RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 JPH4Q96JJ6 628 aa36.13■■■■□ 3.37
LIME1-204ENST00000476183 PRG4Q92954 1404 aaPredicted RBP36.08■■■■□ 3.37
LIME1-204ENST00000476183 KIAA0586Q9BVV6 1533 aa36.07■■■■□ 3.36
LIME1-204ENST00000476183 RAPGEF2Q9Y4G8 1499 aa35.93■■■■□ 3.34
LIME1-204ENST00000476183 TRHP20396 242 aaPredicted RBP35.83■■■■□ 3.33
LIME1-204ENST00000476183 IQGAP2Q13576 1575 aa35.81■■■■□ 3.32
LIME1-204ENST00000476183 PRXQ9BXM0 1461 aa35.76■■■■□ 3.32
LIME1-204ENST00000476183 CARMIL2Q6F5E8 1435 aa35.66■■■■□ 3.3
LIME1-204ENST00000476183 DISP1Q96F81 1524 aa35.63■■■■□ 3.29
LIME1-204ENST00000476183 UGGT2Q9NYU1 1516 aa35.62■■■■□ 3.29
LIME1-204ENST00000476183 CSRNP3Q8WYN3 585 aa35.62■■■■□ 3.29
LIME1-204ENST00000476183 CTTNBP2Q8WZ74 1663 aa35.61■■■■□ 3.29
LIME1-204ENST00000476183 ADCY10Q96PN6 1610 aa35.61■■■■□ 3.29
LIME1-204ENST00000476183 PTPRGP23470 1445 aa35.6■■■■□ 3.29
LIME1-204ENST00000476183 CHIC1Q5VXU3 224 aa35.6■■■■□ 3.29
LIME1-204ENST00000476183 TNIKQ9UKE5 1360 aa35.59■■■■□ 3.29
LIME1-204ENST00000476183 EEA1Q15075 1411 aa35.57■■■■□ 3.28
LIME1-204ENST00000476183 TTBK1Q5TCY1 1321 aaPredicted RBP35.55■■■■□ 3.28
LIME1-204ENST00000476183 KIAA0556O60303 1618 aa35.5■■■■□ 3.27
LIME1-204ENST00000476183 FAM9AQ8IZU1 332 aaPredicted RBP35.47■■■■□ 3.27
LIME1-204ENST00000476183 NPM1P06748 294 aaKnown RBP eCLIP35.45■■■■□ 3.27
LIME1-204ENST00000476183 MAPKBP1O60336 1514 aa35.41■■■■□ 3.26
LIME1-204ENST00000476183 KIF13AQ9H1H9 1805 aa35.36■■■■□ 3.25
LIME1-204ENST00000476183 UACAQ9BZF9 1416 aa35.36■■■■□ 3.25
LIME1-204ENST00000476183 UHRF1BP1LA0JNW5 1464 aa35.35■■■■□ 3.25
LIME1-204ENST00000476183 GOLGA3Q08378 1498 aa35.35■■■■□ 3.25
LIME1-204ENST00000476183 ABCC2Q92887 1545 aa35.33■■■■□ 3.25
LIME1-204ENST00000476183 ABCC10Q5T3U5 1492 aa35.29■■■■□ 3.24
LIME1-204ENST00000476183 KIF21BO75037 1637 aa35.27■■■■□ 3.24
LIME1-204ENST00000476183 DIP2BQ9P265 1576 aa35.24■■■■□ 3.23
LIME1-204ENST00000476183 FAM69CQ0P6D2 419 aa35.23■■■■□ 3.23
LIME1-204ENST00000476183 PLB1Q6P1J6 1458 aa35.2■■■■□ 3.23
LIME1-204ENST00000476183 KDM5BQ9UGL1 1544 aa35.18■■■■□ 3.22
LIME1-204ENST00000476183 P3H3Q8IVL6 736 aa35.16■■■■□ 3.22
LIME1-204ENST00000476183 SAMD9Q5K651 1589 aa35.16■■■■□ 3.22
LIME1-204ENST00000476183 ASXL2Q76L83 1435 aa35.15■■■■□ 3.22
LIME1-204ENST00000476183 ABCA8O94911 1581 aa35.14■■■■□ 3.22
LIME1-204ENST00000476183 ZCCHC11Q5TAX3 1644 aaKnown RBP35.12■■■■□ 3.21
LIME1-204ENST00000476183 RANGAP1P46060 587 aaPredicted RBP35.07■■■■□ 3.2
LIME1-204ENST00000476183 EHMT2Q96KQ7 1210 aa35.06■■■■□ 3.2
LIME1-204ENST00000476183 GLI2P10070 1586 aa34.97■■■■□ 3.19
LIME1-204ENST00000476183 TSPOAP1O95153 1857 aa34.97■■■■□ 3.19
LIME1-204ENST00000476183 UBTFP17480 764 aaKnown RBP34.96■■■■□ 3.19
LIME1-204ENST00000476183 FHOD3Q2V2M9 1422 aa34.96■■■■□ 3.19
LIME1-204ENST00000476183 EPRSP07814 1512 aaKnown RBP34.95■■■■□ 3.19
LIME1-204ENST00000476183 EFCAB5A4FU69 1503 aa34.91■■■■□ 3.18
LIME1-204ENST00000476183 WDR7Q9Y4E6 1490 aa34.9■■■■□ 3.18
LIME1-204ENST00000476183 RAPGEF6Q8TEU7 1601 aa34.88■■■■□ 3.17
LIME1-204ENST00000476183 ARID3CA6NKF2 412 aa34.87■■■■□ 3.17
LIME1-204ENST00000476183 ATP10BO94823 1461 aa34.85■■■■□ 3.17
LIME1-204ENST00000476183 PPRC1Q5VV67 1664 aaKnown RBP34.84■■■■□ 3.17
LIME1-204ENST00000476183 MAP3K4Q9Y6R4 1608 aa34.81■■■■□ 3.16
LIME1-204ENST00000476183 NUP153P49790 1475 aaKnown RBP34.78■■■■□ 3.16
LIME1-204ENST00000476183 KCNH8Q96L42 1107 aa34.75■■■■□ 3.15
LIME1-204ENST00000476183 ARHGAP35Q9NRY4 1499 aa34.74■■■■□ 3.15
LIME1-204ENST00000476183 KDM6BO15054 1643 aa34.73■■■■□ 3.15
LIME1-204ENST00000476183 CFAP43Q8NDM7 1665 aa34.63■■■■□ 3.13
LIME1-204ENST00000476183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.63■■■■□ 3.13
LIME1-204ENST00000476183 HNRNPUL2Q1KMD3 747 aaKnown RBP34.63■■■■□ 3.13
LIME1-204ENST00000476183 TEX14Q8IWB6 1497 aa34.62■■■■□ 3.13
LIME1-204ENST00000476183 CD109Q6YHK3 1445 aa34.62■■■■□ 3.13
LIME1-204ENST00000476183 FMN1Q68DA7 1419 aa34.57■■■■□ 3.13
LIME1-204ENST00000476183 MAGI3Q5TCQ9 1506 aa34.57■■■■□ 3.12
LIME1-204ENST00000476183 COL17A1Q9UMD9 1497 aaPredicted RBP34.57■■■■□ 3.12
LIME1-204ENST00000476183 ABCA9Q8IUA7 1624 aa34.52■■■■□ 3.12
LIME1-204ENST00000476183 CDK13Q14004 1512 aaKnown RBP34.5■■■■□ 3.11
LIME1-204ENST00000476183 PLEKHD1A6NEE1 506 aa34.47■■■■□ 3.11
LIME1-204ENST00000476183 HECW1Q76N89 1606 aa34.46■■■■□ 3.11
LIME1-204ENST00000476183 ATP1B4Q9UN42 357 aaPredicted RBP34.44■■■■□ 3.1
LIME1-204ENST00000476183 CLIP1P30622 1438 aa34.39■■■■□ 3.1
LIME1-204ENST00000476183 LRRIQ1Q96JM4 1722 aa34.35■■■■□ 3.09
LIME1-204ENST00000476183 PCF11O94913 1555 aaKnown RBP34.32■■■■□ 3.09
LIME1-204ENST00000476183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.32■■■■□ 3.08
LIME1-204ENST00000476183 CASKIN1Q8WXD9 1431 aa34.3■■■■□ 3.08
LIME1-204ENST00000476183 TTC37Q6PGP7 1564 aa34.28■■■■□ 3.08
LIME1-204ENST00000476183 ARAP3Q8WWN8 1544 aa34.28■■■■□ 3.08
LIME1-204ENST00000476183 NEO1Q92859 1461 aa34.25■■■■□ 3.07
LIME1-204ENST00000476183 PHLDB1Q86UU1 1377 aa34.23■■■■□ 3.07
LIME1-204ENST00000476183 AEBP2Q6ZN18 517 aaPredicted RBP34.22■■■■□ 3.07
LIME1-204ENST00000476183 CDK11AQ9UQ88 783 aaPredicted RBP34.22■■■■□ 3.07
LIME1-204ENST00000476183 TROQ12816 1431 aaPredicted RBP34.19■■■■□ 3.06
LIME1-204ENST00000476183 FYCO1Q9BQS8 1478 aa34.19■■■■□ 3.06
LIME1-204ENST00000476183 CEP162Q5TB80 1403 aa34.18■■■■□ 3.06
LIME1-204ENST00000476183 LOC105371045A0A1W2PR82 267 aa34.17■■■■□ 3.06
LIME1-204ENST00000476183 KIF14Q15058 1648 aa34.17■■■■□ 3.06
LIME1-204ENST00000476183 CCDC18Q5T9S5 1454 aa34.17■■■■□ 3.06
LIME1-204ENST00000476183 KDM4FA0A1W2PPD8 638 aa34.14■■■■□ 3.06
LIME1-204ENST00000476183 FANCAO15360 1455 aa34.14■■■■□ 3.06
LIME1-204ENST00000476183 RAPGEF3O95398 923 aa34.12■■■■□ 3.05
LIME1-204ENST00000476183 AKNAQ7Z591 1439 aa34.11■■■■□ 3.05
LIME1-204ENST00000476183 PLCH2O75038 1416 aa34.1■■■■□ 3.05
LIME1-204ENST00000476183 FRMPD1Q5SYB0 1578 aa34.08■■■■□ 3.05
LIME1-204ENST00000476183 CFAP74Q9C0B2 1584 aa34.08■■■■□ 3.05
LIME1-204ENST00000476183 MYO5CQ9NQX4 1742 aa34.04■■■■□ 3.04
LIME1-204ENST00000476183 DENND4BO75064 1496 aaPredicted RBP34.01■■■■□ 3.04
LIME1-204ENST00000476183 ADGRL1O94910 1474 aa34.01■■■■□ 3.03
LIME1-204ENST00000476183 RICTORQ6R327 1708 aa33.99■■■■□ 3.03
LIME1-204ENST00000476183 EFCAB2Q5VUJ9 269 aa33.94■■■■□ 3.02
LIME1-204ENST00000476183 ARHGAP5Q13017 1502 aa33.91■■■■□ 3.02
LIME1-204ENST00000476183 SCAPERQ9BY12 1400 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 199.1 ms