RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
GPM6B-208ENST00000475307 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
GPM6B-208ENST00000475307 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
GPM6B-208ENST00000475307 KIAA0586Q9BVV6 1533 aa19.57■□□□□ 0.72
GPM6B-208ENST00000475307 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
GPM6B-208ENST00000475307 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
GPM6B-208ENST00000475307 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
GPM6B-208ENST00000475307 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
GPM6B-208ENST00000475307 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
GPM6B-208ENST00000475307 PTPRGP23470 1445 aa19.36■□□□□ 0.69
GPM6B-208ENST00000475307 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
GPM6B-208ENST00000475307 ADCY10Q96PN6 1610 aa19.32■□□□□ 0.68
GPM6B-208ENST00000475307 PRXQ9BXM0 1461 aa19.31■□□□□ 0.68
GPM6B-208ENST00000475307 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
GPM6B-208ENST00000475307 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
GPM6B-208ENST00000475307 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.68
GPM6B-208ENST00000475307 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
GPM6B-208ENST00000475307 FAM69CQ0P6D2 419 aa19.25■□□□□ 0.67
GPM6B-208ENST00000475307 CTTNBP2Q8WZ74 1663 aa19.23■□□□□ 0.67
GPM6B-208ENST00000475307 ABCC10Q5T3U5 1492 aa19.22■□□□□ 0.67
GPM6B-208ENST00000475307 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
GPM6B-208ENST00000475307 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
GPM6B-208ENST00000475307 EEA1Q15075 1411 aa19.21■□□□□ 0.67
GPM6B-208ENST00000475307 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
GPM6B-208ENST00000475307 KIF13AQ9H1H9 1805 aa19.19■□□□□ 0.66
GPM6B-208ENST00000475307 FAM9AQ8IZU1 332 aaPredicted RBP19.19■□□□□ 0.66
GPM6B-208ENST00000475307 UHRF1BP1LA0JNW5 1464 aa19.19■□□□□ 0.66
GPM6B-208ENST00000475307 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
GPM6B-208ENST00000475307 DIP2BQ9P265 1576 aa19.16■□□□□ 0.66
GPM6B-208ENST00000475307 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
GPM6B-208ENST00000475307 ASXL2Q76L83 1435 aa19.12■□□□□ 0.65
GPM6B-208ENST00000475307 PLB1Q6P1J6 1458 aa19.11■□□□□ 0.65
GPM6B-208ENST00000475307 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
GPM6B-208ENST00000475307 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
GPM6B-208ENST00000475307 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
GPM6B-208ENST00000475307 ZCCHC11Q5TAX3 1644 aaKnown RBP19.04■□□□□ 0.64
GPM6B-208ENST00000475307 ABCA8O94911 1581 aa19.02■□□□□ 0.64
GPM6B-208ENST00000475307 GLI2P10070 1586 aa19.01■□□□□ 0.63
GPM6B-208ENST00000475307 KIF21BO75037 1637 aa19■□□□□ 0.63
GPM6B-208ENST00000475307 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
GPM6B-208ENST00000475307 TSPOAP1O95153 1857 aa18.99■□□□□ 0.63
GPM6B-208ENST00000475307 SAMD9Q5K651 1589 aa18.98■□□□□ 0.63
GPM6B-208ENST00000475307 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
GPM6B-208ENST00000475307 WDR7Q9Y4E6 1490 aa18.97■□□□□ 0.63
GPM6B-208ENST00000475307 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
GPM6B-208ENST00000475307 KDM6BO15054 1643 aa18.96■□□□□ 0.63
GPM6B-208ENST00000475307 UBTFP17480 764 aaKnown RBP18.94■□□□□ 0.62
GPM6B-208ENST00000475307 KCNH8Q96L42 1107 aa18.94■□□□□ 0.62
GPM6B-208ENST00000475307 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
GPM6B-208ENST00000475307 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
GPM6B-208ENST00000475307 ATP10BO94823 1461 aa18.9■□□□□ 0.62
GPM6B-208ENST00000475307 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.62
GPM6B-208ENST00000475307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
GPM6B-208ENST00000475307 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
GPM6B-208ENST00000475307 PPRC1Q5VV67 1664 aaKnown RBP18.89■□□□□ 0.61
GPM6B-208ENST00000475307 TEX14Q8IWB6 1497 aa18.88■□□□□ 0.61
GPM6B-208ENST00000475307 RAPGEF6Q8TEU7 1601 aa18.88■□□□□ 0.61
GPM6B-208ENST00000475307 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
GPM6B-208ENST00000475307 CD109Q6YHK3 1445 aa18.84■□□□□ 0.61
GPM6B-208ENST00000475307 NUP153P49790 1475 aaKnown RBP18.82■□□□□ 0.6
GPM6B-208ENST00000475307 CFAP43Q8NDM7 1665 aa18.8■□□□□ 0.6
GPM6B-208ENST00000475307 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
GPM6B-208ENST00000475307 COL17A1Q9UMD9 1497 aaPredicted RBP18.79■□□□□ 0.6
GPM6B-208ENST00000475307 PLEKHD1A6NEE1 506 aa18.76■□□□□ 0.59
GPM6B-208ENST00000475307 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
GPM6B-208ENST00000475307 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
GPM6B-208ENST00000475307 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
GPM6B-208ENST00000475307 ABCA9Q8IUA7 1624 aa18.71■□□□□ 0.58
GPM6B-208ENST00000475307 KDM4FA0A1W2PPD8 638 aa18.67■□□□□ 0.58
GPM6B-208ENST00000475307 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
GPM6B-208ENST00000475307 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
GPM6B-208ENST00000475307 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
GPM6B-208ENST00000475307 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.57
GPM6B-208ENST00000475307 CDK11AQ9UQ88 783 aaPredicted RBP18.62■□□□□ 0.57
GPM6B-208ENST00000475307 NEO1Q92859 1461 aa18.62■□□□□ 0.57
GPM6B-208ENST00000475307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
GPM6B-208ENST00000475307 RAPGEF3O95398 923 aa18.58■□□□□ 0.56
GPM6B-208ENST00000475307 ADGRL1O94910 1474 aa18.58■□□□□ 0.56
GPM6B-208ENST00000475307 CLIP1P30622 1438 aa18.57■□□□□ 0.56
GPM6B-208ENST00000475307 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
GPM6B-208ENST00000475307 FANCAO15360 1455 aa18.54■□□□□ 0.56
GPM6B-208ENST00000475307 AKNAQ7Z591 1439 aa18.54■□□□□ 0.56
GPM6B-208ENST00000475307 CASKIN1Q8WXD9 1431 aa18.54■□□□□ 0.56
GPM6B-208ENST00000475307 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.56
GPM6B-208ENST00000475307 TROQ12816 1431 aaPredicted RBP18.52■□□□□ 0.56
GPM6B-208ENST00000475307 DENND4BO75064 1496 aaPredicted RBP18.51■□□□□ 0.55
GPM6B-208ENST00000475307 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
GPM6B-208ENST00000475307 PLCH2O75038 1416 aa18.5■□□□□ 0.55
GPM6B-208ENST00000475307 CCDC18Q5T9S5 1454 aa18.5■□□□□ 0.55
GPM6B-208ENST00000475307 KIF14Q15058 1648 aa18.48■□□□□ 0.55
GPM6B-208ENST00000475307 FRMPD1Q5SYB0 1578 aa18.47■□□□□ 0.55
GPM6B-208ENST00000475307 LRRIQ1Q96JM4 1722 aa18.47■□□□□ 0.55
GPM6B-208ENST00000475307 EFCAB2Q5VUJ9 269 aa18.47■□□□□ 0.55
GPM6B-208ENST00000475307 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.55
GPM6B-208ENST00000475307 SCAPERQ9BY12 1400 aa18.44■□□□□ 0.54
GPM6B-208ENST00000475307 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
GPM6B-208ENST00000475307 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
GPM6B-208ENST00000475307 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
GPM6B-208ENST00000475307 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
GPM6B-208ENST00000475307 RICTORQ6R327 1708 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms