RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 IGF1RP08069 1367 aa23.06■■□□□ 1.28
SOD1-204ENST00000476106 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
SOD1-204ENST00000476106 KIF13AQ9H1H9 1805 aa22.98■■□□□ 1.27
SOD1-204ENST00000476106 FAM9AQ8IZU1 332 aaPredicted RBP22.97■■□□□ 1.27
SOD1-204ENST00000476106 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
SOD1-204ENST00000476106 NUP160Q12769 1436 aa22.96■■□□□ 1.27
SOD1-204ENST00000476106 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
SOD1-204ENST00000476106 CTTNBP2Q8WZ74 1663 aa22.92■■□□□ 1.26
SOD1-204ENST00000476106 RAPGEF2Q9Y4G8 1499 aa22.91■■□□□ 1.26
SOD1-204ENST00000476106 EEA1Q15075 1411 aa22.9■■□□□ 1.26
SOD1-204ENST00000476106 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
SOD1-204ENST00000476106 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
SOD1-204ENST00000476106 NPM1P06748 294 aaKnown RBP eCLIP22.85■■□□□ 1.25
SOD1-204ENST00000476106 PRXQ9BXM0 1461 aa22.83■■□□□ 1.25
SOD1-204ENST00000476106 CSRNP3Q8WYN3 585 aa22.82■■□□□ 1.24
SOD1-204ENST00000476106 KDM6BO15054 1643 aa22.82■■□□□ 1.24
SOD1-204ENST00000476106 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
SOD1-204ENST00000476106 KIF21BO75037 1637 aa22.79■■□□□ 1.24
SOD1-204ENST00000476106 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
SOD1-204ENST00000476106 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
SOD1-204ENST00000476106 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
SOD1-204ENST00000476106 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
SOD1-204ENST00000476106 FBXO41Q8TF61 875 aa22.7■■□□□ 1.22
SOD1-204ENST00000476106 DIP2BQ9P265 1576 aa22.69■■□□□ 1.22
SOD1-204ENST00000476106 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
SOD1-204ENST00000476106 HECW2Q9P2P5 1572 aa22.64■■□□□ 1.22
SOD1-204ENST00000476106 ADGRL1O94910 1474 aa22.64■■□□□ 1.21
SOD1-204ENST00000476106 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
SOD1-204ENST00000476106 UGGT2Q9NYU1 1516 aa22.6■■□□□ 1.21
SOD1-204ENST00000476106 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
SOD1-204ENST00000476106 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
SOD1-204ENST00000476106 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
SOD1-204ENST00000476106 DISP1Q96F81 1524 aa22.55■■□□□ 1.2
SOD1-204ENST00000476106 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
SOD1-204ENST00000476106 UBTFP17480 764 aaKnown RBP22.53■■□□□ 1.2
SOD1-204ENST00000476106 TSPOAP1O95153 1857 aa22.53■■□□□ 1.2
SOD1-204ENST00000476106 SAMD9Q5K651 1589 aa22.48■■□□□ 1.19
SOD1-204ENST00000476106 ADCY10Q96PN6 1610 aa22.47■■□□□ 1.19
SOD1-204ENST00000476106 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
SOD1-204ENST00000476106 P3H3Q8IVL6 736 aa22.42■■□□□ 1.18
SOD1-204ENST00000476106 PTPRGP23470 1445 aa22.41■■□□□ 1.18
SOD1-204ENST00000476106 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
SOD1-204ENST00000476106 LMTK3Q96Q04 1460 aa22.37■■□□□ 1.17
SOD1-204ENST00000476106 FHOD3Q2V2M9 1422 aa22.36■■□□□ 1.17
SOD1-204ENST00000476106 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
SOD1-204ENST00000476106 PLB1Q6P1J6 1458 aa22.3■■□□□ 1.16
SOD1-204ENST00000476106 GLI2P10070 1586 aa22.29■■□□□ 1.16
SOD1-204ENST00000476106 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
SOD1-204ENST00000476106 UACAQ9BZF9 1416 aa22.28■■□□□ 1.16
SOD1-204ENST00000476106 ABCA8O94911 1581 aa22.28■■□□□ 1.16
SOD1-204ENST00000476106 COL17A1Q9UMD9 1497 aaPredicted RBP22.28■■□□□ 1.16
SOD1-204ENST00000476106 ZCCHC11Q5TAX3 1644 aaKnown RBP22.28■■□□□ 1.16
SOD1-204ENST00000476106 RAPGEF6Q8TEU7 1601 aa22.28■■□□□ 1.16
SOD1-204ENST00000476106 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
SOD1-204ENST00000476106 PPRC1Q5VV67 1664 aaKnown RBP22.25■■□□□ 1.15
SOD1-204ENST00000476106 SOCS7O14512 581 aa22.24■■□□□ 1.15
SOD1-204ENST00000476106 ASXL2Q76L83 1435 aa22.23■■□□□ 1.15
SOD1-204ENST00000476106 UHRF1BP1LA0JNW5 1464 aa22.22■■□□□ 1.15
SOD1-204ENST00000476106 CLIP1P30622 1438 aa22.22■■□□□ 1.15
SOD1-204ENST00000476106 TEX14Q8IWB6 1497 aa22.2■■□□□ 1.14
SOD1-204ENST00000476106 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
SOD1-204ENST00000476106 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
SOD1-204ENST00000476106 PCF11O94913 1555 aaKnown RBP22.15■■□□□ 1.14
SOD1-204ENST00000476106 KDM5BQ9UGL1 1544 aa22.14■■□□□ 1.13
SOD1-204ENST00000476106 LRRIQ1Q96JM4 1722 aa22.14■■□□□ 1.13
SOD1-204ENST00000476106 HECW1Q76N89 1606 aa22.13■■□□□ 1.13
SOD1-204ENST00000476106 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
SOD1-204ENST00000476106 NUP153P49790 1475 aaKnown RBP22.1■■□□□ 1.13
SOD1-204ENST00000476106 EPRSP07814 1512 aaKnown RBP22.08■■□□□ 1.13
SOD1-204ENST00000476106 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
SOD1-204ENST00000476106 ATP1B4Q9UN42 357 aaPredicted RBP22.08■■□□□ 1.13
SOD1-204ENST00000476106 MAP3K4Q9Y6R4 1608 aa22.07■■□□□ 1.12
SOD1-204ENST00000476106 CDK13Q14004 1512 aaKnown RBP22.06■■□□□ 1.12
SOD1-204ENST00000476106 DISP3Q9P2K9 1392 aa22.05■■□□□ 1.12
SOD1-204ENST00000476106 ATP10BO94823 1461 aa22.03■■□□□ 1.12
SOD1-204ENST00000476106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
SOD1-204ENST00000476106 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
SOD1-204ENST00000476106 WDR7Q9Y4E6 1490 aa22.02■■□□□ 1.12
SOD1-204ENST00000476106 FYCO1Q9BQS8 1478 aa21.97■■□□□ 1.11
SOD1-204ENST00000476106 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
SOD1-204ENST00000476106 PTPRMP28827 1452 aa21.94■■□□□ 1.1
SOD1-204ENST00000476106 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
SOD1-204ENST00000476106 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
SOD1-204ENST00000476106 CFAP43Q8NDM7 1665 aa21.91■■□□□ 1.1
SOD1-204ENST00000476106 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
SOD1-204ENST00000476106 MAGI3Q5TCQ9 1506 aa21.87■■□□□ 1.09
SOD1-204ENST00000476106 KIF14Q15058 1648 aa21.86■■□□□ 1.09
SOD1-204ENST00000476106 CD109Q6YHK3 1445 aa21.86■■□□□ 1.09
SOD1-204ENST00000476106 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
SOD1-204ENST00000476106 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
SOD1-204ENST00000476106 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
SOD1-204ENST00000476106 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
SOD1-204ENST00000476106 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
SOD1-204ENST00000476106 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
SOD1-204ENST00000476106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.78■■□□□ 1.084e-8■■■□□ 14.7
SOD1-204ENST00000476106 TROQ12816 1431 aaPredicted RBP21.77■■□□□ 1.08
SOD1-204ENST00000476106 TIAM1Q13009 1591 aa21.77■■□□□ 1.08
SOD1-204ENST00000476106 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
SOD1-204ENST00000476106 ARAP3Q8WWN8 1544 aa21.74■■□□□ 1.07
SOD1-204ENST00000476106 HSPA2P54652 639 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms