RNA–Protein interactions for RNA: ENST00000475051.4

TRIM29-202, Transcript of tripartite motif containing 29, humanhuman

TSL 5

Gene TRIM29, Length 1,702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-202ENST00000475051 MAGI1Q96QZ7 1491 aaPredicted RBP25.42■■□□□ 1.66
TRIM29-202ENST00000475051 EFCAB5A4FU69 1503 aa25.36■■□□□ 1.65
TRIM29-202ENST00000475051 TRIM26Q12899 539 aaPredicted RBP25.34■■□□□ 1.65
TRIM29-202ENST00000475051 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
TRIM29-202ENST00000475051 SYNJ2O15056 1496 aa25.32■■□□□ 1.64
TRIM29-202ENST00000475051 GRIN2AQ12879 1464 aa25.32■■□□□ 1.64
TRIM29-202ENST00000475051 PPARGC1BQ86YN6 1023 aaKnown RBP25.29■■□□□ 1.64
TRIM29-202ENST00000475051 IQGAP2Q13576 1575 aa25.27■■□□□ 1.64
TRIM29-202ENST00000475051 SAMD9Q5K651 1589 aa25.25■■□□□ 1.63
TRIM29-202ENST00000475051 APLP2Q06481 763 aa25.24■■□□□ 1.63
TRIM29-202ENST00000475051 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
TRIM29-202ENST00000475051 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.62
TRIM29-202ENST00000475051 FHOD3Q2V2M9 1422 aa25.2■■□□□ 1.62
TRIM29-202ENST00000475051 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
TRIM29-202ENST00000475051 FBLN2P98095 1184 aa25.17■■□□□ 1.62
TRIM29-202ENST00000475051 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
TRIM29-202ENST00000475051 UGGT2Q9NYU1 1516 aa25.13■■□□□ 1.61
TRIM29-202ENST00000475051 NUP160Q12769 1436 aa25.12■■□□□ 1.61
TRIM29-202ENST00000475051 TTBK1Q5TCY1 1321 aaPredicted RBP25.11■■□□□ 1.61
TRIM29-202ENST00000475051 FMN1Q68DA7 1419 aa25.11■■□□□ 1.61
TRIM29-202ENST00000475051 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
TRIM29-202ENST00000475051 CHD1O14646 1710 aa25.06■■□□□ 1.6
TRIM29-202ENST00000475051 FYCO1Q9BQS8 1478 aa25.06■■□□□ 1.6
TRIM29-202ENST00000475051 CASKIN1Q8WXD9 1431 aa25.05■■□□□ 1.6
TRIM29-202ENST00000475051 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
TRIM29-202ENST00000475051 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
TRIM29-202ENST00000475051 KIAA0556O60303 1618 aa25.01■■□□□ 1.59
TRIM29-202ENST00000475051 DISP1Q96F81 1524 aa25■■□□□ 1.59
TRIM29-202ENST00000475051 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
TRIM29-202ENST00000475051 KANK4Q5T7N3 995 aaPredicted RBP24.96■■□□□ 1.59
TRIM29-202ENST00000475051 ATP1B4Q9UN42 357 aaPredicted RBP24.94■■□□□ 1.58
TRIM29-202ENST00000475051 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
TRIM29-202ENST00000475051 CARMIL2Q6F5E8 1435 aa24.9■■□□□ 1.58
TRIM29-202ENST00000475051 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.57
TRIM29-202ENST00000475051 HECW1Q76N89 1606 aa24.87■■□□□ 1.57
TRIM29-202ENST00000475051 LRRIQ1Q96JM4 1722 aa24.86■■□□□ 1.57
TRIM29-202ENST00000475051 CCDC18Q5T9S5 1454 aa24.81■■□□□ 1.56
TRIM29-202ENST00000475051 SHROOM2Q13796 1616 aa24.8■■□□□ 1.56
TRIM29-202ENST00000475051 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
TRIM29-202ENST00000475051 RAPGEF6Q8TEU7 1601 aa24.77■■□□□ 1.56
TRIM29-202ENST00000475051 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
TRIM29-202ENST00000475051 EPRSP07814 1512 aaKnown RBP24.75■■□□□ 1.55
TRIM29-202ENST00000475051 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
TRIM29-202ENST00000475051 RRBP1Q9P2E9 1410 aaKnown RBP24.71■■□□□ 1.55
TRIM29-202ENST00000475051 EHBP1L1Q8N3D4 1523 aa24.69■■□□□ 1.54
TRIM29-202ENST00000475051 NUP153P49790 1475 aaKnown RBP24.69■■□□□ 1.54
TRIM29-202ENST00000475051 CDK13Q14004 1512 aaKnown RBP24.68■■□□□ 1.54
TRIM29-202ENST00000475051 PLB1Q6P1J6 1458 aa24.67■■□□□ 1.54
TRIM29-202ENST00000475051 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.53
TRIM29-202ENST00000475051 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.53
TRIM29-202ENST00000475051 ABCA8O94911 1581 aa24.63■■□□□ 1.53
TRIM29-202ENST00000475051 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
TRIM29-202ENST00000475051 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
TRIM29-202ENST00000475051 PTPRGP23470 1445 aa24.62■■□□□ 1.53
TRIM29-202ENST00000475051 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
TRIM29-202ENST00000475051 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
TRIM29-202ENST00000475051 ERCC6L2Q5T890 1561 aa24.59■■□□□ 1.53
TRIM29-202ENST00000475051 NCOA2Q15596 1464 aa24.58■■□□□ 1.53
TRIM29-202ENST00000475051 HRCP23327 699 aa24.58■■□□□ 1.52
TRIM29-202ENST00000475051 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.52
TRIM29-202ENST00000475051 CDK11AQ9UQ88 783 aaPredicted RBP24.54■■□□□ 1.52
TRIM29-202ENST00000475051 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
TRIM29-202ENST00000475051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
TRIM29-202ENST00000475051 MYOM3Q5VTT5 1437 aa24.49■■□□□ 1.51
TRIM29-202ENST00000475051 UACAQ9BZF9 1416 aa24.49■■□□□ 1.51
TRIM29-202ENST00000475051 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
TRIM29-202ENST00000475051 ATP10BO94823 1461 aa24.46■■□□□ 1.51
TRIM29-202ENST00000475051 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.45■■□□□ 1.51
TRIM29-202ENST00000475051 TROQ12816 1431 aaPredicted RBP24.45■■□□□ 1.5
TRIM29-202ENST00000475051 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
TRIM29-202ENST00000475051 ABCC2Q92887 1545 aa24.43■■□□□ 1.5
TRIM29-202ENST00000475051 ADCY10Q96PN6 1610 aa24.41■■□□□ 1.5
TRIM29-202ENST00000475051 DNAJC5Q9H3Z4 198 aa24.39■■□□□ 1.5
TRIM29-202ENST00000475051 ITGAEP38570 1179 aa24.38■■□□□ 1.49
TRIM29-202ENST00000475051 PTPN23Q9H3S7 1636 aa24.37■■□□□ 1.49
TRIM29-202ENST00000475051 PLEKHD1A6NEE1 506 aa24.37■■□□□ 1.49
TRIM29-202ENST00000475051 UHRF1BP1LA0JNW5 1464 aa24.36■■□□□ 1.49
TRIM29-202ENST00000475051 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
TRIM29-202ENST00000475051 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
TRIM29-202ENST00000475051 KIF14Q15058 1648 aa24.35■■□□□ 1.49
TRIM29-202ENST00000475051 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
TRIM29-202ENST00000475051 TCOF1Q13428 1488 aaKnown RBP24.32■■□□□ 1.48
TRIM29-202ENST00000475051 ITSN2Q9NZM3 1697 aa24.31■■□□□ 1.48
TRIM29-202ENST00000475051 ZCCHC11Q5TAX3 1644 aaKnown RBP24.26■■□□□ 1.47
TRIM29-202ENST00000475051 KDM5BQ9UGL1 1544 aa24.26■■□□□ 1.47
TRIM29-202ENST00000475051 GPATCH8Q9UKJ3 1502 aaKnown RBP24.24■■□□□ 1.47
TRIM29-202ENST00000475051 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
TRIM29-202ENST00000475051 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
TRIM29-202ENST00000475051 SETD5Q9C0A6 1442 aa24.19■■□□□ 1.46
TRIM29-202ENST00000475051 RIMBP3CA6NJZ7 1639 aa24.18■■□□□ 1.46
TRIM29-202ENST00000475051 RIMBP3BA6NNM3 1639 aa24.18■■□□□ 1.46
TRIM29-202ENST00000475051 RIMBP3Q9UFD9 1639 aa24.18■■□□□ 1.46
TRIM29-202ENST00000475051 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
TRIM29-202ENST00000475051 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
TRIM29-202ENST00000475051 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
TRIM29-202ENST00000475051 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.45
TRIM29-202ENST00000475051 DNMT1P26358 1616 aaKnown RBP24.13■■□□□ 1.45
TRIM29-202ENST00000475051 ZNF644Q9H582 1327 aaPredicted RBP24.11■■□□□ 1.45
TRIM29-202ENST00000475051 PREX2Q70Z35 1606 aa24.11■■□□□ 1.45
TRIM29-202ENST00000475051 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms