RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 SHROOM2Q13796 1616 aa21.06■□□□□ 0.96
PRKD3-209ENST00000477132 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
PRKD3-209ENST00000477132 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
PRKD3-209ENST00000477132 CYB5RLQ6IPT4 315 aa21.02■□□□□ 0.96
PRKD3-209ENST00000477132 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
PRKD3-209ENST00000477132 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
PRKD3-209ENST00000477132 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
PRKD3-209ENST00000477132 JPH4Q96JJ6 628 aa20.86■□□□□ 0.93
PRKD3-209ENST00000477132 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
PRKD3-209ENST00000477132 IQGAP2Q13576 1575 aa20.8■□□□□ 0.92
PRKD3-209ENST00000477132 PRXQ9BXM0 1461 aa20.78■□□□□ 0.92
PRKD3-209ENST00000477132 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
PRKD3-209ENST00000477132 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
PRKD3-209ENST00000477132 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
PRKD3-209ENST00000477132 EEA1Q15075 1411 aa20.67■□□□□ 0.9
PRKD3-209ENST00000477132 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
PRKD3-209ENST00000477132 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
PRKD3-209ENST00000477132 KIAA0556O60303 1618 aa20.64■□□□□ 0.89
PRKD3-209ENST00000477132 CARMIL2Q6F5E8 1435 aa20.62■□□□□ 0.89
PRKD3-209ENST00000477132 TRHP20396 242 aaPredicted RBP20.6■□□□□ 0.89
PRKD3-209ENST00000477132 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
PRKD3-209ENST00000477132 TNIKQ9UKE5 1360 aa20.59■□□□□ 0.89
PRKD3-209ENST00000477132 PTPRGP23470 1445 aa20.58■□□□□ 0.88
PRKD3-209ENST00000477132 KIF21BO75037 1637 aa20.56■□□□□ 0.88
PRKD3-209ENST00000477132 TTBK1Q5TCY1 1321 aaPredicted RBP20.54■□□□□ 0.88
PRKD3-209ENST00000477132 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
PRKD3-209ENST00000477132 MAPKBP1O60336 1514 aa20.5■□□□□ 0.87
PRKD3-209ENST00000477132 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
PRKD3-209ENST00000477132 GOLGA3Q08378 1498 aa20.49■□□□□ 0.87
PRKD3-209ENST00000477132 UHRF1BP1LA0JNW5 1464 aa20.47■□□□□ 0.87
PRKD3-209ENST00000477132 ABCC2Q92887 1545 aa20.47■□□□□ 0.87
PRKD3-209ENST00000477132 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
PRKD3-209ENST00000477132 UACAQ9BZF9 1416 aa20.46■□□□□ 0.87
PRKD3-209ENST00000477132 MSH5O43196 834 aa20.46■□□□□ 0.87
PRKD3-209ENST00000477132 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
PRKD3-209ENST00000477132 DIP2BQ9P265 1576 aa20.42■□□□□ 0.86
PRKD3-209ENST00000477132 NPM1P06748 294 aaKnown RBP eCLIP20.42■□□□□ 0.86
PRKD3-209ENST00000477132 PLB1Q6P1J6 1458 aa20.42■□□□□ 0.86
PRKD3-209ENST00000477132 ABCA8O94911 1581 aa20.41■□□□□ 0.86
PRKD3-209ENST00000477132 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
PRKD3-209ENST00000477132 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
PRKD3-209ENST00000477132 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
PRKD3-209ENST00000477132 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
PRKD3-209ENST00000477132 P3H3Q8IVL6 736 aa20.36■□□□□ 0.85
PRKD3-209ENST00000477132 EHMT2Q96KQ7 1210 aa20.36■□□□□ 0.85
PRKD3-209ENST00000477132 ASXL2Q76L83 1435 aa20.34■□□□□ 0.85
PRKD3-209ENST00000477132 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
PRKD3-209ENST00000477132 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
PRKD3-209ENST00000477132 FAM69CQ0P6D2 419 aa20.31■□□□□ 0.84
PRKD3-209ENST00000477132 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
PRKD3-209ENST00000477132 EFCAB5A4FU69 1503 aa20.3■□□□□ 0.84
PRKD3-209ENST00000477132 TSPOAP1O95153 1857 aa20.28■□□□□ 0.84
PRKD3-209ENST00000477132 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.84
PRKD3-209ENST00000477132 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
PRKD3-209ENST00000477132 GLI2P10070 1586 aa20.25■□□□□ 0.83
PRKD3-209ENST00000477132 ADRA2BP18089 450 aa20.24■□□□□ 0.83
PRKD3-209ENST00000477132 EPRSP07814 1512 aaKnown RBP20.23■□□□□ 0.83
PRKD3-209ENST00000477132 PPRC1Q5VV67 1664 aaKnown RBP20.23■□□□□ 0.83
PRKD3-209ENST00000477132 WDR7Q9Y4E6 1490 aa20.22■□□□□ 0.83
PRKD3-209ENST00000477132 MAP3K4Q9Y6R4 1608 aa20.2■□□□□ 0.82
PRKD3-209ENST00000477132 ATP10BO94823 1461 aa20.2■□□□□ 0.82
PRKD3-209ENST00000477132 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
PRKD3-209ENST00000477132 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
PRKD3-209ENST00000477132 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
PRKD3-209ENST00000477132 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
PRKD3-209ENST00000477132 KDM6BO15054 1643 aa20.1■□□□□ 0.81
PRKD3-209ENST00000477132 FMN1Q68DA7 1419 aa20.06■□□□□ 0.8
PRKD3-209ENST00000477132 LRRIQ1Q96JM4 1722 aa20.06■□□□□ 0.8
PRKD3-209ENST00000477132 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
PRKD3-209ENST00000477132 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
PRKD3-209ENST00000477132 HECW1Q76N89 1606 aa20.05■□□□□ 0.8
PRKD3-209ENST00000477132 ABCA9Q8IUA7 1624 aa20.04■□□□□ 0.8
PRKD3-209ENST00000477132 PCF11O94913 1555 aaKnown RBP20.01■□□□□ 0.79
PRKD3-209ENST00000477132 TEX14Q8IWB6 1497 aa20.01■□□□□ 0.79
PRKD3-209ENST00000477132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
PRKD3-209ENST00000477132 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
PRKD3-209ENST00000477132 MAGI3Q5TCQ9 1506 aa20.01■□□□□ 0.79
PRKD3-209ENST00000477132 CD109Q6YHK3 1445 aa20.01■□□□□ 0.79
PRKD3-209ENST00000477132 CLIP1P30622 1438 aa20■□□□□ 0.79
PRKD3-209ENST00000477132 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
PRKD3-209ENST00000477132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.93■□□□□ 0.78
PRKD3-209ENST00000477132 TTC37Q6PGP7 1564 aa19.93■□□□□ 0.78
PRKD3-209ENST00000477132 ATP1B4Q9UN42 357 aaPredicted RBP19.92■□□□□ 0.78
PRKD3-209ENST00000477132 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
PRKD3-209ENST00000477132 PLEKHD1A6NEE1 506 aa19.91■□□□□ 0.78
PRKD3-209ENST00000477132 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
PRKD3-209ENST00000477132 KIF14Q15058 1648 aa19.88■□□□□ 0.77
PRKD3-209ENST00000477132 FYCO1Q9BQS8 1478 aa19.88■□□□□ 0.77
PRKD3-209ENST00000477132 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
PRKD3-209ENST00000477132 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
PRKD3-209ENST00000477132 ARAP3Q8WWN8 1544 aa19.83■□□□□ 0.77
PRKD3-209ENST00000477132 TROQ12816 1431 aaPredicted RBP19.83■□□□□ 0.76
PRKD3-209ENST00000477132 NEO1Q92859 1461 aa19.82■□□□□ 0.76
PRKD3-209ENST00000477132 MYO5CQ9NQX4 1742 aa19.82■□□□□ 0.76
PRKD3-209ENST00000477132 FRMPD1Q5SYB0 1578 aa19.8■□□□□ 0.76
PRKD3-209ENST00000477132 CFAP74Q9C0B2 1584 aa19.78■□□□□ 0.76
PRKD3-209ENST00000477132 FANCAO15360 1455 aa19.78■□□□□ 0.76
PRKD3-209ENST00000477132 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
PRKD3-209ENST00000477132 PHLDB1Q86UU1 1377 aa19.76■□□□□ 0.75
PRKD3-209ENST00000477132 RICTORQ6R327 1708 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms