RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PBRM1Q86U86 1689 aa17.47■□□□□ 0.39
NUP188-205ENST00000477069 RRBP1Q9P2E9 1410 aaKnown RBP17.46■□□□□ 0.39
NUP188-205ENST00000477069 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
NUP188-205ENST00000477069 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
NUP188-205ENST00000477069 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
NUP188-205ENST00000477069 FHAD1B1AJZ9 1412 aa17.42■□□□□ 0.38
NUP188-205ENST00000477069 SAMD9Q5K651 1589 aa17.42■□□□□ 0.38
NUP188-205ENST00000477069 WDR62O43379 1518 aa17.4■□□□□ 0.38
NUP188-205ENST00000477069 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.377e-7■■■■■ 38.6
NUP188-205ENST00000477069 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
NUP188-205ENST00000477069 LRRC9Q6ZRR7 1453 aa17.37■□□□□ 0.37
NUP188-205ENST00000477069 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
NUP188-205ENST00000477069 FHOD3Q2V2M9 1422 aa17.37■□□□□ 0.37
NUP188-205ENST00000477069 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
NUP188-205ENST00000477069 CASKIN1Q8WXD9 1431 aa17.34■□□□□ 0.37
NUP188-205ENST00000477069 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
NUP188-205ENST00000477069 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
NUP188-205ENST00000477069 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
NUP188-205ENST00000477069 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
NUP188-205ENST00000477069 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
NUP188-205ENST00000477069 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
NUP188-205ENST00000477069 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
NUP188-205ENST00000477069 P3H3Q8IVL6 736 aa17.27■□□□□ 0.36
NUP188-205ENST00000477069 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
NUP188-205ENST00000477069 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
NUP188-205ENST00000477069 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
NUP188-205ENST00000477069 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
NUP188-205ENST00000477069 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
NUP188-205ENST00000477069 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
NUP188-205ENST00000477069 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
NUP188-205ENST00000477069 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
NUP188-205ENST00000477069 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
NUP188-205ENST00000477069 HECW1Q76N89 1606 aa17.12■□□□□ 0.33
NUP188-205ENST00000477069 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
NUP188-205ENST00000477069 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
NUP188-205ENST00000477069 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
NUP188-205ENST00000477069 ARHGEF11O15085 1522 aa17.1■□□□□ 0.33
NUP188-205ENST00000477069 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
NUP188-205ENST00000477069 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
NUP188-205ENST00000477069 MAGI3Q5TCQ9 1506 aa17.09■□□□□ 0.33
NUP188-205ENST00000477069 KIAA0586Q9BVV6 1533 aa17.09■□□□□ 0.33
NUP188-205ENST00000477069 MAGI1Q96QZ7 1491 aaPredicted RBP17.09■□□□□ 0.33
NUP188-205ENST00000477069 KIAA0556O60303 1618 aa17.08■□□□□ 0.33
NUP188-205ENST00000477069 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
NUP188-205ENST00000477069 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
NUP188-205ENST00000477069 DISP1Q96F81 1524 aa17.06■□□□□ 0.32
NUP188-205ENST00000477069 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
NUP188-205ENST00000477069 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
NUP188-205ENST00000477069 MTUS2Q5JR59 1369 aa17.04■□□□□ 0.32
NUP188-205ENST00000477069 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
NUP188-205ENST00000477069 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
NUP188-205ENST00000477069 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
NUP188-205ENST00000477069 ITGAEP38570 1179 aa17.03■□□□□ 0.32
NUP188-205ENST00000477069 EPRSP07814 1512 aaKnown RBP17.03■□□□□ 0.32
NUP188-205ENST00000477069 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
NUP188-205ENST00000477069 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
NUP188-205ENST00000477069 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
NUP188-205ENST00000477069 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
NUP188-205ENST00000477069 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
NUP188-205ENST00000477069 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
NUP188-205ENST00000477069 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
NUP188-205ENST00000477069 NUP160Q12769 1436 aa16.96■□□□□ 0.31
NUP188-205ENST00000477069 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.3
NUP188-205ENST00000477069 PTPRKQ15262 1439 aa16.95■□□□□ 0.3
NUP188-205ENST00000477069 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
NUP188-205ENST00000477069 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
NUP188-205ENST00000477069 GCC2Q8IWJ2 1684 aa16.89■□□□□ 0.29
NUP188-205ENST00000477069 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
NUP188-205ENST00000477069 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
NUP188-205ENST00000477069 NAIPQ13075 1403 aa16.85■□□□□ 0.29
NUP188-205ENST00000477069 ADCY10Q96PN6 1610 aa16.83■□□□□ 0.29
NUP188-205ENST00000477069 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
NUP188-205ENST00000477069 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
NUP188-205ENST00000477069 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
NUP188-205ENST00000477069 ABCA8O94911 1581 aa16.8■□□□□ 0.28
NUP188-205ENST00000477069 CARMIL2Q6F5E8 1435 aa16.8■□□□□ 0.28
NUP188-205ENST00000477069 CHD1O14646 1710 aa16.8■□□□□ 0.28
NUP188-205ENST00000477069 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
NUP188-205ENST00000477069 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.28
NUP188-205ENST00000477069 JPH4Q96JJ6 628 aa16.77■□□□□ 0.27
NUP188-205ENST00000477069 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
NUP188-205ENST00000477069 KDM6BO15054 1643 aa16.76■□□□□ 0.27
NUP188-205ENST00000477069 FBLN2P98095 1184 aa16.76■□□□□ 0.27
NUP188-205ENST00000477069 KIF14Q15058 1648 aa16.75■□□□□ 0.27
NUP188-205ENST00000477069 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
NUP188-205ENST00000477069 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
NUP188-205ENST00000477069 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
NUP188-205ENST00000477069 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
NUP188-205ENST00000477069 PRG4Q92954 1404 aaPredicted RBP16.73■□□□□ 0.27
NUP188-205ENST00000477069 DAPK1P53355 1430 aa16.72■□□□□ 0.27
NUP188-205ENST00000477069 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
NUP188-205ENST00000477069 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
NUP188-205ENST00000477069 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
NUP188-205ENST00000477069 MIER1Q8N108 512 aa16.69■□□□□ 0.26
NUP188-205ENST00000477069 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
NUP188-205ENST00000477069 ABCC5O15440 1437 aa16.69■□□□□ 0.26
NUP188-205ENST00000477069 CDC42BPAQ5VT25 1732 aa16.68■□□□□ 0.26
NUP188-205ENST00000477069 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
NUP188-205ENST00000477069 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
NUP188-205ENST00000477069 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms