RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
HLA-DPA1-246ENST00000476642 CSRNP3Q8WYN3 585 aa21.92■■□□□ 1.1
HLA-DPA1-246ENST00000476642 CEP170Q5SW79 1584 aa21.89■■□□□ 1.09
HLA-DPA1-246ENST00000476642 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
HLA-DPA1-246ENST00000476642 ERCC6L2Q5T890 1561 aa21.82■■□□□ 1.08
HLA-DPA1-246ENST00000476642 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
HLA-DPA1-246ENST00000476642 KIAA0586Q9BVV6 1533 aa21.8■■□□□ 1.08
HLA-DPA1-246ENST00000476642 KIF21BO75037 1637 aa21.76■■□□□ 1.07
HLA-DPA1-246ENST00000476642 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
HLA-DPA1-246ENST00000476642 PRG4Q92954 1404 aaPredicted RBP21.75■■□□□ 1.07
HLA-DPA1-246ENST00000476642 JPH4Q96JJ6 628 aa21.75■■□□□ 1.07
HLA-DPA1-246ENST00000476642 CTTNBP2Q8WZ74 1663 aa21.74■■□□□ 1.07
HLA-DPA1-246ENST00000476642 IQGAP2Q13576 1575 aa21.73■■□□□ 1.07
HLA-DPA1-246ENST00000476642 AEBP2Q6ZN18 517 aaPredicted RBP21.69■■□□□ 1.06
HLA-DPA1-246ENST00000476642 NPM1P06748 294 aaKnown RBP eCLIP21.65■■□□□ 1.06
HLA-DPA1-246ENST00000476642 GOLGA3Q08378 1498 aa21.64■■□□□ 1.05
HLA-DPA1-246ENST00000476642 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
HLA-DPA1-246ENST00000476642 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
HLA-DPA1-246ENST00000476642 UBTFP17480 764 aaKnown RBP21.55■■□□□ 1.04
HLA-DPA1-246ENST00000476642 FAM69CQ0P6D2 419 aa21.53■■□□□ 1.04
HLA-DPA1-246ENST00000476642 KIAA0556O60303 1618 aa21.49■■□□□ 1.03
HLA-DPA1-246ENST00000476642 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
HLA-DPA1-246ENST00000476642 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
HLA-DPA1-246ENST00000476642 TTBK1Q5TCY1 1321 aaPredicted RBP21.46■■□□□ 1.03
HLA-DPA1-246ENST00000476642 KIF13AQ9H1H9 1805 aa21.45■■□□□ 1.03
HLA-DPA1-246ENST00000476642 ABCC10Q5T3U5 1492 aa21.45■■□□□ 1.03
HLA-DPA1-246ENST00000476642 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
HLA-DPA1-246ENST00000476642 PTPRGP23470 1445 aa21.44■■□□□ 1.02
HLA-DPA1-246ENST00000476642 MAPKBP1O60336 1514 aa21.44■■□□□ 1.02
HLA-DPA1-246ENST00000476642 EFCAB5A4FU69 1503 aa21.43■■□□□ 1.02
HLA-DPA1-246ENST00000476642 SAMD9Q5K651 1589 aa21.42■■□□□ 1.02
HLA-DPA1-246ENST00000476642 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
HLA-DPA1-246ENST00000476642 DIP2BQ9P265 1576 aa21.36■■□□□ 1.01
HLA-DPA1-246ENST00000476642 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
HLA-DPA1-246ENST00000476642 UACAQ9BZF9 1416 aa21.3■■□□□ 1
HLA-DPA1-246ENST00000476642 P3H3Q8IVL6 736 aa21.3■■□□□ 1
HLA-DPA1-246ENST00000476642 UHRF1BP1LA0JNW5 1464 aa21.29■■□□□ 1
HLA-DPA1-246ENST00000476642 ABCC2Q92887 1545 aa21.27■■□□□ 1
HLA-DPA1-246ENST00000476642 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
HLA-DPA1-246ENST00000476642 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
HLA-DPA1-246ENST00000476642 KDM6BO15054 1643 aa21.24■□□□□ 0.99
HLA-DPA1-246ENST00000476642 ABCA8O94911 1581 aa21.23■□□□□ 0.99
HLA-DPA1-246ENST00000476642 CLIP1P30622 1438 aa21.23■□□□□ 0.99
HLA-DPA1-246ENST00000476642 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
HLA-DPA1-246ENST00000476642 PLB1Q6P1J6 1458 aa21.22■□□□□ 0.99
HLA-DPA1-246ENST00000476642 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
HLA-DPA1-246ENST00000476642 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
HLA-DPA1-246ENST00000476642 LOC105371045A0A1W2PR82 267 aa21.21■□□□□ 0.99
HLA-DPA1-246ENST00000476642 RAPGEF6Q8TEU7 1601 aa21.19■□□□□ 0.98
HLA-DPA1-246ENST00000476642 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
HLA-DPA1-246ENST00000476642 KDM5BQ9UGL1 1544 aa21.17■□□□□ 0.98
HLA-DPA1-246ENST00000476642 ZCCHC11Q5TAX3 1644 aaKnown RBP21.13■□□□□ 0.97
HLA-DPA1-246ENST00000476642 GLI2P10070 1586 aa21.12■□□□□ 0.97
HLA-DPA1-246ENST00000476642 HECW1Q76N89 1606 aa21.09■□□□□ 0.97
HLA-DPA1-246ENST00000476642 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
HLA-DPA1-246ENST00000476642 NUP153P49790 1475 aaKnown RBP21.06■□□□□ 0.96
HLA-DPA1-246ENST00000476642 KDM4FA0A1W2PPD8 638 aa21.05■□□□□ 0.96
HLA-DPA1-246ENST00000476642 ATP10BO94823 1461 aa21.04■□□□□ 0.96
HLA-DPA1-246ENST00000476642 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
HLA-DPA1-246ENST00000476642 TEX14Q8IWB6 1497 aa21.03■□□□□ 0.96
HLA-DPA1-246ENST00000476642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
HLA-DPA1-246ENST00000476642 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
HLA-DPA1-246ENST00000476642 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
HLA-DPA1-246ENST00000476642 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
HLA-DPA1-246ENST00000476642 PPRC1Q5VV67 1664 aaKnown RBP21■□□□□ 0.95
HLA-DPA1-246ENST00000476642 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
HLA-DPA1-246ENST00000476642 WDR7Q9Y4E6 1490 aa21■□□□□ 0.95
HLA-DPA1-246ENST00000476642 KCNH8Q96L42 1107 aa20.98■□□□□ 0.95
HLA-DPA1-246ENST00000476642 CCDC18Q5T9S5 1454 aa20.98■□□□□ 0.95
HLA-DPA1-246ENST00000476642 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
HLA-DPA1-246ENST00000476642 MAP3K4Q9Y6R4 1608 aa20.96■□□□□ 0.95
HLA-DPA1-246ENST00000476642 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
HLA-DPA1-246ENST00000476642 PLEKHD1A6NEE1 506 aa20.95■□□□□ 0.94
HLA-DPA1-246ENST00000476642 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
HLA-DPA1-246ENST00000476642 COL17A1Q9UMD9 1497 aaPredicted RBP20.92■□□□□ 0.94
HLA-DPA1-246ENST00000476642 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
HLA-DPA1-246ENST00000476642 CD109Q6YHK3 1445 aa20.91■□□□□ 0.94
HLA-DPA1-246ENST00000476642 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
HLA-DPA1-246ENST00000476642 ADGRL1O94910 1474 aa20.88■□□□□ 0.93
HLA-DPA1-246ENST00000476642 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
HLA-DPA1-246ENST00000476642 MAGI3Q5TCQ9 1506 aa20.84■□□□□ 0.93
HLA-DPA1-246ENST00000476642 TROQ12816 1431 aaPredicted RBP20.82■□□□□ 0.92
HLA-DPA1-246ENST00000476642 ABCA9Q8IUA7 1624 aa20.82■□□□□ 0.92
HLA-DPA1-246ENST00000476642 KIF14Q15058 1648 aa20.79■□□□□ 0.92
HLA-DPA1-246ENST00000476642 APLP2Q06481 763 aa20.78■□□□□ 0.92
HLA-DPA1-246ENST00000476642 MAP3K1Q13233 1512 aa20.78■□□□□ 0.92
HLA-DPA1-246ENST00000476642 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
HLA-DPA1-246ENST00000476642 TIAM1Q13009 1591 aa20.75■□□□□ 0.91
HLA-DPA1-246ENST00000476642 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
HLA-DPA1-246ENST00000476642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
HLA-DPA1-246ENST00000476642 PHLDB1Q86UU1 1377 aa20.7■□□□□ 0.9
HLA-DPA1-246ENST00000476642 MYO5CQ9NQX4 1742 aa20.7■□□□□ 0.9
HLA-DPA1-246ENST00000476642 TTC37Q6PGP7 1564 aa20.69■□□□□ 0.9
HLA-DPA1-246ENST00000476642 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
HLA-DPA1-246ENST00000476642 ARAP3Q8WWN8 1544 aa20.68■□□□□ 0.9
HLA-DPA1-246ENST00000476642 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
HLA-DPA1-246ENST00000476642 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
HLA-DPA1-246ENST00000476642 NEO1Q92859 1461 aa20.64■□□□□ 0.89
HLA-DPA1-246ENST00000476642 PLCH2O75038 1416 aa20.64■□□□□ 0.89
HLA-DPA1-246ENST00000476642 RAPGEF3O95398 923 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms