RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 ERCC6L2Q5T890 1561 aa23.41■■□□□ 1.34
FRMD4A-204ENST00000475141 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
FRMD4A-204ENST00000475141 ERICH3Q5RHP9 1530 aa23.37■■□□□ 1.33
FRMD4A-204ENST00000475141 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
FRMD4A-204ENST00000475141 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
FRMD4A-204ENST00000475141 EEA1Q15075 1411 aa23.32■■□□□ 1.32
FRMD4A-204ENST00000475141 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
FRMD4A-204ENST00000475141 NUP160Q12769 1436 aa23.3■■□□□ 1.32
FRMD4A-204ENST00000475141 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
FRMD4A-204ENST00000475141 CUL7Q14999 1698 aa23.27■■□□□ 1.32
FRMD4A-204ENST00000475141 IGF1RP08069 1367 aa23.26■■□□□ 1.31
FRMD4A-204ENST00000475141 SCAF1Q9H7N4 1312 aaKnown RBP23.22■■□□□ 1.31
FRMD4A-204ENST00000475141 SHROOM2Q13796 1616 aa23.21■■□□□ 1.31
FRMD4A-204ENST00000475141 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
FRMD4A-204ENST00000475141 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
FRMD4A-204ENST00000475141 CSRNP3Q8WYN3 585 aa23.16■■□□□ 1.3
FRMD4A-204ENST00000475141 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
FRMD4A-204ENST00000475141 JPH4Q96JJ6 628 aa23.15■■□□□ 1.3
FRMD4A-204ENST00000475141 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
FRMD4A-204ENST00000475141 PRXQ9BXM0 1461 aa23.09■■□□□ 1.29
FRMD4A-204ENST00000475141 KIF13AQ9H1H9 1805 aa23.07■■□□□ 1.28
FRMD4A-204ENST00000475141 KIF21BO75037 1637 aa23.04■■□□□ 1.28
FRMD4A-204ENST00000475141 MAPK8IP2Q13387 824 aaPredicted RBP23.01■■□□□ 1.27
FRMD4A-204ENST00000475141 NPM1P06748 294 aaKnown RBP eCLIP22.99■■□□□ 1.27
FRMD4A-204ENST00000475141 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
FRMD4A-204ENST00000475141 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
FRMD4A-204ENST00000475141 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
FRMD4A-204ENST00000475141 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
FRMD4A-204ENST00000475141 CTTNBP2Q8WZ74 1663 aa22.9■■□□□ 1.26
FRMD4A-204ENST00000475141 KIAA0586Q9BVV6 1533 aa22.88■■□□□ 1.25
FRMD4A-204ENST00000475141 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
FRMD4A-204ENST00000475141 EHMT2Q96KQ7 1210 aa22.87■■□□□ 1.25
FRMD4A-204ENST00000475141 PPP4R3CPQ6ZMV5 832 aa22.86■■□□□ 1.25
FRMD4A-204ENST00000475141 MAPKBP1O60336 1514 aa22.85■■□□□ 1.25
FRMD4A-204ENST00000475141 IQGAP2Q13576 1575 aa22.84■■□□□ 1.25
FRMD4A-204ENST00000475141 DIP2BQ9P265 1576 aa22.84■■□□□ 1.25
FRMD4A-204ENST00000475141 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
FRMD4A-204ENST00000475141 DMRT2Q9Y5R5 561 aa22.82■■□□□ 1.24
FRMD4A-204ENST00000475141 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
FRMD4A-204ENST00000475141 PTPRGP23470 1445 aa22.76■■□□□ 1.23
FRMD4A-204ENST00000475141 KDM6BO15054 1643 aa22.72■■□□□ 1.23
FRMD4A-204ENST00000475141 UGGT2Q9NYU1 1516 aa22.7■■□□□ 1.22
FRMD4A-204ENST00000475141 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
FRMD4A-204ENST00000475141 CARMIL2Q6F5E8 1435 aa22.67■■□□□ 1.22
FRMD4A-204ENST00000475141 KDM4FA0A1W2PPD8 638 aa22.66■■□□□ 1.22
FRMD4A-204ENST00000475141 LOC105371045A0A1W2PR82 267 aa22.65■■□□□ 1.22
FRMD4A-204ENST00000475141 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
FRMD4A-204ENST00000475141 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
FRMD4A-204ENST00000475141 KIAA0556O60303 1618 aa22.61■■□□□ 1.21
FRMD4A-204ENST00000475141 ASXL2Q76L83 1435 aa22.61■■□□□ 1.21
FRMD4A-204ENST00000475141 EFCAB5A4FU69 1503 aa22.61■■□□□ 1.21
FRMD4A-204ENST00000475141 DISP1Q96F81 1524 aa22.59■■□□□ 1.21
FRMD4A-204ENST00000475141 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
FRMD4A-204ENST00000475141 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
FRMD4A-204ENST00000475141 PLB1Q6P1J6 1458 aa22.55■■□□□ 1.2
FRMD4A-204ENST00000475141 PPRC1Q5VV67 1664 aaKnown RBP22.53■■□□□ 1.2
FRMD4A-204ENST00000475141 UHRF1BP1LA0JNW5 1464 aa22.53■■□□□ 1.2
FRMD4A-204ENST00000475141 CLIP1P30622 1438 aa22.52■■□□□ 1.2
FRMD4A-204ENST00000475141 CEP162Q5TB80 1403 aa22.52■■□□□ 1.2
FRMD4A-204ENST00000475141 GLI2P10070 1586 aa22.5■■□□□ 1.19
FRMD4A-204ENST00000475141 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
FRMD4A-204ENST00000475141 P3H3Q8IVL6 736 aa22.48■■□□□ 1.19
FRMD4A-204ENST00000475141 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
FRMD4A-204ENST00000475141 EPRSP07814 1512 aaKnown RBP22.45■■□□□ 1.18
FRMD4A-204ENST00000475141 KDM5BQ9UGL1 1544 aa22.45■■□□□ 1.18
FRMD4A-204ENST00000475141 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
FRMD4A-204ENST00000475141 COL17A1Q9UMD9 1497 aaPredicted RBP22.43■■□□□ 1.18
FRMD4A-204ENST00000475141 MAP3K4Q9Y6R4 1608 aa22.41■■□□□ 1.18
FRMD4A-204ENST00000475141 ADGRL1O94910 1474 aa22.38■■□□□ 1.17
FRMD4A-204ENST00000475141 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
FRMD4A-204ENST00000475141 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
FRMD4A-204ENST00000475141 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
FRMD4A-204ENST00000475141 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
FRMD4A-204ENST00000475141 WDR7Q9Y4E6 1490 aa22.32■■□□□ 1.16
FRMD4A-204ENST00000475141 ABCA8O94911 1581 aa22.31■■□□□ 1.16
FRMD4A-204ENST00000475141 RAPGEF6Q8TEU7 1601 aa22.31■■□□□ 1.16
FRMD4A-204ENST00000475141 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
FRMD4A-204ENST00000475141 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
FRMD4A-204ENST00000475141 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
FRMD4A-204ENST00000475141 CD109Q6YHK3 1445 aa22.24■■□□□ 1.15
FRMD4A-204ENST00000475141 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
FRMD4A-204ENST00000475141 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
FRMD4A-204ENST00000475141 ILDR1Q86SU0 546 aaPredicted RBP22.22■■□□□ 1.15
FRMD4A-204ENST00000475141 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
FRMD4A-204ENST00000475141 NCBP3Q53F19 620 aaKnown RBP22.2■■□□□ 1.14
FRMD4A-204ENST00000475141 ATP1B4Q9UN42 357 aaPredicted RBP22.2■■□□□ 1.14
FRMD4A-204ENST00000475141 CFAP43Q8NDM7 1665 aa22.2■■□□□ 1.14
FRMD4A-204ENST00000475141 NUP153P49790 1475 aaKnown RBP22.19■■□□□ 1.14
FRMD4A-204ENST00000475141 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
FRMD4A-204ENST00000475141 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
FRMD4A-204ENST00000475141 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.13
FRMD4A-204ENST00000475141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
FRMD4A-204ENST00000475141 HNRNPUL2Q1KMD3 747 aaKnown RBP22.12■■□□□ 1.13
FRMD4A-204ENST00000475141 ATP10BO94823 1461 aa22.11■■□□□ 1.13
FRMD4A-204ENST00000475141 DCAF8L1A6NGE4 600 aa22.1■■□□□ 1.13
FRMD4A-204ENST00000475141 CDK13Q14004 1512 aaKnown RBP22.09■■□□□ 1.13
FRMD4A-204ENST00000475141 LRRIQ1Q96JM4 1722 aa22.08■■□□□ 1.12
FRMD4A-204ENST00000475141 HOXD11P31277 338 aaPredicted RBP22.07■■□□□ 1.12
FRMD4A-204ENST00000475141 RNF216Q9NWF9 866 aaPredicted RBP22.06■■□□□ 1.12
FRMD4A-204ENST00000475141 APLP2Q06481 763 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms