RNA–Protein interactions for RNA: ENST00000476589.1

NLGN3-204, Transcript of neuroligin 3, humanhuman

TSL 1 (best)

Gene NLGN3, Length 3,153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-204ENST00000476589 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
NLGN3-204ENST00000476589 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
NLGN3-204ENST00000476589 MSH5O43196 834 aa19.6■□□□□ 0.73
NLGN3-204ENST00000476589 SETD5Q9C0A6 1442 aa19.6■□□□□ 0.73
NLGN3-204ENST00000476589 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
NLGN3-204ENST00000476589 CCER2I3L3R5 266 aa19.58■□□□□ 0.72
NLGN3-204ENST00000476589 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
NLGN3-204ENST00000476589 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
NLGN3-204ENST00000476589 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
NLGN3-204ENST00000476589 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.72
NLGN3-204ENST00000476589 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.71
NLGN3-204ENST00000476589 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
NLGN3-204ENST00000476589 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
NLGN3-204ENST00000476589 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
NLGN3-204ENST00000476589 TONSLQ96HA7 1378 aa19.43■□□□□ 0.7
NLGN3-204ENST00000476589 FANCIQ9NVI1 1328 aa19.42■□□□□ 0.7
NLGN3-204ENST00000476589 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
NLGN3-204ENST00000476589 CUX1P39880 1505 aa19.39■□□□□ 0.69
NLGN3-204ENST00000476589 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
NLGN3-204ENST00000476589 LRRC9Q6ZRR7 1453 aa19.37■□□□□ 0.69
NLGN3-204ENST00000476589 B4GALNT3Q6L9W6 998 aa19.28■□□□□ 0.68
NLGN3-204ENST00000476589 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
NLGN3-204ENST00000476589 DEKP35659 375 aaKnown RBP19.27■□□□□ 0.67
NLGN3-204ENST00000476589 IGF1RP08069 1367 aa19.26■□□□□ 0.67
NLGN3-204ENST00000476589 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
NLGN3-204ENST00000476589 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
NLGN3-204ENST00000476589 NBR1Q14596 966 aa19.24■□□□□ 0.67
NLGN3-204ENST00000476589 FAM9BQ8IZU0 186 aa19.24■□□□□ 0.67
NLGN3-204ENST00000476589 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
NLGN3-204ENST00000476589 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
NLGN3-204ENST00000476589 CCDC184Q52MB2 194 aa19.19■□□□□ 0.66
NLGN3-204ENST00000476589 HSPA5P11021 654 aaKnown RBP19.18■□□□□ 0.66
NLGN3-204ENST00000476589 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
NLGN3-204ENST00000476589 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
NLGN3-204ENST00000476589 PCF11O94913 1555 aaKnown RBP19.17■□□□□ 0.66
NLGN3-204ENST00000476589 WASHC2AQ641Q2 1341 aa19.17■□□□□ 0.66
NLGN3-204ENST00000476589 ERICH6BQ5W0A0 696 aa19.16■□□□□ 0.66
NLGN3-204ENST00000476589 MRS2Q9HD23 443 aa19.15■□□□□ 0.66
NLGN3-204ENST00000476589 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.66
NLGN3-204ENST00000476589 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.66
NLGN3-204ENST00000476589 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
NLGN3-204ENST00000476589 EIF4G2P78344 907 aaKnown RBP eCLIP19.1■□□□□ 0.65
NLGN3-204ENST00000476589 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
NLGN3-204ENST00000476589 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
NLGN3-204ENST00000476589 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
NLGN3-204ENST00000476589 CFAP43Q8NDM7 1665 aa19.09■□□□□ 0.65
NLGN3-204ENST00000476589 CFTRP13569 1480 aa19.08■□□□□ 0.65
NLGN3-204ENST00000476589 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.64
NLGN3-204ENST00000476589 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
NLGN3-204ENST00000476589 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
NLGN3-204ENST00000476589 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
NLGN3-204ENST00000476589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.04■□□□□ 0.64
NLGN3-204ENST00000476589 PRKRIP1Q9H875 184 aaPredicted RBP19.04■□□□□ 0.64
NLGN3-204ENST00000476589 HFM1A2PYH4 1435 aa19.04■□□□□ 0.64
NLGN3-204ENST00000476589 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
NLGN3-204ENST00000476589 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.64
NLGN3-204ENST00000476589 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.64
NLGN3-204ENST00000476589 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.64
NLGN3-204ENST00000476589 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.64
NLGN3-204ENST00000476589 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
NLGN3-204ENST00000476589 FYCO1Q9BQS8 1478 aa19.02■□□□□ 0.63
NLGN3-204ENST00000476589 ANP32AP39687 249 aaKnown RBP19.01■□□□□ 0.63
NLGN3-204ENST00000476589 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
NLGN3-204ENST00000476589 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
NLGN3-204ENST00000476589 NAIPQ13075 1403 aa19■□□□□ 0.63
NLGN3-204ENST00000476589 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
NLGN3-204ENST00000476589 POLR3GLQ9BT43 218 aa18.99■□□□□ 0.63
NLGN3-204ENST00000476589 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
NLGN3-204ENST00000476589 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
NLGN3-204ENST00000476589 FMN1Q68DA7 1419 aa18.98■□□□□ 0.63
NLGN3-204ENST00000476589 FOXD1Q16676 465 aa18.97■□□□□ 0.63
NLGN3-204ENST00000476589 L3MBTL2Q969R5 705 aa18.95■□□□□ 0.62
NLGN3-204ENST00000476589 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
NLGN3-204ENST00000476589 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
NLGN3-204ENST00000476589 CCDC7Q96M83 1385 aa18.94■□□□□ 0.62
NLGN3-204ENST00000476589 AKNAQ7Z591 1439 aa18.93■□□□□ 0.62
NLGN3-204ENST00000476589 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
NLGN3-204ENST00000476589 IPO9Q96P70 1041 aaKnown RBP18.92■□□□□ 0.62
NLGN3-204ENST00000476589 NCOA2Q15596 1464 aa18.91■□□□□ 0.62
NLGN3-204ENST00000476589 NPM2Q86SE8 214 aaKnown RBP18.9■□□□□ 0.62
NLGN3-204ENST00000476589 MYOM3Q5VTT5 1437 aa18.89■□□□□ 0.61
NLGN3-204ENST00000476589 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
NLGN3-204ENST00000476589 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
NLGN3-204ENST00000476589 MPHOSPH9Q99550 1183 aa18.87■□□□□ 0.61
NLGN3-204ENST00000476589 ANO8Q9HCE9 1232 aaPredicted RBP18.87■□□□□ 0.61
NLGN3-204ENST00000476589 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
NLGN3-204ENST00000476589 EFCAB5A4FU69 1503 aa18.86■□□□□ 0.61
NLGN3-204ENST00000476589 NCOA1Q15788 1441 aa18.86■□□□□ 0.61
NLGN3-204ENST00000476589 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
NLGN3-204ENST00000476589 NUDCQ9Y266 331 aa18.85■□□□□ 0.61
NLGN3-204ENST00000476589 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
NLGN3-204ENST00000476589 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
NLGN3-204ENST00000476589 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
NLGN3-204ENST00000476589 SMG6Q86US8 1419 aaKnown RBP18.81■□□□□ 0.6
NLGN3-204ENST00000476589 SNAPC4Q5SXM2 1469 aa18.8■□□□□ 0.6
NLGN3-204ENST00000476589 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
NLGN3-204ENST00000476589 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
NLGN3-204ENST00000476589 SALL2Q9Y467 1007 aaPredicted RBP18.77■□□□□ 0.6
NLGN3-204ENST00000476589 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.6
NLGN3-204ENST00000476589 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 424.2 ms