RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 IL27Q8NEV9 243 aa14.77□□□□□ -0.04
ABCF1-205ENST00000475993 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
ABCF1-205ENST00000475993 MAPKBP1O60336 1514 aa14.75□□□□□ -0.05
ABCF1-205ENST00000475993 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
ABCF1-205ENST00000475993 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
ABCF1-205ENST00000475993 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
ABCF1-205ENST00000475993 SYNJ1O43426 1573 aa14.69□□□□□ -0.06
ABCF1-205ENST00000475993 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
ABCF1-205ENST00000475993 ANP32CO43423 234 aa14.68□□□□□ -0.06
ABCF1-205ENST00000475993 NBR1Q14596 966 aa14.68□□□□□ -0.06
ABCF1-205ENST00000475993 CCNB3Q8WWL7 1395 aa14.67□□□□□ -0.06
ABCF1-205ENST00000475993 ARAP1Q96P48 1450 aa14.67□□□□□ -0.06
ABCF1-205ENST00000475993 RAB3GAP2Q9H2M9 1393 aa14.65□□□□□ -0.06
ABCF1-205ENST00000475993 NOP58Q9Y2X3 529 aaKnown RBP14.62□□□□□ -0.07
ABCF1-205ENST00000475993 RANGAP1P46060 587 aaPredicted RBP14.61□□□□□ -0.07
ABCF1-205ENST00000475993 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
ABCF1-205ENST00000475993 TIMELESSQ9UNS1 1208 aa14.6□□□□□ -0.07
ABCF1-205ENST00000475993 IRX6P78412 446 aaPredicted RBP14.6□□□□□ -0.07
ABCF1-205ENST00000475993 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
ABCF1-205ENST00000475993 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
ABCF1-205ENST00000475993 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
ABCF1-205ENST00000475993 SIN3AQ96ST3 1273 aa14.55□□□□□ -0.08
ABCF1-205ENST00000475993 SETD5Q9C0A6 1442 aa14.55□□□□□ -0.08
ABCF1-205ENST00000475993 BICRAQ9NZM4 1560 aa14.55□□□□□ -0.08
ABCF1-205ENST00000475993 HNRNPUQ00839 825 aaKnown RBP eCLIP14.55□□□□□ -0.08
ABCF1-205ENST00000475993 HIRIP3Q9BW71 556 aaPredicted RBP14.53□□□□□ -0.08
ABCF1-205ENST00000475993 PRXQ9BXM0 1461 aa14.51□□□□□ -0.09
ABCF1-205ENST00000475993 RTL5Q5HYW3 569 aaPredicted RBP14.47□□□□□ -0.09
ABCF1-205ENST00000475993 B4GALNT3Q6L9W6 998 aa14.47□□□□□ -0.09
ABCF1-205ENST00000475993 ZMYND15Q9H091 742 aa14.46□□□□□ -0.09
ABCF1-205ENST00000475993 AEBP2Q6ZN18 517 aaPredicted RBP14.44□□□□□ -0.1
ABCF1-205ENST00000475993 IPO9Q96P70 1041 aaKnown RBP14.44□□□□□ -0.1
ABCF1-205ENST00000475993 TOP2BQ02880 1626 aa14.43□□□□□ -0.1
ABCF1-205ENST00000475993 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
ABCF1-205ENST00000475993 MAP3K1Q13233 1512 aa14.41□□□□□ -0.1
ABCF1-205ENST00000475993 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
ABCF1-205ENST00000475993 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
ABCF1-205ENST00000475993 ANP32AP39687 249 aaKnown RBP14.4□□□□□ -0.1
ABCF1-205ENST00000475993 GLIPR1L2Q4G1C9 344 aa14.4□□□□□ -0.1
ABCF1-205ENST00000475993 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
ABCF1-205ENST00000475993 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
ABCF1-205ENST00000475993 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
ABCF1-205ENST00000475993 C11orf95C9JLR9 678 aaPredicted RBP14.36□□□□□ -0.11
ABCF1-205ENST00000475993 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
ABCF1-205ENST00000475993 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
ABCF1-205ENST00000475993 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
ABCF1-205ENST00000475993 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
ABCF1-205ENST00000475993 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
ABCF1-205ENST00000475993 TONSLQ96HA7 1378 aa14.34□□□□□ -0.11
ABCF1-205ENST00000475993 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
ABCF1-205ENST00000475993 WASHC2CQ9Y4E1 1318 aa14.32□□□□□ -0.12
ABCF1-205ENST00000475993 USP35Q9P2H5 1018 aa14.32□□□□□ -0.12
ABCF1-205ENST00000475993 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
ABCF1-205ENST00000475993 NCOA2Q15596 1464 aa14.3□□□□□ -0.12
ABCF1-205ENST00000475993 ATAD2BQ9ULI0 1458 aa14.29□□□□□ -0.12
ABCF1-205ENST00000475993 BRPF3Q9ULD4 1205 aa14.28□□□□□ -0.12
ABCF1-205ENST00000475993 KDM5BQ9UGL1 1544 aa14.28□□□□□ -0.12
ABCF1-205ENST00000475993 FAM50AQ14320 339 aaKnown RBP14.28□□□□□ -0.12
ABCF1-205ENST00000475993 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
ABCF1-205ENST00000475993 RNF123Q5XPI4 1314 aa14.26□□□□□ -0.13
ABCF1-205ENST00000475993 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
ABCF1-205ENST00000475993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.25□□□□□ -0.13
ABCF1-205ENST00000475993 SMG6Q86US8 1419 aaKnown RBP14.25□□□□□ -0.13
ABCF1-205ENST00000475993 NEFMP07197 916 aa14.24□□□□□ -0.13
ABCF1-205ENST00000475993 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
ABCF1-205ENST00000475993 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
ABCF1-205ENST00000475993 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
ABCF1-205ENST00000475993 PDE4CQ08493 712 aa14.23□□□□□ -0.13
ABCF1-205ENST00000475993 CFAP43Q8NDM7 1665 aa14.22□□□□□ -0.13
ABCF1-205ENST00000475993 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
ABCF1-205ENST00000475993 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
ABCF1-205ENST00000475993 HSPA5P11021 654 aaKnown RBP14.21□□□□□ -0.13
ABCF1-205ENST00000475993 MRS2Q9HD23 443 aa14.2□□□□□ -0.14
ABCF1-205ENST00000475993 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
ABCF1-205ENST00000475993 RBM10P98175 930 aaKnown RBP14.18□□□□□ -0.14
ABCF1-205ENST00000475993 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
ABCF1-205ENST00000475993 PPM1GO15355 546 aaPredicted RBP14.18□□□□□ -0.14
ABCF1-205ENST00000475993 FGD1P98174 961 aa14.18□□□□□ -0.14
ABCF1-205ENST00000475993 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
ABCF1-205ENST00000475993 NUDCQ9Y266 331 aa14.16□□□□□ -0.14
ABCF1-205ENST00000475993 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
ABCF1-205ENST00000475993 HFM1A2PYH4 1435 aa14.15□□□□□ -0.14
ABCF1-205ENST00000475993 NCOA1Q15788 1441 aa14.15□□□□□ -0.14
ABCF1-205ENST00000475993 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
ABCF1-205ENST00000475993 CUX1P39880 1505 aa14.14□□□□□ -0.15
ABCF1-205ENST00000475993 CCDC7Q96M83 1385 aa14.13□□□□□ -0.15
ABCF1-205ENST00000475993 AAMPQ13685 434 aa14.13□□□□□ -0.15
ABCF1-205ENST00000475993 PTPN23Q9H3S7 1636 aa14.13□□□□□ -0.15
ABCF1-205ENST00000475993 GSE1Q14687 1217 aa14.12□□□□□ -0.15
ABCF1-205ENST00000475993 TCERG1O14776 1098 aaKnown RBP14.12□□□□□ -0.15
ABCF1-205ENST00000475993 PCF11O94913 1555 aaKnown RBP14.12□□□□□ -0.15
ABCF1-205ENST00000475993 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
ABCF1-205ENST00000475993 PDIA4P13667 645 aaKnown RBP14.1□□□□□ -0.15
ABCF1-205ENST00000475993 PDE4AP27815 886 aa14.09□□□□□ -0.15
ABCF1-205ENST00000475993 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.153e-7■■■■□ 25.7
ABCF1-205ENST00000475993 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
ABCF1-205ENST00000475993 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.15
ABCF1-205ENST00000475993 PTPRKQ15262 1439 aa14.08□□□□□ -0.16
ABCF1-205ENST00000475993 FGD6Q6ZV73 1430 aa14.08□□□□□ -0.16
ABCF1-205ENST00000475993 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms