RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 RAPGEF2Q9Y4G8 1499 aa25.24■■□□□ 1.63
DFFA-203ENST00000476658 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
DFFA-203ENST00000476658 KIAA0586Q9BVV6 1533 aa25.21■■□□□ 1.63
DFFA-203ENST00000476658 JPH4Q96JJ6 628 aa25.19■■□□□ 1.62
DFFA-203ENST00000476658 PRG4Q92954 1404 aaPredicted RBP25.16■■□□□ 1.62
DFFA-203ENST00000476658 EEA1Q15075 1411 aa25.14■■□□□ 1.62
DFFA-203ENST00000476658 CSRNP3Q8WYN3 585 aa25.12■■□□□ 1.61
DFFA-203ENST00000476658 PRXQ9BXM0 1461 aa25.12■■□□□ 1.61
DFFA-203ENST00000476658 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
DFFA-203ENST00000476658 IQGAP2Q13576 1575 aa25.1■■□□□ 1.61
DFFA-203ENST00000476658 CTTNBP2Q8WZ74 1663 aa25.07■■□□□ 1.6
DFFA-203ENST00000476658 CARMIL2Q6F5E8 1435 aa24.96■■□□□ 1.59
DFFA-203ENST00000476658 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
DFFA-203ENST00000476658 KIF21BO75037 1637 aa24.91■■□□□ 1.58
DFFA-203ENST00000476658 DISP1Q96F81 1524 aa24.89■■□□□ 1.57
DFFA-203ENST00000476658 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
DFFA-203ENST00000476658 KIAA0556O60303 1618 aa24.86■■□□□ 1.57
DFFA-203ENST00000476658 TNIKQ9UKE5 1360 aa24.86■■□□□ 1.57
DFFA-203ENST00000476658 PTPRGP23470 1445 aa24.86■■□□□ 1.57
DFFA-203ENST00000476658 GOLGA3Q08378 1498 aa24.82■■□□□ 1.56
DFFA-203ENST00000476658 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
DFFA-203ENST00000476658 TRHP20396 242 aaPredicted RBP24.79■■□□□ 1.56
DFFA-203ENST00000476658 ADCY10Q96PN6 1610 aa24.79■■□□□ 1.56
DFFA-203ENST00000476658 NPM1P06748 294 aaKnown RBP eCLIP24.73■■□□□ 1.55
DFFA-203ENST00000476658 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
DFFA-203ENST00000476658 RANGAP1P46060 587 aaPredicted RBP24.72■■□□□ 1.55
DFFA-203ENST00000476658 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
DFFA-203ENST00000476658 SAMD9Q5K651 1589 aa24.68■■□□□ 1.54
DFFA-203ENST00000476658 UACAQ9BZF9 1416 aa24.68■■□□□ 1.54
DFFA-203ENST00000476658 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
DFFA-203ENST00000476658 UHRF1BP1LA0JNW5 1464 aa24.64■■□□□ 1.54
DFFA-203ENST00000476658 MAPKBP1O60336 1514 aa24.61■■□□□ 1.53
DFFA-203ENST00000476658 PLB1Q6P1J6 1458 aa24.6■■□□□ 1.53
DFFA-203ENST00000476658 EFCAB5A4FU69 1503 aa24.58■■□□□ 1.53
DFFA-203ENST00000476658 ABCA8O94911 1581 aa24.57■■□□□ 1.52
DFFA-203ENST00000476658 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
DFFA-203ENST00000476658 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
DFFA-203ENST00000476658 ZCCHC11Q5TAX3 1644 aaKnown RBP24.53■■□□□ 1.52
DFFA-203ENST00000476658 KDM5BQ9UGL1 1544 aa24.53■■□□□ 1.52
DFFA-203ENST00000476658 ABCC10Q5T3U5 1492 aa24.49■■□□□ 1.51
DFFA-203ENST00000476658 ASXL2Q76L83 1435 aa24.48■■□□□ 1.51
DFFA-203ENST00000476658 DIP2BQ9P265 1576 aa24.48■■□□□ 1.51
DFFA-203ENST00000476658 RAPGEF6Q8TEU7 1601 aa24.47■■□□□ 1.51
DFFA-203ENST00000476658 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
DFFA-203ENST00000476658 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.5
DFFA-203ENST00000476658 ARID3CA6NKF2 412 aa24.42■■□□□ 1.5
DFFA-203ENST00000476658 TSPOAP1O95153 1857 aa24.37■■□□□ 1.49
DFFA-203ENST00000476658 ATP10BO94823 1461 aa24.36■■□□□ 1.49
DFFA-203ENST00000476658 WDR7Q9Y4E6 1490 aa24.36■■□□□ 1.49
DFFA-203ENST00000476658 NUP153P49790 1475 aaKnown RBP24.35■■□□□ 1.49
DFFA-203ENST00000476658 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
DFFA-203ENST00000476658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
DFFA-203ENST00000476658 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
DFFA-203ENST00000476658 EPRSP07814 1512 aaKnown RBP24.33■■□□□ 1.49
DFFA-203ENST00000476658 CLIP1P30622 1438 aa24.32■■□□□ 1.48
DFFA-203ENST00000476658 GLI2P10070 1586 aa24.32■■□□□ 1.48
DFFA-203ENST00000476658 KCNH8Q96L42 1107 aa24.28■■□□□ 1.48
DFFA-203ENST00000476658 ATP1B4Q9UN42 357 aaPredicted RBP24.28■■□□□ 1.48
DFFA-203ENST00000476658 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
DFFA-203ENST00000476658 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
DFFA-203ENST00000476658 MAP3K4Q9Y6R4 1608 aa24.24■■□□□ 1.47
DFFA-203ENST00000476658 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
DFFA-203ENST00000476658 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
DFFA-203ENST00000476658 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
DFFA-203ENST00000476658 CFAP43Q8NDM7 1665 aa24.19■■□□□ 1.46
DFFA-203ENST00000476658 PCF11O94913 1555 aaKnown RBP24.19■■□□□ 1.46
DFFA-203ENST00000476658 PLEKHD1A6NEE1 506 aa24.17■■□□□ 1.46
DFFA-203ENST00000476658 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
DFFA-203ENST00000476658 CASKIN1Q8WXD9 1431 aa24.15■■□□□ 1.46
DFFA-203ENST00000476658 CD109Q6YHK3 1445 aa24.13■■□□□ 1.45
DFFA-203ENST00000476658 TEX14Q8IWB6 1497 aa24.12■■□□□ 1.45
DFFA-203ENST00000476658 KDM6BO15054 1643 aa24.11■■□□□ 1.45
DFFA-203ENST00000476658 ABCA9Q8IUA7 1624 aa24.11■■□□□ 1.45
DFFA-203ENST00000476658 FYCO1Q9BQS8 1478 aa24.1■■□□□ 1.45
DFFA-203ENST00000476658 CDK11AQ9UQ88 783 aaPredicted RBP24.08■■□□□ 1.45
DFFA-203ENST00000476658 CCDC18Q5T9S5 1454 aa24.07■■□□□ 1.44
DFFA-203ENST00000476658 MAGI3Q5TCQ9 1506 aa24.07■■□□□ 1.44
DFFA-203ENST00000476658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.01■■□□□ 1.43
DFFA-203ENST00000476658 TTC37Q6PGP7 1564 aa23.99■■□□□ 1.43
DFFA-203ENST00000476658 TROQ12816 1431 aaPredicted RBP23.99■■□□□ 1.43
DFFA-203ENST00000476658 KIF14Q15058 1648 aa23.98■■□□□ 1.43
DFFA-203ENST00000476658 COL17A1Q9UMD9 1497 aaPredicted RBP23.94■■□□□ 1.42
DFFA-203ENST00000476658 MYO5CQ9NQX4 1742 aa23.92■■□□□ 1.42
DFFA-203ENST00000476658 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
DFFA-203ENST00000476658 NEO1Q92859 1461 aa23.9■■□□□ 1.42
DFFA-203ENST00000476658 CFAP74Q9C0B2 1584 aa23.88■■□□□ 1.41
DFFA-203ENST00000476658 PHLDB1Q86UU1 1377 aa23.88■■□□□ 1.41
DFFA-203ENST00000476658 FANCAO15360 1455 aa23.87■■□□□ 1.41
DFFA-203ENST00000476658 ARAP3Q8WWN8 1544 aa23.86■■□□□ 1.41
DFFA-203ENST00000476658 PLCH2O75038 1416 aa23.85■■□□□ 1.41
DFFA-203ENST00000476658 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
DFFA-203ENST00000476658 AKNAQ7Z591 1439 aa23.82■■□□□ 1.4
DFFA-203ENST00000476658 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
DFFA-203ENST00000476658 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
DFFA-203ENST00000476658 EHBP1L1Q8N3D4 1523 aa23.79■■□□□ 1.4
DFFA-203ENST00000476658 TIAM1Q13009 1591 aa23.78■■□□□ 1.4
DFFA-203ENST00000476658 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
DFFA-203ENST00000476658 CDC42BPAQ5VT25 1732 aa23.78■■□□□ 1.4
DFFA-203ENST00000476658 EFCAB2Q5VUJ9 269 aa23.77■■□□□ 1.4
DFFA-203ENST00000476658 RAPGEF3O95398 923 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms