RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
ABCF3-211ENST00000475728 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
ABCF3-211ENST00000475728 KIAA0586Q9BVV6 1533 aa24.2■■□□□ 1.47
ABCF3-211ENST00000475728 JPH4Q96JJ6 628 aa24.2■■□□□ 1.46
ABCF3-211ENST00000475728 EEA1Q15075 1411 aa24.19■■□□□ 1.46
ABCF3-211ENST00000475728 SHROOM2Q13796 1616 aa24.19■■□□□ 1.46
ABCF3-211ENST00000475728 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
ABCF3-211ENST00000475728 CSRNP3Q8WYN3 585 aa24.12■■□□□ 1.45
ABCF3-211ENST00000475728 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
ABCF3-211ENST00000475728 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
ABCF3-211ENST00000475728 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
ABCF3-211ENST00000475728 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
ABCF3-211ENST00000475728 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
ABCF3-211ENST00000475728 UGGT2Q9NYU1 1516 aa23.92■■□□□ 1.42
ABCF3-211ENST00000475728 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
ABCF3-211ENST00000475728 TNIKQ9UKE5 1360 aa23.89■■□□□ 1.41
ABCF3-211ENST00000475728 PTPRGP23470 1445 aa23.87■■□□□ 1.41
ABCF3-211ENST00000475728 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
ABCF3-211ENST00000475728 KIF21BO75037 1637 aa23.85■■□□□ 1.41
ABCF3-211ENST00000475728 DISP1Q96F81 1524 aa23.84■■□□□ 1.41
ABCF3-211ENST00000475728 KIAA0556O60303 1618 aa23.79■■□□□ 1.4
ABCF3-211ENST00000475728 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
ABCF3-211ENST00000475728 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
ABCF3-211ENST00000475728 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.39
ABCF3-211ENST00000475728 UACAQ9BZF9 1416 aa23.7■■□□□ 1.38
ABCF3-211ENST00000475728 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
ABCF3-211ENST00000475728 UHRF1BP1LA0JNW5 1464 aa23.68■■□□□ 1.38
ABCF3-211ENST00000475728 ABCC2Q92887 1545 aa23.64■■□□□ 1.37
ABCF3-211ENST00000475728 SAMD9Q5K651 1589 aa23.62■■□□□ 1.37
ABCF3-211ENST00000475728 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
ABCF3-211ENST00000475728 MAPKBP1O60336 1514 aa23.62■■□□□ 1.37
ABCF3-211ENST00000475728 P3H3Q8IVL6 736 aa23.6■■□□□ 1.37
ABCF3-211ENST00000475728 KIF13AQ9H1H9 1805 aa23.6■■□□□ 1.37
ABCF3-211ENST00000475728 EFCAB5A4FU69 1503 aa23.59■■□□□ 1.37
ABCF3-211ENST00000475728 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
ABCF3-211ENST00000475728 PLB1Q6P1J6 1458 aa23.56■■□□□ 1.36
ABCF3-211ENST00000475728 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
ABCF3-211ENST00000475728 ABCA8O94911 1581 aa23.54■■□□□ 1.36
ABCF3-211ENST00000475728 ILDR1Q86SU0 546 aaPredicted RBP23.52■■□□□ 1.36
ABCF3-211ENST00000475728 ABCC10Q5T3U5 1492 aa23.51■■□□□ 1.35
ABCF3-211ENST00000475728 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
ABCF3-211ENST00000475728 ASXL2Q76L83 1435 aa23.48■■□□□ 1.35
ABCF3-211ENST00000475728 FAM69CQ0P6D2 419 aa23.47■■□□□ 1.35
ABCF3-211ENST00000475728 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
ABCF3-211ENST00000475728 DIP2BQ9P265 1576 aa23.43■■□□□ 1.34
ABCF3-211ENST00000475728 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
ABCF3-211ENST00000475728 KDM4FA0A1W2PPD8 638 aa23.41■■□□□ 1.34
ABCF3-211ENST00000475728 ARHGAP35Q9NRY4 1499 aa23.41■■□□□ 1.34
ABCF3-211ENST00000475728 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
ABCF3-211ENST00000475728 WDR7Q9Y4E6 1490 aa23.36■■□□□ 1.33
ABCF3-211ENST00000475728 ATP10BO94823 1461 aa23.36■■□□□ 1.33
ABCF3-211ENST00000475728 GLI2P10070 1586 aa23.34■■□□□ 1.33
ABCF3-211ENST00000475728 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.33
ABCF3-211ENST00000475728 NUP153P49790 1475 aaKnown RBP23.33■■□□□ 1.33
ABCF3-211ENST00000475728 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
ABCF3-211ENST00000475728 CLIP1P30622 1438 aa23.32■■□□□ 1.32
ABCF3-211ENST00000475728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
ABCF3-211ENST00000475728 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
ABCF3-211ENST00000475728 KDM6BO15054 1643 aa23.28■■□□□ 1.32
ABCF3-211ENST00000475728 KCNH8Q96L42 1107 aa23.25■■□□□ 1.31
ABCF3-211ENST00000475728 HECW1Q76N89 1606 aa23.23■■□□□ 1.31
ABCF3-211ENST00000475728 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
ABCF3-211ENST00000475728 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
ABCF3-211ENST00000475728 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
ABCF3-211ENST00000475728 CEP162Q5TB80 1403 aa23.2■■□□□ 1.3
ABCF3-211ENST00000475728 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
ABCF3-211ENST00000475728 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
ABCF3-211ENST00000475728 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
ABCF3-211ENST00000475728 LOC105371045A0A1W2PR82 267 aa23.18■■□□□ 1.3
ABCF3-211ENST00000475728 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
ABCF3-211ENST00000475728 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
ABCF3-211ENST00000475728 CFAP43Q8NDM7 1665 aa23.14■■□□□ 1.29
ABCF3-211ENST00000475728 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
ABCF3-211ENST00000475728 FYCO1Q9BQS8 1478 aa23.12■■□□□ 1.29
ABCF3-211ENST00000475728 MAGI3Q5TCQ9 1506 aa23.12■■□□□ 1.29
ABCF3-211ENST00000475728 CCDC18Q5T9S5 1454 aa23.11■■□□□ 1.29
ABCF3-211ENST00000475728 PCF11O94913 1555 aaKnown RBP23.1■■□□□ 1.29
ABCF3-211ENST00000475728 PPRC1Q5VV67 1664 aaKnown RBP23.09■■□□□ 1.29
ABCF3-211ENST00000475728 ABCA9Q8IUA7 1624 aa23.09■■□□□ 1.29
ABCF3-211ENST00000475728 ADGRL1O94910 1474 aa23.04■■□□□ 1.28
ABCF3-211ENST00000475728 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
ABCF3-211ENST00000475728 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
ABCF3-211ENST00000475728 HECW2Q9P2P5 1572 aa22.99■■□□□ 1.27
ABCF3-211ENST00000475728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
ABCF3-211ENST00000475728 NEO1Q92859 1461 aa22.97■■□□□ 1.27
ABCF3-211ENST00000475728 KIF14Q15058 1648 aa22.96■■□□□ 1.27
ABCF3-211ENST00000475728 LRRIQ1Q96JM4 1722 aa22.96■■□□□ 1.27
ABCF3-211ENST00000475728 VPS8Q8N3P4 1428 aa22.93■■□□□ 1.26
ABCF3-211ENST00000475728 TTC37Q6PGP7 1564 aa22.93■■□□□ 1.26
ABCF3-211ENST00000475728 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
ABCF3-211ENST00000475728 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
ABCF3-211ENST00000475728 PLCH2O75038 1416 aa22.9■■□□□ 1.26
ABCF3-211ENST00000475728 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
ABCF3-211ENST00000475728 FANCAO15360 1455 aa22.89■■□□□ 1.25
ABCF3-211ENST00000475728 MTUS2Q5JR59 1369 aa22.89■■□□□ 1.25
ABCF3-211ENST00000475728 EFCAB2Q5VUJ9 269 aa22.86■■□□□ 1.25
ABCF3-211ENST00000475728 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
ABCF3-211ENST00000475728 MYO5CQ9NQX4 1742 aa22.82■■□□□ 1.24
ABCF3-211ENST00000475728 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
ABCF3-211ENST00000475728 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 814.7 ms