RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 RUSC2Q8N2Y8 1516 aa28.92■■■□□ 2.22
DKC1-208ENST00000475423 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
DKC1-208ENST00000475423 CUL7Q14999 1698 aa28.82■■■□□ 2.2
DKC1-208ENST00000475423 KIAA0586Q9BVV6 1533 aa28.81■■■□□ 2.2
DKC1-208ENST00000475423 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
DKC1-208ENST00000475423 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
DKC1-208ENST00000475423 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.18
DKC1-208ENST00000475423 NPM1P06748 294 aaKnown RBP eCLIP28.65■■■□□ 2.18
DKC1-208ENST00000475423 ADCY10Q96PN6 1610 aa28.64■■■□□ 2.18
DKC1-208ENST00000475423 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
DKC1-208ENST00000475423 ABCC10Q5T3U5 1492 aa28.6■■■□□ 2.17
DKC1-208ENST00000475423 FAM69CQ0P6D2 419 aa28.56■■■□□ 2.16
DKC1-208ENST00000475423 PTPRGP23470 1445 aa28.53■■■□□ 2.16
DKC1-208ENST00000475423 DIP2BQ9P265 1576 aa28.51■■■□□ 2.15
DKC1-208ENST00000475423 CARMIL2Q6F5E8 1435 aa28.51■■■□□ 2.15
DKC1-208ENST00000475423 IQGAP2Q13576 1575 aa28.5■■■□□ 2.15
DKC1-208ENST00000475423 TNIKQ9UKE5 1360 aa28.48■■■□□ 2.15
DKC1-208ENST00000475423 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
DKC1-208ENST00000475423 DISP1Q96F81 1524 aa28.39■■■□□ 2.14
DKC1-208ENST00000475423 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.13
DKC1-208ENST00000475423 ABCC2Q92887 1545 aa28.38■■■□□ 2.13
DKC1-208ENST00000475423 UHRF1BP1LA0JNW5 1464 aa28.35■■■□□ 2.13
DKC1-208ENST00000475423 UGGT2Q9NYU1 1516 aa28.35■■■□□ 2.13
DKC1-208ENST00000475423 UACAQ9BZF9 1416 aa28.31■■■□□ 2.12
DKC1-208ENST00000475423 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
DKC1-208ENST00000475423 PLB1Q6P1J6 1458 aa28.27■■■□□ 2.12
DKC1-208ENST00000475423 ASXL2Q76L83 1435 aa28.27■■■□□ 2.12
DKC1-208ENST00000475423 KDM6BO15054 1643 aa28.25■■■□□ 2.11
DKC1-208ENST00000475423 KIAA0556O60303 1618 aa28.24■■■□□ 2.11
DKC1-208ENST00000475423 GLI2P10070 1586 aa28.23■■■□□ 2.11
DKC1-208ENST00000475423 KDM5BQ9UGL1 1544 aa28.22■■■□□ 2.11
DKC1-208ENST00000475423 CTTNBP2Q8WZ74 1663 aa28.18■■■□□ 2.1
DKC1-208ENST00000475423 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
DKC1-208ENST00000475423 PPRC1Q5VV67 1664 aaKnown RBP28.13■■■□□ 2.09
DKC1-208ENST00000475423 ZCCHC11Q5TAX3 1644 aaKnown RBP28.12■■■□□ 2.09
DKC1-208ENST00000475423 EPRSP07814 1512 aaKnown RBP28.12■■■□□ 2.09
DKC1-208ENST00000475423 GOLGA3Q08378 1498 aa28.1■■■□□ 2.09
DKC1-208ENST00000475423 MAP3K4Q9Y6R4 1608 aa28.05■■■□□ 2.08
DKC1-208ENST00000475423 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
DKC1-208ENST00000475423 ABCA8O94911 1581 aa28.01■■■□□ 2.07
DKC1-208ENST00000475423 WDR7Q9Y4E6 1490 aa28■■■□□ 2.07
DKC1-208ENST00000475423 COL17A1Q9UMD9 1497 aaPredicted RBP27.97■■■□□ 2.07
DKC1-208ENST00000475423 TEX14Q8IWB6 1497 aa27.96■■■□□ 2.07
DKC1-208ENST00000475423 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
DKC1-208ENST00000475423 MAGI3Q5TCQ9 1506 aa27.84■■■□□ 2.05
DKC1-208ENST00000475423 KCNH8Q96L42 1107 aa27.84■■■□□ 2.05
DKC1-208ENST00000475423 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
DKC1-208ENST00000475423 P3H3Q8IVL6 736 aa27.83■■■□□ 2.05
DKC1-208ENST00000475423 CFAP43Q8NDM7 1665 aa27.83■■■□□ 2.05
DKC1-208ENST00000475423 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
DKC1-208ENST00000475423 EEA1Q15075 1411 aa27.81■■■□□ 2.04
DKC1-208ENST00000475423 SAMD9Q5K651 1589 aa27.81■■■□□ 2.04
DKC1-208ENST00000475423 ATP10BO94823 1461 aa27.79■■■□□ 2.04
DKC1-208ENST00000475423 ADGRL1O94910 1474 aa27.76■■■□□ 2.03
DKC1-208ENST00000475423 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
DKC1-208ENST00000475423 RAPGEF6Q8TEU7 1601 aa27.68■■■□□ 2.02
DKC1-208ENST00000475423 ABCA9Q8IUA7 1624 aa27.63■■■□□ 2.01
DKC1-208ENST00000475423 ARAP3Q8WWN8 1544 aa27.63■■■□□ 2.01
DKC1-208ENST00000475423 NUP153P49790 1475 aaKnown RBP27.6■■■□□ 2.01
DKC1-208ENST00000475423 FHOD3Q2V2M9 1422 aa27.58■■■□□ 2.01
DKC1-208ENST00000475423 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
DKC1-208ENST00000475423 KIF21BO75037 1637 aa27.58■■■□□ 2.01
DKC1-208ENST00000475423 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
DKC1-208ENST00000475423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
DKC1-208ENST00000475423 HNRNPUL2Q1KMD3 747 aaKnown RBP27.55■■■□□ 2
DKC1-208ENST00000475423 EFCAB5A4FU69 1503 aa27.51■■■□□ 2
DKC1-208ENST00000475423 NEO1Q92859 1461 aa27.5■■□□□ 1.99
DKC1-208ENST00000475423 PLEKHD1A6NEE1 506 aa27.46■■□□□ 1.99
DKC1-208ENST00000475423 RAPGEF3O95398 923 aa27.43■■□□□ 1.98
DKC1-208ENST00000475423 HECW2Q9P2P5 1572 aa27.37■■□□□ 1.97
DKC1-208ENST00000475423 FRMPD1Q5SYB0 1578 aa27.36■■□□□ 1.97
DKC1-208ENST00000475423 UBTFP17480 764 aaKnown RBP27.35■■□□□ 1.97
DKC1-208ENST00000475423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.35■■□□□ 1.97
DKC1-208ENST00000475423 AKNAQ7Z591 1439 aa27.3■■□□□ 1.96
DKC1-208ENST00000475423 FANCAO15360 1455 aa27.3■■□□□ 1.96
DKC1-208ENST00000475423 CDK13Q14004 1512 aaKnown RBP27.3■■□□□ 1.96
DKC1-208ENST00000475423 EHMT2Q96KQ7 1210 aa27.29■■□□□ 1.96
DKC1-208ENST00000475423 DENND4BO75064 1496 aaPredicted RBP27.29■■□□□ 1.96
DKC1-208ENST00000475423 ADAMTSL3P82987 1691 aa27.29■■□□□ 1.96
DKC1-208ENST00000475423 TTC37Q6PGP7 1564 aa27.28■■□□□ 1.96
DKC1-208ENST00000475423 ARHGAP35Q9NRY4 1499 aa27.28■■□□□ 1.96
DKC1-208ENST00000475423 FMN1Q68DA7 1419 aa27.28■■□□□ 1.96
DKC1-208ENST00000475423 RICTORQ6R327 1708 aa27.27■■□□□ 1.96
DKC1-208ENST00000475423 CFAP74Q9C0B2 1584 aa27.27■■□□□ 1.96
DKC1-208ENST00000475423 PTPRMP28827 1452 aa27.22■■□□□ 1.95
DKC1-208ENST00000475423 BCORL1Q5H9F3 1711 aa27.21■■□□□ 1.95
DKC1-208ENST00000475423 HECW1Q76N89 1606 aa27.21■■□□□ 1.95
DKC1-208ENST00000475423 ARHGEF40Q8TER5 1519 aa27.21■■□□□ 1.95
DKC1-208ENST00000475423 PLCH2O75038 1416 aa27.2■■□□□ 1.94
DKC1-208ENST00000475423 ZMYM4Q5VZL5 1548 aa27.18■■□□□ 1.94
DKC1-208ENST00000475423 ATP1B4Q9UN42 357 aaPredicted RBP27.18■■□□□ 1.94
DKC1-208ENST00000475423 ARID4BQ4LE39 1312 aaPredicted RBP27.17■■□□□ 1.94
DKC1-208ENST00000475423 CDK11AQ9UQ88 783 aaPredicted RBP27.15■■□□□ 1.94
DKC1-208ENST00000475423 ILDR1Q86SU0 546 aaPredicted RBP27.14■■□□□ 1.94
DKC1-208ENST00000475423 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
DKC1-208ENST00000475423 MAGI2Q86UL8 1455 aa27.13■■□□□ 1.93
DKC1-208ENST00000475423 SCAPERQ9BY12 1400 aa27.11■■□□□ 1.93
DKC1-208ENST00000475423 YEATS2Q9ULM3 1422 aa27.1■■□□□ 1.93
DKC1-208ENST00000475423 ZFYVE16Q7Z3T8 1539 aa27.1■■□□□ 1.93
DKC1-208ENST00000475423 TROQ12816 1431 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms