RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 RTL5Q5HYW3 569 aaPredicted RBP30.31■■■□□ 2.44
TMEM42-202ENST00000477126 ATP1B4Q9UN42 357 aaPredicted RBP30.3■■■□□ 2.44
TMEM42-202ENST00000477126 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
TMEM42-202ENST00000477126 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
TMEM42-202ENST00000477126 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
TMEM42-202ENST00000477126 RAB3GAP2Q9H2M9 1393 aa30.27■■■□□ 2.44
TMEM42-202ENST00000477126 FAM9BQ8IZU0 186 aa30.24■■■□□ 2.43
TMEM42-202ENST00000477126 NPM2Q86SE8 214 aaKnown RBP30.23■■■□□ 2.43
TMEM42-202ENST00000477126 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
TMEM42-202ENST00000477126 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
TMEM42-202ENST00000477126 CCER2I3L3R5 266 aa30.19■■■□□ 2.42
TMEM42-202ENST00000477126 PPP4R2Q9NY27 417 aa30.17■■■□□ 2.42
TMEM42-202ENST00000477126 EIF5BO60841 1220 aaKnown RBP30.16■■■□□ 2.42
TMEM42-202ENST00000477126 KIF21BO75037 1637 aa30.15■■■□□ 2.42
TMEM42-202ENST00000477126 MYT1LQ9UL68 1186 aa30.15■■■□□ 2.42
TMEM42-202ENST00000477126 TOP2AP11388 1531 aaKnown RBP30.14■■■□□ 2.42
TMEM42-202ENST00000477126 CCNB3Q8WWL7 1395 aa30.13■■■□□ 2.41
TMEM42-202ENST00000477126 CCDC184Q52MB2 194 aa30.13■■■□□ 2.41
TMEM42-202ENST00000477126 LAS1LQ9Y4W2 734 aaKnown RBP30.12■■■□□ 2.41
TMEM42-202ENST00000477126 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
TMEM42-202ENST00000477126 ZBTB47Q9UFB7 747 aaPredicted RBP30.04■■■□□ 2.4
TMEM42-202ENST00000477126 ANP32AP39687 249 aaKnown RBP30.02■■■□□ 2.4
TMEM42-202ENST00000477126 MAPKBP1O60336 1514 aa29.95■■■□□ 2.39
TMEM42-202ENST00000477126 P3H3Q8IVL6 736 aa29.94■■■□□ 2.38
TMEM42-202ENST00000477126 BICRAQ9NZM4 1560 aa29.87■■■□□ 2.37
TMEM42-202ENST00000477126 NEFMP07197 916 aa29.86■■■□□ 2.37
TMEM42-202ENST00000477126 IPO9Q96P70 1041 aaKnown RBP29.86■■■□□ 2.37
TMEM42-202ENST00000477126 MRS2Q9HD23 443 aa29.86■■■□□ 2.37
TMEM42-202ENST00000477126 TONSLQ96HA7 1378 aa29.85■■■□□ 2.37
TMEM42-202ENST00000477126 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
TMEM42-202ENST00000477126 POLR3GLQ9BT43 218 aa29.84■■■□□ 2.37
TMEM42-202ENST00000477126 RRBP1Q9P2E9 1410 aaKnown RBP29.83■■■□□ 2.37
TMEM42-202ENST00000477126 SETD5Q9C0A6 1442 aa29.82■■■□□ 2.36
TMEM42-202ENST00000477126 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
TMEM42-202ENST00000477126 BRPF3Q9ULD4 1205 aa29.8■■■□□ 2.36
TMEM42-202ENST00000477126 ERICH6BQ5W0A0 696 aa29.76■■■□□ 2.36
TMEM42-202ENST00000477126 HSPA5P11021 654 aaKnown RBP29.67■■■□□ 2.34
TMEM42-202ENST00000477126 TIMELESSQ9UNS1 1208 aa29.65■■■□□ 2.34
TMEM42-202ENST00000477126 AKNAQ7Z591 1439 aa29.65■■■□□ 2.34
TMEM42-202ENST00000477126 WASHC2AQ641Q2 1341 aa29.64■■■□□ 2.34
TMEM42-202ENST00000477126 SKAP1Q86WV1 359 aa29.59■■■□□ 2.33
TMEM42-202ENST00000477126 PHLDB1Q86UU1 1377 aa29.59■■■□□ 2.33
TMEM42-202ENST00000477126 SLC4A3P48751 1232 aa29.58■■■□□ 2.33
TMEM42-202ENST00000477126 CUX2O14529 1486 aa29.54■■■□□ 2.32
TMEM42-202ENST00000477126 UBE2Q2Q8WVN8 375 aa29.53■■■□□ 2.32
TMEM42-202ENST00000477126 C11orf95C9JLR9 678 aaPredicted RBP29.52■■■□□ 2.32
TMEM42-202ENST00000477126 PRKRIP1Q9H875 184 aaPredicted RBP29.48■■■□□ 2.31
TMEM42-202ENST00000477126 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
TMEM42-202ENST00000477126 FOXD1Q16676 465 aa29.44■■■□□ 2.3
TMEM42-202ENST00000477126 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
TMEM42-202ENST00000477126 PEG3Q9GZU2 1588 aa29.43■■■□□ 2.3
TMEM42-202ENST00000477126 ZBED9Q6R2W3 1325 aa29.41■■■□□ 2.3
TMEM42-202ENST00000477126 EIF4G2P78344 907 aaKnown RBP eCLIP29.4■■■□□ 2.3
TMEM42-202ENST00000477126 ARHGAP35Q9NRY4 1499 aa29.37■■■□□ 2.29
TMEM42-202ENST00000477126 ARXQ96QS3 562 aa29.36■■■□□ 2.29
TMEM42-202ENST00000477126 RRP7BPQ9NSQ0 103 aa29.36■■■□□ 2.29
TMEM42-202ENST00000477126 EXOC6Q8TAG9 804 aa29.33■■■□□ 2.29
TMEM42-202ENST00000477126 PDE4AP27815 886 aa29.33■■■□□ 2.29
TMEM42-202ENST00000477126 ZNF326Q5BKZ1 582 aaKnown RBP29.31■■■□□ 2.28
TMEM42-202ENST00000477126 FRAT1Q92837 279 aaPredicted RBP29.3■■■□□ 2.28
TMEM42-202ENST00000477126 NUDCQ9Y266 331 aa29.26■■■□□ 2.28
TMEM42-202ENST00000477126 GSE1Q14687 1217 aa29.26■■■□□ 2.27
TMEM42-202ENST00000477126 PRXQ9BXM0 1461 aa29.25■■■□□ 2.27
TMEM42-202ENST00000477126 DAXXQ9UER7 740 aaPredicted RBP29.23■■■□□ 2.27
TMEM42-202ENST00000477126 NFKBIBQ15653 356 aa29.19■■■□□ 2.26
TMEM42-202ENST00000477126 PPM1GO15355 546 aaPredicted RBP29.17■■■□□ 2.26
TMEM42-202ENST00000477126 PLIN1O60240 522 aa29.17■■■□□ 2.26
TMEM42-202ENST00000477126 L3MBTL2Q969R5 705 aa29.17■■■□□ 2.26
TMEM42-202ENST00000477126 CNTLNQ9NXG0 1405 aa29.14■■■□□ 2.26
TMEM42-202ENST00000477126 LRRC9Q6ZRR7 1453 aa29.14■■■□□ 2.26
TMEM42-202ENST00000477126 WASHC2CQ9Y4E1 1318 aa29.11■■■□□ 2.25
TMEM42-202ENST00000477126 TMC1Q8TDI8 760 aa29.1■■■□□ 2.25
TMEM42-202ENST00000477126 ARID3CA6NKF2 412 aa29.1■■■□□ 2.25
TMEM42-202ENST00000477126 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.25
TMEM42-202ENST00000477126 PKNOX2Q96KN3 472 aa29.09■■■□□ 2.25
TMEM42-202ENST00000477126 USP35Q9P2H5 1018 aa29.09■■■□□ 2.25
TMEM42-202ENST00000477126 CCDC18Q5T9S5 1454 aa29.09■■■□□ 2.25
TMEM42-202ENST00000477126 BACH2Q9BYV9 841 aa29.08■■■□□ 2.25
TMEM42-202ENST00000477126 CCDC7Q96M83 1385 aa29.08■■■□□ 2.25
TMEM42-202ENST00000477126 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
TMEM42-202ENST00000477126 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
TMEM42-202ENST00000477126 KIF7Q2M1P5 1343 aa29.05■■■□□ 2.24
TMEM42-202ENST00000477126 FRAT2O75474 233 aaPredicted RBP29.05■■■□□ 2.24
TMEM42-202ENST00000477126 TIAM1Q13009 1591 aa29.04■■■□□ 2.24
TMEM42-202ENST00000477126 TCERG1O14776 1098 aaKnown RBP29.02■■■□□ 2.24
TMEM42-202ENST00000477126 NBPF8Q3BBV2 869 aa29.02■■■□□ 2.24
TMEM42-202ENST00000477126 DCAF11Q8TEB1 546 aa29.02■■■□□ 2.24
TMEM42-202ENST00000477126 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
TMEM42-202ENST00000477126 SMG6Q86US8 1419 aaKnown RBP29■■■□□ 2.23
TMEM42-202ENST00000477126 VSIG10Q8N0Z9 540 aa28.99■■■□□ 2.23
TMEM42-202ENST00000477126 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
TMEM42-202ENST00000477126 RRP1P56182 461 aaKnown RBP28.97■■■□□ 2.23
TMEM42-202ENST00000477126 ARID4BQ4LE39 1312 aaPredicted RBP28.97■■■□□ 2.23
TMEM42-202ENST00000477126 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
TMEM42-202ENST00000477126 FHOD3Q2V2M9 1422 aa28.95■■■□□ 2.22
TMEM42-202ENST00000477126 RCAN3Q9UKA8 241 aa28.93■■■□□ 2.22
TMEM42-202ENST00000477126 CDCA7LQ96GN5 454 aa28.92■■■□□ 2.22
TMEM42-202ENST00000477126 RGS3P49796 1198 aa28.89■■■□□ 2.22
TMEM42-202ENST00000477126 UACAQ9BZF9 1416 aa28.89■■■□□ 2.22
TMEM42-202ENST00000477126 MTUS2Q5JR59 1369 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms