RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 KIF13AQ9H1H9 1805 aa31.56■■■□□ 2.64
PCGF3-209ENST00000475288 CUL7Q14999 1698 aa31.5■■■□□ 2.63
PCGF3-209ENST00000475288 KIAA0586Q9BVV6 1533 aa31.49■■■□□ 2.63
PCGF3-209ENST00000475288 IGF1RP08069 1367 aa31.48■■■□□ 2.63
PCGF3-209ENST00000475288 KIF27Q86VH2 1401 aa31.48■■■□□ 2.63
PCGF3-209ENST00000475288 MAPKBP1O60336 1514 aa31.45■■■□□ 2.63
PCGF3-209ENST00000475288 ABCC10Q5T3U5 1492 aa31.41■■■□□ 2.62
PCGF3-209ENST00000475288 ADCY10Q96PN6 1610 aa31.39■■■□□ 2.62
PCGF3-209ENST00000475288 NPM1P06748 294 aaKnown RBP eCLIP31.37■■■□□ 2.61
PCGF3-209ENST00000475288 DIP2BQ9P265 1576 aa31.32■■■□□ 2.6
PCGF3-209ENST00000475288 FAM69CQ0P6D2 419 aa31.29■■■□□ 2.6
PCGF3-209ENST00000475288 CARMIL1Q5VZK9 1371 aa31.25■■■□□ 2.59
PCGF3-209ENST00000475288 PTPRGP23470 1445 aa31.17■■■□□ 2.58
PCGF3-209ENST00000475288 CARMIL2Q6F5E8 1435 aa31.15■■■□□ 2.58
PCGF3-209ENST00000475288 IQGAP2Q13576 1575 aa31.13■■■□□ 2.57
PCGF3-209ENST00000475288 TNIKQ9UKE5 1360 aa31.13■■■□□ 2.57
PCGF3-209ENST00000475288 ABCC2Q92887 1545 aa31.09■■■□□ 2.57
PCGF3-209ENST00000475288 KDM6BO15054 1643 aa31.09■■■□□ 2.57
PCGF3-209ENST00000475288 UHRF1BP1LA0JNW5 1464 aa31.05■■■□□ 2.56
PCGF3-209ENST00000475288 PLB1Q6P1J6 1458 aa31■■■□□ 2.55
PCGF3-209ENST00000475288 TSPOAP1O95153 1857 aa30.99■■■□□ 2.55
PCGF3-209ENST00000475288 DISP1Q96F81 1524 aa30.99■■■□□ 2.55
PCGF3-209ENST00000475288 GLI2P10070 1586 aa30.99■■■□□ 2.55
PCGF3-209ENST00000475288 RAPGEF2Q9Y4G8 1499 aa30.97■■■□□ 2.55
PCGF3-209ENST00000475288 UGGT2Q9NYU1 1516 aa30.97■■■□□ 2.55
PCGF3-209ENST00000475288 ASXL2Q76L83 1435 aa30.96■■■□□ 2.55
PCGF3-209ENST00000475288 UACAQ9BZF9 1416 aa30.96■■■□□ 2.55
PCGF3-209ENST00000475288 KDM5BQ9UGL1 1544 aa30.89■■■□□ 2.54
PCGF3-209ENST00000475288 TTBK1Q5TCY1 1321 aaPredicted RBP30.89■■■□□ 2.54
PCGF3-209ENST00000475288 PPRC1Q5VV67 1664 aaKnown RBP30.88■■■□□ 2.53
PCGF3-209ENST00000475288 KIAA0556O60303 1618 aa30.86■■■□□ 2.53
PCGF3-209ENST00000475288 KDM4FA0A1W2PPD8 638 aa30.8■■■□□ 2.52
PCGF3-209ENST00000475288 EPRSP07814 1512 aaKnown RBP30.79■■■□□ 2.52
PCGF3-209ENST00000475288 MAP3K4Q9Y6R4 1608 aa30.79■■■□□ 2.52
PCGF3-209ENST00000475288 ZCCHC11Q5TAX3 1644 aaKnown RBP30.78■■■□□ 2.52
PCGF3-209ENST00000475288 CTTNBP2Q8WZ74 1663 aa30.75■■■□□ 2.51
PCGF3-209ENST00000475288 TEX14Q8IWB6 1497 aa30.71■■■□□ 2.51
PCGF3-209ENST00000475288 GOLGA3Q08378 1498 aa30.69■■■□□ 2.5
PCGF3-209ENST00000475288 WDR7Q9Y4E6 1490 aa30.65■■■□□ 2.5
PCGF3-209ENST00000475288 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
PCGF3-209ENST00000475288 COL17A1Q9UMD9 1497 aaPredicted RBP30.63■■■□□ 2.49
PCGF3-209ENST00000475288 ABCA8O94911 1581 aa30.61■■■□□ 2.49
PCGF3-209ENST00000475288 ADGRL1O94910 1474 aa30.55■■■□□ 2.48
PCGF3-209ENST00000475288 CFAP43Q8NDM7 1665 aa30.53■■■□□ 2.48
PCGF3-209ENST00000475288 MAGI3Q5TCQ9 1506 aa30.52■■■□□ 2.48
PCGF3-209ENST00000475288 CD109Q6YHK3 1445 aa30.46■■■□□ 2.47
PCGF3-209ENST00000475288 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
PCGF3-209ENST00000475288 KCNH8Q96L42 1107 aa30.34■■■□□ 2.45
PCGF3-209ENST00000475288 SAMD9Q5K651 1589 aa30.32■■■□□ 2.45
PCGF3-209ENST00000475288 ATP10BO94823 1461 aa30.31■■■□□ 2.44
PCGF3-209ENST00000475288 ARAP3Q8WWN8 1544 aa30.29■■■□□ 2.44
PCGF3-209ENST00000475288 CSRNP3Q8WYN3 585 aa30.26■■■□□ 2.43
PCGF3-209ENST00000475288 ABCA9Q8IUA7 1624 aa30.25■■■□□ 2.43
PCGF3-209ENST00000475288 PHLDB1Q86UU1 1377 aa30.24■■■□□ 2.43
PCGF3-209ENST00000475288 RAPGEF6Q8TEU7 1601 aa30.22■■■□□ 2.43
PCGF3-209ENST00000475288 EEA1Q15075 1411 aa30.21■■■□□ 2.43
PCGF3-209ENST00000475288 HECW2Q9P2P5 1572 aa30.2■■■□□ 2.43
PCGF3-209ENST00000475288 P3H3Q8IVL6 736 aa30.19■■■□□ 2.42
PCGF3-209ENST00000475288 ILDR1Q86SU0 546 aaPredicted RBP30.17■■■□□ 2.42
PCGF3-209ENST00000475288 KIF21BO75037 1637 aa30.14■■■□□ 2.42
PCGF3-209ENST00000475288 NEO1Q92859 1461 aa30.12■■■□□ 2.41
PCGF3-209ENST00000475288 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
PCGF3-209ENST00000475288 NUP153P49790 1475 aaKnown RBP30.1■■■□□ 2.41
PCGF3-209ENST00000475288 FHOD3Q2V2M9 1422 aa30■■■□□ 2.39
PCGF3-209ENST00000475288 EFCAB5A4FU69 1503 aa30■■■□□ 2.39
PCGF3-209ENST00000475288 FRMPD1Q5SYB0 1578 aa29.99■■■□□ 2.39
PCGF3-209ENST00000475288 ADAMTSL3P82987 1691 aa29.98■■■□□ 2.39
PCGF3-209ENST00000475288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
PCGF3-209ENST00000475288 HNRNPUL2Q1KMD3 747 aaKnown RBP29.97■■■□□ 2.39
PCGF3-209ENST00000475288 RAPGEF3O95398 923 aa29.96■■■□□ 2.39
PCGF3-209ENST00000475288 CFAP74Q9C0B2 1584 aa29.91■■■□□ 2.38
PCGF3-209ENST00000475288 PLEKHD1A6NEE1 506 aa29.9■■■□□ 2.38
PCGF3-209ENST00000475288 PTPRMP28827 1452 aa29.9■■■□□ 2.38
PCGF3-209ENST00000475288 BCORL1Q5H9F3 1711 aa29.89■■■□□ 2.38
PCGF3-209ENST00000475288 ARHGEF40Q8TER5 1519 aa29.87■■■□□ 2.37
PCGF3-209ENST00000475288 RICTORQ6R327 1708 aa29.87■■■□□ 2.37
PCGF3-209ENST00000475288 DENND4BO75064 1496 aaPredicted RBP29.87■■■□□ 2.37
PCGF3-209ENST00000475288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.86■■■□□ 2.373e-6■■■■□ 24.5
PCGF3-209ENST00000475288 AKNAQ7Z591 1439 aa29.84■■■□□ 2.37
PCGF3-209ENST00000475288 FANCAO15360 1455 aa29.84■■■□□ 2.37
PCGF3-209ENST00000475288 RANGAP1P46060 587 aaPredicted RBP29.83■■■□□ 2.37
PCGF3-209ENST00000475288 ZMYM4Q5VZL5 1548 aa29.81■■■□□ 2.36
PCGF3-209ENST00000475288 TTC37Q6PGP7 1564 aa29.8■■■□□ 2.36
PCGF3-209ENST00000475288 MADDQ8WXG6 1647 aa29.79■■■□□ 2.36
PCGF3-209ENST00000475288 MAGI2Q86UL8 1455 aa29.74■■■□□ 2.35
PCGF3-209ENST00000475288 ARID4BQ4LE39 1312 aaPredicted RBP29.73■■■□□ 2.35
PCGF3-209ENST00000475288 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
PCGF3-209ENST00000475288 FMN1Q68DA7 1419 aa29.71■■■□□ 2.35
PCGF3-209ENST00000475288 PCF11O94913 1555 aaKnown RBP29.69■■■□□ 2.34
PCGF3-209ENST00000475288 ZFYVE16Q7Z3T8 1539 aa29.69■■■□□ 2.34
PCGF3-209ENST00000475288 PLCH2O75038 1416 aa29.69■■■□□ 2.34
PCGF3-209ENST00000475288 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
PCGF3-209ENST00000475288 POGZQ7Z3K3 1410 aa29.67■■■□□ 2.34
PCGF3-209ENST00000475288 LMTK3Q96Q04 1460 aa29.66■■■□□ 2.34
PCGF3-209ENST00000475288 RIMS1Q86UR5 1692 aaKnown RBP29.66■■■□□ 2.34
PCGF3-209ENST00000475288 ARHGAP35Q9NRY4 1499 aa29.62■■■□□ 2.33
PCGF3-209ENST00000475288 YEATS2Q9ULM3 1422 aa29.62■■■□□ 2.33
PCGF3-209ENST00000475288 SIGLEC1Q9BZZ2 1709 aa29.6■■■□□ 2.33
PCGF3-209ENST00000475288 SCAPERQ9BY12 1400 aa29.6■■■□□ 2.33
PCGF3-209ENST00000475288 MYO5CQ9NQX4 1742 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms