RNA–Protein interactions for RNA: ENST00000476683.1

SCN5A-212, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 3

Gene SCN5A, Length 774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-212ENST00000476683 KIAA0586Q9BVV6 1533 aa27.39■■□□□ 1.98
SCN5A-212ENST00000476683 ERCC6L2Q5T890 1561 aa27.37■■□□□ 1.97
SCN5A-212ENST00000476683 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
SCN5A-212ENST00000476683 PRG4Q92954 1404 aaPredicted RBP27.33■■□□□ 1.96
SCN5A-212ENST00000476683 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
SCN5A-212ENST00000476683 PRXQ9BXM0 1461 aa27.26■■□□□ 1.95
SCN5A-212ENST00000476683 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
SCN5A-212ENST00000476683 EEA1Q15075 1411 aa27.22■■□□□ 1.95
SCN5A-212ENST00000476683 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
SCN5A-212ENST00000476683 CARMIL2Q6F5E8 1435 aa27.08■■□□□ 1.93
SCN5A-212ENST00000476683 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
SCN5A-212ENST00000476683 UGGT2Q9NYU1 1516 aa27.06■■□□□ 1.92
SCN5A-212ENST00000476683 CTTNBP2Q8WZ74 1663 aa27.03■■□□□ 1.92
SCN5A-212ENST00000476683 DISP1Q96F81 1524 aa27.03■■□□□ 1.92
SCN5A-212ENST00000476683 PTPRGP23470 1445 aa27■■□□□ 1.91
SCN5A-212ENST00000476683 TNIKQ9UKE5 1360 aa27■■□□□ 1.91
SCN5A-212ENST00000476683 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
SCN5A-212ENST00000476683 KIAA0556O60303 1618 aa26.91■■□□□ 1.9
SCN5A-212ENST00000476683 KIF21BO75037 1637 aa26.91■■□□□ 1.9
SCN5A-212ENST00000476683 ADCY10Q96PN6 1610 aa26.9■■□□□ 1.9
SCN5A-212ENST00000476683 GOLGA3Q08378 1498 aa26.89■■□□□ 1.9
SCN5A-212ENST00000476683 TTBK1Q5TCY1 1321 aaPredicted RBP26.89■■□□□ 1.89
SCN5A-212ENST00000476683 NPM1P06748 294 aaKnown RBP eCLIP26.86■■□□□ 1.89
SCN5A-212ENST00000476683 UACAQ9BZF9 1416 aa26.82■■□□□ 1.88
SCN5A-212ENST00000476683 UHRF1BP1LA0JNW5 1464 aa26.81■■□□□ 1.88
SCN5A-212ENST00000476683 MAPKBP1O60336 1514 aa26.76■■□□□ 1.87
SCN5A-212ENST00000476683 ABCC2Q92887 1545 aa26.76■■□□□ 1.87
SCN5A-212ENST00000476683 SAMD9Q5K651 1589 aa26.73■■□□□ 1.87
SCN5A-212ENST00000476683 UBTFP17480 764 aaKnown RBP26.71■■□□□ 1.87
SCN5A-212ENST00000476683 P3H3Q8IVL6 736 aa26.71■■□□□ 1.87
SCN5A-212ENST00000476683 PLB1Q6P1J6 1458 aa26.69■■□□□ 1.86
SCN5A-212ENST00000476683 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
SCN5A-212ENST00000476683 KDM5BQ9UGL1 1544 aa26.68■■□□□ 1.86
SCN5A-212ENST00000476683 ABCC10Q5T3U5 1492 aa26.66■■□□□ 1.86
SCN5A-212ENST00000476683 ABCA8O94911 1581 aa26.66■■□□□ 1.86
SCN5A-212ENST00000476683 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
SCN5A-212ENST00000476683 KIF13AQ9H1H9 1805 aa26.62■■□□□ 1.85
SCN5A-212ENST00000476683 FAM69CQ0P6D2 419 aa26.61■■□□□ 1.85
SCN5A-212ENST00000476683 ASXL2Q76L83 1435 aa26.6■■□□□ 1.85
SCN5A-212ENST00000476683 EFCAB5A4FU69 1503 aa26.59■■□□□ 1.85
SCN5A-212ENST00000476683 DIP2BQ9P265 1576 aa26.58■■□□□ 1.85
SCN5A-212ENST00000476683 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
SCN5A-212ENST00000476683 FHOD3Q2V2M9 1422 aa26.56■■□□□ 1.84
SCN5A-212ENST00000476683 ATP10BO94823 1461 aa26.47■■□□□ 1.83
SCN5A-212ENST00000476683 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
SCN5A-212ENST00000476683 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
SCN5A-212ENST00000476683 GLI2P10070 1586 aa26.46■■□□□ 1.83
SCN5A-212ENST00000476683 WDR7Q9Y4E6 1490 aa26.44■■□□□ 1.82
SCN5A-212ENST00000476683 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
SCN5A-212ENST00000476683 NUP153P49790 1475 aaKnown RBP26.42■■□□□ 1.82
SCN5A-212ENST00000476683 ARID3CA6NKF2 412 aa26.4■■□□□ 1.82
SCN5A-212ENST00000476683 FMN1Q68DA7 1419 aa26.37■■□□□ 1.81
SCN5A-212ENST00000476683 KCNH8Q96L42 1107 aa26.33■■□□□ 1.81
SCN5A-212ENST00000476683 TSPOAP1O95153 1857 aa26.31■■□□□ 1.8
SCN5A-212ENST00000476683 MAP3K4Q9Y6R4 1608 aa26.3■■□□□ 1.8
SCN5A-212ENST00000476683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
SCN5A-212ENST00000476683 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
SCN5A-212ENST00000476683 CLIP1P30622 1438 aa26.28■■□□□ 1.8
SCN5A-212ENST00000476683 PPRC1Q5VV67 1664 aaKnown RBP26.26■■□□□ 1.79
SCN5A-212ENST00000476683 PLEKHD1A6NEE1 506 aa26.23■■□□□ 1.79
SCN5A-212ENST00000476683 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
SCN5A-212ENST00000476683 CFAP43Q8NDM7 1665 aa26.21■■□□□ 1.79
SCN5A-212ENST00000476683 HECW1Q76N89 1606 aa26.21■■□□□ 1.79
SCN5A-212ENST00000476683 LOC105371045A0A1W2PR82 267 aa26.2■■□□□ 1.78
SCN5A-212ENST00000476683 ATP1B4Q9UN42 357 aaPredicted RBP26.2■■□□□ 1.78
SCN5A-212ENST00000476683 TEX14Q8IWB6 1497 aa26.19■■□□□ 1.78
SCN5A-212ENST00000476683 CDK13Q14004 1512 aaKnown RBP26.19■■□□□ 1.78
SCN5A-212ENST00000476683 MAGI3Q5TCQ9 1506 aa26.19■■□□□ 1.78
SCN5A-212ENST00000476683 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
SCN5A-212ENST00000476683 KDM6BO15054 1643 aa26.16■■□□□ 1.78
SCN5A-212ENST00000476683 ABCA9Q8IUA7 1624 aa26.15■■□□□ 1.78
SCN5A-212ENST00000476683 CEP162Q5TB80 1403 aa26.14■■□□□ 1.77
SCN5A-212ENST00000476683 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
SCN5A-212ENST00000476683 PCF11O94913 1555 aaKnown RBP26.1■■□□□ 1.77
SCN5A-212ENST00000476683 COL17A1Q9UMD9 1497 aaPredicted RBP26.1■■□□□ 1.77
SCN5A-212ENST00000476683 FYCO1Q9BQS8 1478 aa26.08■■□□□ 1.77
SCN5A-212ENST00000476683 LRRIQ1Q96JM4 1722 aa26.06■■□□□ 1.76
SCN5A-212ENST00000476683 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
SCN5A-212ENST00000476683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.76
SCN5A-212ENST00000476683 TROQ12816 1431 aaPredicted RBP26.01■■□□□ 1.75
SCN5A-212ENST00000476683 PHLDB1Q86UU1 1377 aa26.01■■□□□ 1.75
SCN5A-212ENST00000476683 TTC37Q6PGP7 1564 aa25.97■■□□□ 1.75
SCN5A-212ENST00000476683 ARAP3Q8WWN8 1544 aa25.97■■□□□ 1.75
SCN5A-212ENST00000476683 NEO1Q92859 1461 aa25.97■■□□□ 1.75
SCN5A-212ENST00000476683 PLCH2O75038 1416 aa25.91■■□□□ 1.74
SCN5A-212ENST00000476683 KIF14Q15058 1648 aa25.91■■□□□ 1.74
SCN5A-212ENST00000476683 FANCAO15360 1455 aa25.89■■□□□ 1.73
SCN5A-212ENST00000476683 AKNAQ7Z591 1439 aa25.86■■□□□ 1.73
SCN5A-212ENST00000476683 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
SCN5A-212ENST00000476683 CFAP74Q9C0B2 1584 aa25.83■■□□□ 1.73
SCN5A-212ENST00000476683 RAPGEF3O95398 923 aa25.83■■□□□ 1.73
SCN5A-212ENST00000476683 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
SCN5A-212ENST00000476683 MYO5CQ9NQX4 1742 aa25.81■■□□□ 1.72
SCN5A-212ENST00000476683 DENND4BO75064 1496 aaPredicted RBP25.78■■□□□ 1.72
SCN5A-212ENST00000476683 MTUS2Q5JR59 1369 aa25.77■■□□□ 1.72
SCN5A-212ENST00000476683 FRMPD1Q5SYB0 1578 aa25.75■■□□□ 1.71
SCN5A-212ENST00000476683 ARHGAP5Q13017 1502 aa25.73■■□□□ 1.71
SCN5A-212ENST00000476683 ADGRL1O94910 1474 aa25.73■■□□□ 1.71
SCN5A-212ENST00000476683 SCAPERQ9BY12 1400 aa25.73■■□□□ 1.71
SCN5A-212ENST00000476683 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms