RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 NUP160Q12769 1436 aa12.87□□□□□ -0.35
UBE4B-208ENST00000475795 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
UBE4B-208ENST00000475795 ERICH3Q5RHP9 1530 aa12.86□□□□□ -0.35
UBE4B-208ENST00000475795 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
UBE4B-208ENST00000475795 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
UBE4B-208ENST00000475795 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
UBE4B-208ENST00000475795 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
UBE4B-208ENST00000475795 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
UBE4B-208ENST00000475795 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
UBE4B-208ENST00000475795 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
UBE4B-208ENST00000475795 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
UBE4B-208ENST00000475795 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
UBE4B-208ENST00000475795 CUL7Q14999 1698 aa12.69□□□□□ -0.38
UBE4B-208ENST00000475795 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
UBE4B-208ENST00000475795 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
UBE4B-208ENST00000475795 IGF1RP08069 1367 aa12.65□□□□□ -0.38
UBE4B-208ENST00000475795 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
UBE4B-208ENST00000475795 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
UBE4B-208ENST00000475795 MAPKBP1O60336 1514 aa12.6□□□□□ -0.39
UBE4B-208ENST00000475795 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
UBE4B-208ENST00000475795 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
UBE4B-208ENST00000475795 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
UBE4B-208ENST00000475795 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
UBE4B-208ENST00000475795 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
UBE4B-208ENST00000475795 FAM69CQ0P6D2 419 aa12.53□□□□□ -0.4
UBE4B-208ENST00000475795 PTPRGP23470 1445 aa12.51□□□□□ -0.41
UBE4B-208ENST00000475795 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
UBE4B-208ENST00000475795 CARMIL2Q6F5E8 1435 aa12.5□□□□□ -0.41
UBE4B-208ENST00000475795 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
UBE4B-208ENST00000475795 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
UBE4B-208ENST00000475795 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
UBE4B-208ENST00000475795 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
UBE4B-208ENST00000475795 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
UBE4B-208ENST00000475795 KDM6BO15054 1643 aa12.46□□□□□ -0.41
UBE4B-208ENST00000475795 DISP1Q96F81 1524 aa12.46□□□□□ -0.42
UBE4B-208ENST00000475795 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
UBE4B-208ENST00000475795 UGGT2Q9NYU1 1516 aa12.45□□□□□ -0.42
UBE4B-208ENST00000475795 UHRF1BP1LA0JNW5 1464 aa12.45□□□□□ -0.42
UBE4B-208ENST00000475795 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
UBE4B-208ENST00000475795 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
UBE4B-208ENST00000475795 KCNA4P22459 653 aa12.43□□□□□ -0.42
UBE4B-208ENST00000475795 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
UBE4B-208ENST00000475795 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
UBE4B-208ENST00000475795 ASXL2Q76L83 1435 aa12.42□□□□□ -0.42
UBE4B-208ENST00000475795 UACAQ9BZF9 1416 aa12.42□□□□□ -0.42
UBE4B-208ENST00000475795 GLI2P10070 1586 aa12.42□□□□□ -0.42
UBE4B-208ENST00000475795 PPRC1Q5VV67 1664 aaKnown RBP12.42□□□□□ -0.42
UBE4B-208ENST00000475795 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
UBE4B-208ENST00000475795 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
UBE4B-208ENST00000475795 ZCCHC11Q5TAX3 1644 aaKnown RBP12.39□□□□□ -0.43
UBE4B-208ENST00000475795 MAP3K4Q9Y6R4 1608 aa12.36□□□□□ -0.43
UBE4B-208ENST00000475795 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
UBE4B-208ENST00000475795 GOLGA3Q08378 1498 aa12.34□□□□□ -0.43
UBE4B-208ENST00000475795 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
UBE4B-208ENST00000475795 ABCA8O94911 1581 aa12.3□□□□□ -0.44
UBE4B-208ENST00000475795 TEX14Q8IWB6 1497 aa12.3□□□□□ -0.44
UBE4B-208ENST00000475795 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
UBE4B-208ENST00000475795 KDM4FA0A1W2PPD8 638 aa12.3□□□□□ -0.44
UBE4B-208ENST00000475795 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.44
UBE4B-208ENST00000475795 CFAP43Q8NDM7 1665 aa12.27□□□□□ -0.45
UBE4B-208ENST00000475795 NPM3O75607 178 aaKnown RBP12.25□□□□□ -0.45
UBE4B-208ENST00000475795 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
UBE4B-208ENST00000475795 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
UBE4B-208ENST00000475795 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
UBE4B-208ENST00000475795 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
UBE4B-208ENST00000475795 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-208ENST00000475795 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
UBE4B-208ENST00000475795 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
UBE4B-208ENST00000475795 ATP10BO94823 1461 aa12.18□□□□□ -0.46
UBE4B-208ENST00000475795 RAPGEF6Q8TEU7 1601 aa12.18□□□□□ -0.46
UBE4B-208ENST00000475795 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
UBE4B-208ENST00000475795 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
UBE4B-208ENST00000475795 EEA1Q15075 1411 aa12.17□□□□□ -0.46
UBE4B-208ENST00000475795 ABCA9Q8IUA7 1624 aa12.16□□□□□ -0.46
UBE4B-208ENST00000475795 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
UBE4B-208ENST00000475795 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
UBE4B-208ENST00000475795 ARAP3Q8WWN8 1544 aa12.14□□□□□ -0.47
UBE4B-208ENST00000475795 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
UBE4B-208ENST00000475795 KIF21BO75037 1637 aa12.12□□□□□ -0.47
UBE4B-208ENST00000475795 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
UBE4B-208ENST00000475795 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
UBE4B-208ENST00000475795 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
UBE4B-208ENST00000475795 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
UBE4B-208ENST00000475795 HECW2Q9P2P5 1572 aa12.09□□□□□ -0.47
UBE4B-208ENST00000475795 NEO1Q92859 1461 aa12.08□□□□□ -0.48
UBE4B-208ENST00000475795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
UBE4B-208ENST00000475795 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
UBE4B-208ENST00000475795 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
UBE4B-208ENST00000475795 FRMPD1Q5SYB0 1578 aa12.05□□□□□ -0.48
UBE4B-208ENST00000475795 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
UBE4B-208ENST00000475795 CFAP74Q9C0B2 1584 aa12.02□□□□□ -0.49
UBE4B-208ENST00000475795 RAPGEF3O95398 923 aa12.02□□□□□ -0.49
UBE4B-208ENST00000475795 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
UBE4B-208ENST00000475795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBE4B-208ENST00000475795 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
UBE4B-208ENST00000475795 TTC37Q6PGP7 1564 aa12.01□□□□□ -0.49
UBE4B-208ENST00000475795 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
UBE4B-208ENST00000475795 ARHGEF40Q8TER5 1519 aa12□□□□□ -0.49
UBE4B-208ENST00000475795 CDK13Q14004 1512 aaKnown RBP11.99□□□□□ -0.49
UBE4B-208ENST00000475795 FANCAO15360 1455 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms