RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 CUL7Q14999 1698 aa21.88■■□□□ 1.09
CCDC57-208ENST00000475635 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
CCDC57-208ENST00000475635 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
CCDC57-208ENST00000475635 IGF1RP08069 1367 aa21.83■■□□□ 1.08
CCDC57-208ENST00000475635 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
CCDC57-208ENST00000475635 KIAA0586Q9BVV6 1533 aa21.81■■□□□ 1.08
CCDC57-208ENST00000475635 MAPKBP1O60336 1514 aa21.78■■□□□ 1.08
CCDC57-208ENST00000475635 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
CCDC57-208ENST00000475635 ABCC10Q5T3U5 1492 aa21.75■■□□□ 1.07
CCDC57-208ENST00000475635 DIP2BQ9P265 1576 aa21.74■■□□□ 1.07
CCDC57-208ENST00000475635 FAM69CQ0P6D2 419 aa21.72■■□□□ 1.07
CCDC57-208ENST00000475635 TSPOAP1O95153 1857 aa21.71■■□□□ 1.07
CCDC57-208ENST00000475635 CARMIL1Q5VZK9 1371 aa21.7■■□□□ 1.06
CCDC57-208ENST00000475635 IQGAP2Q13576 1575 aa21.63■■□□□ 1.05
CCDC57-208ENST00000475635 PTPRGP23470 1445 aa21.63■■□□□ 1.05
CCDC57-208ENST00000475635 CARMIL2Q6F5E8 1435 aa21.6■■□□□ 1.05
CCDC57-208ENST00000475635 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
CCDC57-208ENST00000475635 KDM6BO15054 1643 aa21.58■■□□□ 1.05
CCDC57-208ENST00000475635 TNIKQ9UKE5 1360 aa21.58■■□□□ 1.04
CCDC57-208ENST00000475635 ABCC2Q92887 1545 aa21.55■■□□□ 1.04
CCDC57-208ENST00000475635 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
CCDC57-208ENST00000475635 RAPGEF2Q9Y4G8 1499 aa21.5■■□□□ 1.03
CCDC57-208ENST00000475635 UHRF1BP1LA0JNW5 1464 aa21.49■■□□□ 1.03
CCDC57-208ENST00000475635 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
CCDC57-208ENST00000475635 PPRC1Q5VV67 1664 aaKnown RBP21.48■■□□□ 1.03
CCDC57-208ENST00000475635 UACAQ9BZF9 1416 aa21.47■■□□□ 1.03
CCDC57-208ENST00000475635 UGGT2Q9NYU1 1516 aa21.47■■□□□ 1.03
CCDC57-208ENST00000475635 PLB1Q6P1J6 1458 aa21.46■■□□□ 1.03
CCDC57-208ENST00000475635 GLI2P10070 1586 aa21.46■■□□□ 1.03
CCDC57-208ENST00000475635 CTTNBP2Q8WZ74 1663 aa21.45■■□□□ 1.02
CCDC57-208ENST00000475635 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
CCDC57-208ENST00000475635 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
CCDC57-208ENST00000475635 KDM5BQ9UGL1 1544 aa21.4■■□□□ 1.02
CCDC57-208ENST00000475635 MAP3K4Q9Y6R4 1608 aa21.38■■□□□ 1.01
CCDC57-208ENST00000475635 EPRSP07814 1512 aaKnown RBP21.35■■□□□ 1.01
CCDC57-208ENST00000475635 KDM4FA0A1W2PPD8 638 aa21.35■■□□□ 1.01
CCDC57-208ENST00000475635 GOLGA3Q08378 1498 aa21.28■■□□□ 1
CCDC57-208ENST00000475635 TEX14Q8IWB6 1497 aa21.27■■□□□ 1
CCDC57-208ENST00000475635 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
CCDC57-208ENST00000475635 WDR7Q9Y4E6 1490 aa21.26■□□□□ 0.99
CCDC57-208ENST00000475635 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
CCDC57-208ENST00000475635 ABCA8O94911 1581 aa21.24■□□□□ 0.99
CCDC57-208ENST00000475635 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
CCDC57-208ENST00000475635 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
CCDC57-208ENST00000475635 KCNH8Q96L42 1107 aa21.13■□□□□ 0.97
CCDC57-208ENST00000475635 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
CCDC57-208ENST00000475635 CD109Q6YHK3 1445 aa21.12■□□□□ 0.97
CCDC57-208ENST00000475635 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
CCDC57-208ENST00000475635 SAMD9Q5K651 1589 aa21.06■□□□□ 0.96
CCDC57-208ENST00000475635 ARID3CA6NKF2 412 aa21.05■□□□□ 0.96
CCDC57-208ENST00000475635 FAM9AQ8IZU1 332 aaPredicted RBP21.05■□□□□ 0.96
CCDC57-208ENST00000475635 ATP10BO94823 1461 aa21.03■□□□□ 0.96
CCDC57-208ENST00000475635 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
CCDC57-208ENST00000475635 RAPGEF6Q8TEU7 1601 aa21.02■□□□□ 0.96
CCDC57-208ENST00000475635 KIF21BO75037 1637 aa21■□□□□ 0.95
CCDC57-208ENST00000475635 ABCA9Q8IUA7 1624 aa21■□□□□ 0.95
CCDC57-208ENST00000475635 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
CCDC57-208ENST00000475635 HECW2Q9P2P5 1572 aa20.96■□□□□ 0.95
CCDC57-208ENST00000475635 EEA1Q15075 1411 aa20.94■□□□□ 0.94
CCDC57-208ENST00000475635 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
CCDC57-208ENST00000475635 NUP153P49790 1475 aaKnown RBP20.89■□□□□ 0.94
CCDC57-208ENST00000475635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
CCDC57-208ENST00000475635 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.93
CCDC57-208ENST00000475635 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
CCDC57-208ENST00000475635 PHLDB1Q86UU1 1377 aa20.88■□□□□ 0.93
CCDC57-208ENST00000475635 NEO1Q92859 1461 aa20.86■□□□□ 0.93
CCDC57-208ENST00000475635 RAPGEF3O95398 923 aa20.83■□□□□ 0.93
CCDC57-208ENST00000475635 FRMPD1Q5SYB0 1578 aa20.83■□□□□ 0.92
CCDC57-208ENST00000475635 EFCAB5A4FU69 1503 aa20.82■□□□□ 0.92
CCDC57-208ENST00000475635 ADAMTSL3P82987 1691 aa20.81■□□□□ 0.92
CCDC57-208ENST00000475635 ILDR1Q86SU0 546 aaPredicted RBP20.81■□□□□ 0.92
CCDC57-208ENST00000475635 BCORL1Q5H9F3 1711 aa20.78■□□□□ 0.92
CCDC57-208ENST00000475635 RICTORQ6R327 1708 aa20.78■□□□□ 0.92
CCDC57-208ENST00000475635 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
CCDC57-208ENST00000475635 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
CCDC57-208ENST00000475635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.74■□□□□ 0.91
CCDC57-208ENST00000475635 TTC37Q6PGP7 1564 aa20.74■□□□□ 0.91
CCDC57-208ENST00000475635 PTPRMP28827 1452 aa20.73■□□□□ 0.91
CCDC57-208ENST00000475635 ARHGEF40Q8TER5 1519 aa20.73■□□□□ 0.91
CCDC57-208ENST00000475635 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
CCDC57-208ENST00000475635 FANCAO15360 1455 aa20.71■□□□□ 0.91
CCDC57-208ENST00000475635 DENND4BO75064 1496 aaPredicted RBP20.71■□□□□ 0.91
CCDC57-208ENST00000475635 AKNAQ7Z591 1439 aa20.7■□□□□ 0.9
CCDC57-208ENST00000475635 CDK13Q14004 1512 aaKnown RBP20.7■□□□□ 0.9
CCDC57-208ENST00000475635 ARID4BQ4LE39 1312 aaPredicted RBP20.69■□□□□ 0.9
CCDC57-208ENST00000475635 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
CCDC57-208ENST00000475635 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
CCDC57-208ENST00000475635 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.9
CCDC57-208ENST00000475635 HECW1Q76N89 1606 aa20.64■□□□□ 0.89
CCDC57-208ENST00000475635 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
CCDC57-208ENST00000475635 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
CCDC57-208ENST00000475635 MYO5CQ9NQX4 1742 aa20.63■□□□□ 0.89
CCDC57-208ENST00000475635 ZFYVE16Q7Z3T8 1539 aa20.62■□□□□ 0.89
CCDC57-208ENST00000475635 FMN1Q68DA7 1419 aa20.61■□□□□ 0.89
CCDC57-208ENST00000475635 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
CCDC57-208ENST00000475635 PCF11O94913 1555 aaKnown RBP20.59■□□□□ 0.89
CCDC57-208ENST00000475635 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
CCDC57-208ENST00000475635 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
CCDC57-208ENST00000475635 PLCH2O75038 1416 aa20.58■□□□□ 0.88
CCDC57-208ENST00000475635 YEATS2Q9ULM3 1422 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms