RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
SEMA3C-208ENST00000475955 CARMIL1Q5VZK9 1371 aa16.02■□□□□ 0.16
SEMA3C-208ENST00000475955 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
SEMA3C-208ENST00000475955 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
SEMA3C-208ENST00000475955 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
SEMA3C-208ENST00000475955 IQGAP2Q13576 1575 aa15.9■□□□□ 0.14
SEMA3C-208ENST00000475955 ADCY10Q96PN6 1610 aa15.88■□□□□ 0.13
SEMA3C-208ENST00000475955 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
SEMA3C-208ENST00000475955 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
SEMA3C-208ENST00000475955 DISP1Q96F81 1524 aa15.84■□□□□ 0.13
SEMA3C-208ENST00000475955 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
SEMA3C-208ENST00000475955 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
SEMA3C-208ENST00000475955 PTPRGP23470 1445 aa15.79■□□□□ 0.12
SEMA3C-208ENST00000475955 CARMIL2Q6F5E8 1435 aa15.78■□□□□ 0.12
SEMA3C-208ENST00000475955 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
SEMA3C-208ENST00000475955 KIAA0556O60303 1618 aa15.77■□□□□ 0.12
SEMA3C-208ENST00000475955 MAPKBP1O60336 1514 aa15.77■□□□□ 0.11
SEMA3C-208ENST00000475955 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
SEMA3C-208ENST00000475955 DIP2BQ9P265 1576 aa15.72■□□□□ 0.11
SEMA3C-208ENST00000475955 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
SEMA3C-208ENST00000475955 ABCC10Q5T3U5 1492 aa15.71■□□□□ 0.11
SEMA3C-208ENST00000475955 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
SEMA3C-208ENST00000475955 ABCC2Q92887 1545 aa15.7■□□□□ 0.1
SEMA3C-208ENST00000475955 UHRF1BP1LA0JNW5 1464 aa15.7■□□□□ 0.1
SEMA3C-208ENST00000475955 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
SEMA3C-208ENST00000475955 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
SEMA3C-208ENST00000475955 TSPOAP1O95153 1857 aa15.67■□□□□ 0.1
SEMA3C-208ENST00000475955 EEA1Q15075 1411 aa15.67■□□□□ 0.1
SEMA3C-208ENST00000475955 FAM69CQ0P6D2 419 aa15.66■□□□□ 0.1
SEMA3C-208ENST00000475955 FAM9AQ8IZU1 332 aaPredicted RBP15.65■□□□□ 0.1
SEMA3C-208ENST00000475955 ZCCHC11Q5TAX3 1644 aaKnown RBP15.65■□□□□ 0.1
SEMA3C-208ENST00000475955 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
SEMA3C-208ENST00000475955 PLB1Q6P1J6 1458 aa15.64■□□□□ 0.09
SEMA3C-208ENST00000475955 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
SEMA3C-208ENST00000475955 ABCA8O94911 1581 aa15.62■□□□□ 0.09
SEMA3C-208ENST00000475955 ASXL2Q76L83 1435 aa15.62■□□□□ 0.09
SEMA3C-208ENST00000475955 SAMD9Q5K651 1589 aa15.61■□□□□ 0.09
SEMA3C-208ENST00000475955 KIF21BO75037 1637 aa15.61■□□□□ 0.09
SEMA3C-208ENST00000475955 PPRC1Q5VV67 1664 aaKnown RBP15.6■□□□□ 0.09
SEMA3C-208ENST00000475955 GLI2P10070 1586 aa15.58■□□□□ 0.08
SEMA3C-208ENST00000475955 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
SEMA3C-208ENST00000475955 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
SEMA3C-208ENST00000475955 EPRSP07814 1512 aaKnown RBP15.54■□□□□ 0.08
SEMA3C-208ENST00000475955 MAP3K4Q9Y6R4 1608 aa15.54■□□□□ 0.08
SEMA3C-208ENST00000475955 KDM6BO15054 1643 aa15.5■□□□□ 0.07
SEMA3C-208ENST00000475955 RANGAP1P46060 587 aaPredicted RBP15.5■□□□□ 0.07
SEMA3C-208ENST00000475955 WDR7Q9Y4E6 1490 aa15.5■□□□□ 0.07
SEMA3C-208ENST00000475955 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
SEMA3C-208ENST00000475955 ATP10BO94823 1461 aa15.48■□□□□ 0.07
SEMA3C-208ENST00000475955 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
SEMA3C-208ENST00000475955 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
SEMA3C-208ENST00000475955 ARID3CA6NKF2 412 aa15.46■□□□□ 0.07
SEMA3C-208ENST00000475955 CFAP43Q8NDM7 1665 aa15.44■□□□□ 0.06
SEMA3C-208ENST00000475955 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
SEMA3C-208ENST00000475955 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
SEMA3C-208ENST00000475955 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
SEMA3C-208ENST00000475955 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
SEMA3C-208ENST00000475955 UBTFP17480 764 aaKnown RBP15.4■□□□□ 0.06
SEMA3C-208ENST00000475955 ARHGAP35Q9NRY4 1499 aa15.38■□□□□ 0.05
SEMA3C-208ENST00000475955 CD109Q6YHK3 1445 aa15.37■□□□□ 0.05
SEMA3C-208ENST00000475955 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
SEMA3C-208ENST00000475955 MAGI3Q5TCQ9 1506 aa15.37■□□□□ 0.05
SEMA3C-208ENST00000475955 ABCA9Q8IUA7 1624 aa15.36■□□□□ 0.05
SEMA3C-208ENST00000475955 HRCP23327 699 aa15.34■□□□□ 0.05
SEMA3C-208ENST00000475955 LRRIQ1Q96JM4 1722 aa15.33■□□□□ 0.04
SEMA3C-208ENST00000475955 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
SEMA3C-208ENST00000475955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
SEMA3C-208ENST00000475955 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
SEMA3C-208ENST00000475955 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
SEMA3C-208ENST00000475955 HECW1Q76N89 1606 aa15.26■□□□□ 0.03
SEMA3C-208ENST00000475955 KDM4FA0A1W2PPD8 638 aa15.26■□□□□ 0.03
SEMA3C-208ENST00000475955 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
SEMA3C-208ENST00000475955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.03
SEMA3C-208ENST00000475955 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
SEMA3C-208ENST00000475955 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
SEMA3C-208ENST00000475955 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
SEMA3C-208ENST00000475955 FRMPD1Q5SYB0 1578 aa15.2■□□□□ 0.02
SEMA3C-208ENST00000475955 ATP1B4Q9UN42 357 aaPredicted RBP15.2■□□□□ 0.02
SEMA3C-208ENST00000475955 KIF14Q15058 1648 aa15.2■□□□□ 0.02
SEMA3C-208ENST00000475955 NEO1Q92859 1461 aa15.2■□□□□ 0.02
SEMA3C-208ENST00000475955 ADGRL1O94910 1474 aa15.18■□□□□ 0.02
SEMA3C-208ENST00000475955 RICTORQ6R327 1708 aa15.17■□□□□ 0.02
SEMA3C-208ENST00000475955 PHLDB1Q86UU1 1377 aa15.17■□□□□ 0.02
SEMA3C-208ENST00000475955 CLIP1P30622 1438 aa15.17■□□□□ 0.02
SEMA3C-208ENST00000475955 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
SEMA3C-208ENST00000475955 RAPGEF3O95398 923 aa15.16■□□□□ 0.02
SEMA3C-208ENST00000475955 MYO5CQ9NQX4 1742 aa15.15■□□□□ 0.02
SEMA3C-208ENST00000475955 FANCAO15360 1455 aa15.14■□□□□ 0.01
SEMA3C-208ENST00000475955 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
SEMA3C-208ENST00000475955 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
SEMA3C-208ENST00000475955 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
SEMA3C-208ENST00000475955 PLCH2O75038 1416 aa15.12■□□□□ 0.01
SEMA3C-208ENST00000475955 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
SEMA3C-208ENST00000475955 CDC42BPBQ9Y5S2 1711 aa15.11■□□□□ 0.01
SEMA3C-208ENST00000475955 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
SEMA3C-208ENST00000475955 CDK11AQ9UQ88 783 aaPredicted RBP15.09■□□□□ 0.01
SEMA3C-208ENST00000475955 DENND4BO75064 1496 aaPredicted RBP15.08■□□□□ 0.01
SEMA3C-208ENST00000475955 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0
SEMA3C-208ENST00000475955 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
SEMA3C-208ENST00000475955 PCGF6Q9BYE7 350 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms