RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 ARHGAP35Q9NRY4 1499 aa28.49■■■□□ 2.15
HIF3A-207ENST00000475432 CHMP7Q8WUX9 453 aaPredicted RBP28.48■■■□□ 2.15
HIF3A-207ENST00000475432 ARAP1Q96P48 1450 aa28.45■■■□□ 2.15
HIF3A-207ENST00000475432 VPS8Q8N3P4 1428 aa28.44■■■□□ 2.14
HIF3A-207ENST00000475432 FBLN2P98095 1184 aa28.43■■■□□ 2.14
HIF3A-207ENST00000475432 EFCAB5A4FU69 1503 aa28.35■■■□□ 2.13
HIF3A-207ENST00000475432 IQGAP2Q13576 1575 aa28.34■■■□□ 2.13
HIF3A-207ENST00000475432 KIAA0586Q9BVV6 1533 aa28.34■■■□□ 2.13
HIF3A-207ENST00000475432 NUP160Q12769 1436 aa28.31■■■□□ 2.12
HIF3A-207ENST00000475432 CEP170Q5SW79 1584 aa28.3■■■□□ 2.12
HIF3A-207ENST00000475432 P3H3Q8IVL6 736 aa28.3■■■□□ 2.12
HIF3A-207ENST00000475432 SAMD9Q5K651 1589 aa28.26■■■□□ 2.11
HIF3A-207ENST00000475432 FHOD3Q2V2M9 1422 aa28.26■■■□□ 2.11
HIF3A-207ENST00000475432 PPARGC1BQ86YN6 1023 aaKnown RBP28.23■■■□□ 2.11
HIF3A-207ENST00000475432 UGGT2Q9NYU1 1516 aa28.22■■■□□ 2.11
HIF3A-207ENST00000475432 CHD1O14646 1710 aa28.18■■■□□ 2.1
HIF3A-207ENST00000475432 APLP2Q06481 763 aa28.15■■■□□ 2.1
HIF3A-207ENST00000475432 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
HIF3A-207ENST00000475432 DISP1Q96F81 1524 aa28.11■■■□□ 2.09
HIF3A-207ENST00000475432 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
HIF3A-207ENST00000475432 TRIM26Q12899 539 aaPredicted RBP28.08■■■□□ 2.08
HIF3A-207ENST00000475432 KIAA0556O60303 1618 aa28.06■■■□□ 2.08
HIF3A-207ENST00000475432 PCF11O94913 1555 aaKnown RBP28.05■■■□□ 2.08
HIF3A-207ENST00000475432 CASKIN1Q8WXD9 1431 aa28.04■■■□□ 2.08
HIF3A-207ENST00000475432 TTBK1Q5TCY1 1321 aaPredicted RBP28.04■■■□□ 2.08
HIF3A-207ENST00000475432 PCGF6Q9BYE7 350 aa28.03■■■□□ 2.08
HIF3A-207ENST00000475432 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
HIF3A-207ENST00000475432 CARMIL2Q6F5E8 1435 aa27.99■■■□□ 2.07
HIF3A-207ENST00000475432 ATP1B4Q9UN42 357 aaPredicted RBP27.97■■■□□ 2.07
HIF3A-207ENST00000475432 MAP3K1Q13233 1512 aa27.95■■■□□ 2.06
HIF3A-207ENST00000475432 KANK4Q5T7N3 995 aaPredicted RBP27.94■■■□□ 2.06
HIF3A-207ENST00000475432 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
HIF3A-207ENST00000475432 TIAM1Q13009 1591 aa27.92■■■□□ 2.06
HIF3A-207ENST00000475432 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
HIF3A-207ENST00000475432 SHROOM2Q13796 1616 aa27.9■■■□□ 2.06
HIF3A-207ENST00000475432 CFAP43Q8NDM7 1665 aa27.84■■■□□ 2.05
HIF3A-207ENST00000475432 LRRC9Q6ZRR7 1453 aa27.82■■■□□ 2.04
HIF3A-207ENST00000475432 HECW1Q76N89 1606 aa27.81■■■□□ 2.04
HIF3A-207ENST00000475432 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
HIF3A-207ENST00000475432 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
HIF3A-207ENST00000475432 LRRIQ1Q96JM4 1722 aa27.76■■■□□ 2.03
HIF3A-207ENST00000475432 PLB1Q6P1J6 1458 aa27.75■■■□□ 2.03
HIF3A-207ENST00000475432 RAPGEF6Q8TEU7 1601 aa27.75■■■□□ 2.03
HIF3A-207ENST00000475432 EPRSP07814 1512 aaKnown RBP27.74■■■□□ 2.03
HIF3A-207ENST00000475432 PTPRGP23470 1445 aa27.74■■■□□ 2.03
HIF3A-207ENST00000475432 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
HIF3A-207ENST00000475432 NUP153P49790 1475 aaKnown RBP27.72■■■□□ 2.03
HIF3A-207ENST00000475432 CDK13Q14004 1512 aaKnown RBP27.68■■■□□ 2.02
HIF3A-207ENST00000475432 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
HIF3A-207ENST00000475432 MTUS2Q5JR59 1369 aa27.67■■■□□ 2.02
HIF3A-207ENST00000475432 ABCA8O94911 1581 aa27.67■■■□□ 2.02
HIF3A-207ENST00000475432 MAGI3Q5TCQ9 1506 aa27.61■■■□□ 2.01
HIF3A-207ENST00000475432 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
HIF3A-207ENST00000475432 PHLDB1Q86UU1 1377 aa27.57■■■□□ 2
HIF3A-207ENST00000475432 UACAQ9BZF9 1416 aa27.57■■■□□ 2
HIF3A-207ENST00000475432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.57■■■□□ 2
HIF3A-207ENST00000475432 HNRNPUL2Q1KMD3 747 aaKnown RBP27.57■■■□□ 2
HIF3A-207ENST00000475432 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
HIF3A-207ENST00000475432 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
HIF3A-207ENST00000475432 ATP10BO94823 1461 aa27.51■■□□□ 1.99
HIF3A-207ENST00000475432 NCOA2Q15596 1464 aa27.51■■□□□ 1.99
HIF3A-207ENST00000475432 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
HIF3A-207ENST00000475432 SUPT6HQ7KZ85 1726 aaKnown RBP27.48■■□□□ 1.99
HIF3A-207ENST00000475432 ABCC2Q92887 1545 aa27.47■■□□□ 1.99
HIF3A-207ENST00000475432 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
HIF3A-207ENST00000475432 TROQ12816 1431 aaPredicted RBP27.43■■□□□ 1.98
HIF3A-207ENST00000475432 UHRF1BP1LA0JNW5 1464 aa27.43■■□□□ 1.98
HIF3A-207ENST00000475432 PLEKHD1A6NEE1 506 aa27.4■■□□□ 1.98
HIF3A-207ENST00000475432 MYOM3Q5VTT5 1437 aa27.39■■□□□ 1.98
HIF3A-207ENST00000475432 FGD6Q6ZV73 1430 aa27.38■■□□□ 1.97
HIF3A-207ENST00000475432 KDM5BQ9UGL1 1544 aa27.32■■□□□ 1.96
HIF3A-207ENST00000475432 FAM50AQ14320 339 aaKnown RBP27.32■■□□□ 1.96
HIF3A-207ENST00000475432 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.3■■□□□ 1.96
HIF3A-207ENST00000475432 ADCY10Q96PN6 1610 aa27.29■■□□□ 1.96
HIF3A-207ENST00000475432 KIF14Q15058 1648 aa27.27■■□□□ 1.96
HIF3A-207ENST00000475432 ZCCHC11Q5TAX3 1644 aaKnown RBP27.25■■□□□ 1.95
HIF3A-207ENST00000475432 MIA2Q96PC5 1412 aa27.25■■□□□ 1.95
HIF3A-207ENST00000475432 ITGAEP38570 1179 aa27.24■■□□□ 1.95
HIF3A-207ENST00000475432 PTPN23Q9H3S7 1636 aa27.21■■□□□ 1.95
HIF3A-207ENST00000475432 ABCC10Q5T3U5 1492 aa27.2■■□□□ 1.95
HIF3A-207ENST00000475432 TCOF1Q13428 1488 aaKnown RBP27.2■■□□□ 1.94
HIF3A-207ENST00000475432 GPATCH8Q9UKJ3 1502 aaKnown RBP27.18■■□□□ 1.94
HIF3A-207ENST00000475432 CFDP1Q9UEE9 299 aaPredicted RBP27.13■■□□□ 1.93
HIF3A-207ENST00000475432 RIMBP3CA6NJZ7 1639 aa27.12■■□□□ 1.93
HIF3A-207ENST00000475432 RIMBP3BA6NNM3 1639 aa27.12■■□□□ 1.93
HIF3A-207ENST00000475432 RIMBP3Q9UFD9 1639 aa27.12■■□□□ 1.93
HIF3A-207ENST00000475432 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
HIF3A-207ENST00000475432 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
HIF3A-207ENST00000475432 ZNF644Q9H582 1327 aaPredicted RBP27.08■■□□□ 1.93
HIF3A-207ENST00000475432 NPM1P06748 294 aaKnown RBP eCLIP27.08■■□□□ 1.93
HIF3A-207ENST00000475432 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.07■■□□□ 1.92
HIF3A-207ENST00000475432 WDR7Q9Y4E6 1490 aa27.07■■□□□ 1.92
HIF3A-207ENST00000475432 PTPRKQ15262 1439 aa27.06■■□□□ 1.92
HIF3A-207ENST00000475432 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
HIF3A-207ENST00000475432 HRCP23327 699 aa27.06■■□□□ 1.92
HIF3A-207ENST00000475432 CDC42BPAQ5VT25 1732 aa27.05■■□□□ 1.92
HIF3A-207ENST00000475432 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
HIF3A-207ENST00000475432 ASXL2Q76L83 1435 aa27.04■■□□□ 1.92
HIF3A-207ENST00000475432 CAMSAP2Q08AD1 1489 aa27.03■■□□□ 1.92
HIF3A-207ENST00000475432 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms