□□□ -0.81
CCDC30-209ENST00000477155 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
CCDC30-209ENST00000477155 ZEB1P37275 1124 aaPredicted RBP9.98□□□□□ -0.81
CCDC30-209ENST00000477155 CCNB3Q8WWL7 1395 aa9.98□□□□□ -0.81
CCDC30-209ENST00000477155 NUP160Q12769 1436 aa9.98□□□□□ -0.81
CCDC30-209ENST00000477155 RRBP1Q9P2E9 1410 aaKnown RBP9.96□□□□□ -0.82
CCDC30-209ENST00000477155 KIAA0556O60303 1618 aa9.95□□□□□ -0.82
CCDC30-209ENST00000477155 CFAP43Q8NDM7 1665 aa9.94□□□□□ -0.82
CCDC30-209ENST00000477155 CARMIL2Q6F5E8 1435 aa9.94□□□□□ -0.82
CCDC30-209ENST00000477155 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
CCDC30-209ENST00000477155 CDK13Q14004 1512 aaKnown RBP9.93□□□□□ -0.82
CCDC30-209ENST00000477155 PRG4Q92954 1404 aaPredicted RBP9.92□□□□□ -0.82
CCDC30-209ENST00000477155 EPRSP07814 1512 aaKnown RBP9.92□□□□□ -0.82
CCDC30-209ENST00000477155 CHD1O14646 1710 aa9.92□□□□□ -0.82
CCDC30-209ENST00000477155 PLB1Q6P1J6 1458 aa9.91□□□□□ -0.82
CCDC30-209ENST00000477155 HECW1Q76N89 1606 aa9.9□□□□□ -0.82
CCDC30-209ENST00000477155 MAGI3Q5TCQ9 1506 aa9.89□□□□□ -0.83
CCDC30-209ENST00000477155 CCDC18Q5T9S5 1454 aa9.89□□□□□ -0.83
CCDC30-209ENST00000477155 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
CCDC30-209ENST00000477155 NUP153P49790 1475 aaKnown RBP9.88□□□□□ -0.83
CCDC30-209ENST00000477155 CDK11AQ9UQ88 783 aaPredicted RBP9.88□□□□□ -0.83
CCDC30-209ENST00000477155 PTPRGP23470 1445 aa9.88□□□□□ -0.83
CCDC30-209ENST00000477155 RAPGEF6Q8TEU7 1601 aa9.87□□□□□ -0.83
CCDC30-209ENST00000477155 FGD6Q6ZV73 1430 aa9.87□□□□□ -0.83
CCDC30-209ENST00000477155 EHBP1L1Q8N3D4 1523 aa9.86□□□□□ -0.83
CCDC30-209ENST00000477155 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
CCDC30-209ENST00000477155 SUPT6HQ7KZ85 1726 aaKnown RBP9.84□□□□□ -0.83
CCDC30-209ENST00000477155 PLEKHD1A6NEE1 506 aa9.84□□□□□ -0.83
CCDC30-209ENST00000477155 CHIC2Q9UKJ5 165 aa9.84□□□□□ -0.83
CCDC30-209ENST00000477155 ERCC6L2Q5T890 1561 aa9.83□□□□□ -0.84
CCDC30-209ENST00000477155 RAB3GAP2Q9H2M9 1393 aa9.82□□□□□ -0.84
CCDC30-209ENST00000477155 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
CCDC30-209ENST00000477155 ZNF644Q9H582 1327 aaPredicted RBP9.81□□□□□ -0.84
CCDC30-209ENST00000477155 ATP10BO94823 1461 aa9.81□□□□□ -0.84
CCDC30-209ENST00000477155 SETD5Q9C0A6 1442 aa9.81□□□□□ -0.84
CCDC30-209ENST00000477155 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
CCDC30-209ENST00000477155 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
CCDC30-209ENST00000477155 PTPRKQ15262 1439 aa9.8□□□□□ -0.84
CCDC30-209ENST00000477155 TROQ12816 1431 aaPredicted RBP9.79□□□□□ -0.84
CCDC30-209ENST00000477155 ABCA8O94911 1581 aa9.79□□□□□ -0.84
CCDC30-209ENST00000477155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC30-209ENST00000477155 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
CCDC30-209ENST00000477155 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
CCDC30-209ENST00000477155 ARHGEF11O15085 1522 aa9.79□□□□□ -0.84
CCDC30-209ENST00000477155 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
CCDC30-209ENST00000477155 KCNH8Q96L42 1107 aa9.78□□□□□ -0.84
CCDC30-209ENST00000477155 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
CCDC30-209ENST00000477155 PTPN23Q9H3S7 1636 aa9.78□□□□□ -0.84
CCDC30-209ENST00000477155 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.85
CCDC30-209ENST00000477155 MIA2Q96PC5 1412 aa9.75□□□□□ -0.85
CCDC30-209ENST00000477155 KIF14Q15058 1648 aa9.75□□□□□ -0.85
CCDC30-209ENST00000477155 GPATCH8Q9UKJ3 1502 aaKnown RBP9.73□□□□□ -0.85
CCDC30-209ENST00000477155 TCOF1Q13428 1488 aaKnown RBP9.73□□□□□ -0.85
CCDC30-209ENST00000477155 NEUROD1Q13562 356 aa9.72□□□□□ -0.85
CCDC30-209ENST00000477155 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
CCDC30-209ENST00000477155 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.85
CCDC30-209ENST00000477155 SIN3AQ96ST3 1273 aa9.71□□□□□ -0.85
CCDC30-209ENST00000477155 NAIPQ13075 1403 aa9.71□□□□□ -0.85
CCDC30-209ENST00000477155 HFM1A2PYH4 1435 aa9.71□□□□□ -0.86
CCDC30-209ENST00000477155 ABCC2Q92887 1545 aa9.7□□□□□ -0.86
CCDC30-209ENST00000477155 HNRNPMP52272 730 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC30-209ENST00000477155 ABCC5O15440 1437 aa9.69□□□□□ -0.86
CCDC30-209ENST00000477155 DAPK1P53355 1430 aa9.69□□□□□ -0.86
CCDC30-209ENST00000477155 CAMSAP2Q08AD1 1489 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms