RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 MAPKBP1O60336 1514 aa11.97□□□□□ -0.49
MACF1-216ENST00000476350 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
MACF1-216ENST00000476350 RAB3GAP2Q9H2M9 1393 aa11.96□□□□□ -0.49
MACF1-216ENST00000476350 PLPPR3Q6T4P5 718 aa11.96□□□□□ -0.49
MACF1-216ENST00000476350 TIAM1Q13009 1591 aa11.94□□□□□ -0.5
MACF1-216ENST00000476350 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
MACF1-216ENST00000476350 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
MACF1-216ENST00000476350 SETD5Q9C0A6 1442 aa11.92□□□□□ -0.5
MACF1-216ENST00000476350 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
MACF1-216ENST00000476350 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
MACF1-216ENST00000476350 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
MACF1-216ENST00000476350 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
MACF1-216ENST00000476350 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
MACF1-216ENST00000476350 MAP3K1Q13233 1512 aa11.89□□□□□ -0.51
MACF1-216ENST00000476350 FKBP8Q14318 412 aa11.88□□□□□ -0.51
MACF1-216ENST00000476350 CFAP43Q8NDM7 1665 aa11.88□□□□□ -0.51
MACF1-216ENST00000476350 FAM50AQ14320 339 aaKnown RBP11.88□□□□□ -0.51
MACF1-216ENST00000476350 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
MACF1-216ENST00000476350 DDX10Q13206 875 aaKnown RBP11.87□□□□□ -0.51
MACF1-216ENST00000476350 NCAPD3P42695 1498 aa11.86□□□□□ -0.51
MACF1-216ENST00000476350 CFTRP13569 1480 aa11.86□□□□□ -0.51
MACF1-216ENST00000476350 NEFLP07196 543 aa11.85□□□□□ -0.51
MACF1-216ENST00000476350 SIN3AQ96ST3 1273 aa11.84□□□□□ -0.51
MACF1-216ENST00000476350 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
MACF1-216ENST00000476350 PHLDB1Q86UU1 1377 aa11.84□□□□□ -0.51
MACF1-216ENST00000476350 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
MACF1-216ENST00000476350 IGF1RP08069 1367 aa11.81□□□□□ -0.52
MACF1-216ENST00000476350 ANP32CO43423 234 aa11.81□□□□□ -0.52
MACF1-216ENST00000476350 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
MACF1-216ENST00000476350 FHAD1B1AJZ9 1412 aa11.8□□□□□ -0.52
MACF1-216ENST00000476350 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
MACF1-216ENST00000476350 CCER2I3L3R5 266 aa11.78□□□□□ -0.52
MACF1-216ENST00000476350 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
MACF1-216ENST00000476350 C14orf37Q86TY3 774 aa11.77□□□□□ -0.52
MACF1-216ENST00000476350 TIMELESSQ9UNS1 1208 aa11.77□□□□□ -0.53
MACF1-216ENST00000476350 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.53
MACF1-216ENST00000476350 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
MACF1-216ENST00000476350 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
MACF1-216ENST00000476350 TRIM52Q96A61 297 aa11.76□□□□□ -0.53
MACF1-216ENST00000476350 FOXD1Q16676 465 aa11.75□□□□□ -0.53
MACF1-216ENST00000476350 FYCO1Q9BQS8 1478 aa11.75□□□□□ -0.53
MACF1-216ENST00000476350 PLEKHD1A6NEE1 506 aa11.74□□□□□ -0.53
MACF1-216ENST00000476350 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
MACF1-216ENST00000476350 TONSLQ96HA7 1378 aa11.73□□□□□ -0.53
MACF1-216ENST00000476350 FHOD3Q2V2M9 1422 aa11.73□□□□□ -0.53
MACF1-216ENST00000476350 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
MACF1-216ENST00000476350 EFCAB5A4FU69 1503 aa11.71□□□□□ -0.53
MACF1-216ENST00000476350 TSPY4P0CV99 314 aa11.71□□□□□ -0.53
MACF1-216ENST00000476350 TSPY10P0CW01 314 aa11.71□□□□□ -0.53
MACF1-216ENST00000476350 NEFMP07197 916 aa11.71□□□□□ -0.54
MACF1-216ENST00000476350 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.54
MACF1-216ENST00000476350 CTTNBP2Q8WZ74 1663 aa11.71□□□□□ -0.54
MACF1-216ENST00000476350 CASKIN1Q8WXD9 1431 aa11.7□□□□□ -0.54
MACF1-216ENST00000476350 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
MACF1-216ENST00000476350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.69□□□□□ -0.54
MACF1-216ENST00000476350 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
MACF1-216ENST00000476350 AQRO60306 1485 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■■□ 20.7
MACF1-216ENST00000476350 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
MACF1-216ENST00000476350 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
MACF1-216ENST00000476350 CADPSQ9ULU8 1353 aa11.67□□□□□ -0.54
MACF1-216ENST00000476350 FGD6Q6ZV73 1430 aa11.67□□□□□ -0.54
MACF1-216ENST00000476350 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
MACF1-216ENST00000476350 CUL7Q14999 1698 aa11.66□□□□□ -0.54
MACF1-216ENST00000476350 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
MACF1-216ENST00000476350 UACAQ9BZF9 1416 aa11.64□□□□□ -0.55
MACF1-216ENST00000476350 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
MACF1-216ENST00000476350 POLR3GLQ9BT43 218 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 RAD54L2Q9Y4B4 1467 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
MACF1-216ENST00000476350 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 FMN1Q68DA7 1419 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 NPM2Q86SE8 214 aaKnown RBP11.62□□□□□ -0.55
MACF1-216ENST00000476350 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
MACF1-216ENST00000476350 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
MACF1-216ENST00000476350 SNAPC4Q5SXM2 1469 aa11.61□□□□□ -0.55
MACF1-216ENST00000476350 CARMIL2Q6F5E8 1435 aa11.61□□□□□ -0.55
MACF1-216ENST00000476350 IRX6P78412 446 aaPredicted RBP11.61□□□□□ -0.55
MACF1-216ENST00000476350 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
MACF1-216ENST00000476350 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
MACF1-216ENST00000476350 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
MACF1-216ENST00000476350 PTPRKQ15262 1439 aa11.6□□□□□ -0.55
MACF1-216ENST00000476350 NCOA2Q15596 1464 aa11.59□□□□□ -0.55
MACF1-216ENST00000476350 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
MACF1-216ENST00000476350 CYB5RLQ6IPT4 315 aa11.58□□□□□ -0.56
MACF1-216ENST00000476350 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
MACF1-216ENST00000476350 MSH5O43196 834 aa11.57□□□□□ -0.56
MACF1-216ENST00000476350 KDM5BQ9UGL1 1544 aa11.57□□□□□ -0.56
MACF1-216ENST00000476350 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
MACF1-216ENST00000476350 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
MACF1-216ENST00000476350 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
MACF1-216ENST00000476350 NAIPQ13075 1403 aa11.56□□□□□ -0.56
MACF1-216ENST00000476350 GCC2Q8IWJ2 1684 aa11.56□□□□□ -0.56
MACF1-216ENST00000476350 HECW1Q76N89 1606 aa11.55□□□□□ -0.56
MACF1-216ENST00000476350 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
MACF1-216ENST00000476350 THOC2Q8NI27 1593 aaKnown RBP11.55□□□□□ -0.56
MACF1-216ENST00000476350 FANCIQ9NVI1 1328 aa11.55□□□□□ -0.56
MACF1-216ENST00000476350 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
MACF1-216ENST00000476350 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms