RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TNIKQ9UKE5 1360 aa32.64■■■□□ 2.82
SH3D21-202ENST00000474766 CUL7Q14999 1698 aa32.62■■■□□ 2.81
SH3D21-202ENST00000474766 CEP162Q5TB80 1403 aa32.57■■■□□ 2.8
SH3D21-202ENST00000474766 CLASP1Q7Z460 1538 aa32.55■■■□□ 2.8
SH3D21-202ENST00000474766 CEP170Q5SW79 1584 aa32.52■■■□□ 2.8
SH3D21-202ENST00000474766 CARMIL1Q5VZK9 1371 aa32.5■■■□□ 2.79
SH3D21-202ENST00000474766 NUP160Q12769 1436 aa32.49■■■□□ 2.79
SH3D21-202ENST00000474766 GOLGA3Q08378 1498 aa32.49■■■□□ 2.79
SH3D21-202ENST00000474766 MYT1Q01538 1121 aa32.4■■■□□ 2.78
SH3D21-202ENST00000474766 KIF21BO75037 1637 aa32.38■■■□□ 2.77
SH3D21-202ENST00000474766 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
SH3D21-202ENST00000474766 RIMBP3CA6NJZ7 1639 aa32.36■■■□□ 2.77
SH3D21-202ENST00000474766 RIMBP3BA6NNM3 1639 aa32.36■■■□□ 2.77
SH3D21-202ENST00000474766 RIMBP3Q9UFD9 1639 aa32.36■■■□□ 2.77
SH3D21-202ENST00000474766 UBTFP17480 764 aaKnown RBP32.35■■■□□ 2.77
SH3D21-202ENST00000474766 RAPGEF2Q9Y4G8 1499 aa32.34■■■□□ 2.77
SH3D21-202ENST00000474766 PRXQ9BXM0 1461 aa32.32■■■□□ 2.76
SH3D21-202ENST00000474766 SHROOM2Q13796 1616 aa32.26■■■□□ 2.75
SH3D21-202ENST00000474766 ACIN1Q9UKV3 1341 aaKnown RBP32.22■■■□□ 2.75
SH3D21-202ENST00000474766 KIAA0586Q9BVV6 1533 aa32.22■■■□□ 2.75
SH3D21-202ENST00000474766 ERCC6L2Q5T890 1561 aa32.17■■■□□ 2.74
SH3D21-202ENST00000474766 ARAP1Q96P48 1450 aa32.13■■■□□ 2.73
SH3D21-202ENST00000474766 JPH4Q96JJ6 628 aa32.12■■■□□ 2.73
SH3D21-202ENST00000474766 IQGAP2Q13576 1575 aa32.11■■■□□ 2.73
SH3D21-202ENST00000474766 CTTNBP2Q8WZ74 1663 aa32.1■■■□□ 2.73
SH3D21-202ENST00000474766 PRG4Q92954 1404 aaPredicted RBP32.08■■■□□ 2.73
SH3D21-202ENST00000474766 CLIP1P30622 1438 aa32.04■■■□□ 2.72
SH3D21-202ENST00000474766 CYB5RLQ6IPT4 315 aa32■■■□□ 2.71
SH3D21-202ENST00000474766 NEUROD1Q13562 356 aa31.97■■■□□ 2.71
SH3D21-202ENST00000474766 CENPBP07199 599 aaPredicted RBP31.95■■■□□ 2.71
SH3D21-202ENST00000474766 UGGT2Q9NYU1 1516 aa31.93■■■□□ 2.7
SH3D21-202ENST00000474766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.92■■■□□ 2.7
SH3D21-202ENST00000474766 VPS8Q8N3P4 1428 aa31.92■■■□□ 2.7
SH3D21-202ENST00000474766 TTBK1Q5TCY1 1321 aaPredicted RBP31.9■■■□□ 2.7
SH3D21-202ENST00000474766 DISP1Q96F81 1524 aa31.88■■■□□ 2.69
SH3D21-202ENST00000474766 CCER1Q8TC90 406 aaPredicted RBP31.87■■■□□ 2.69
SH3D21-202ENST00000474766 CARMIL2Q6F5E8 1435 aa31.82■■■□□ 2.69
SH3D21-202ENST00000474766 KIAA0556O60303 1618 aa31.81■■■□□ 2.68
SH3D21-202ENST00000474766 DIEXFQ68CQ4 756 aaKnown RBP31.8■■■□□ 2.68
SH3D21-202ENST00000474766 GTF3C3Q9Y5Q9 886 aa31.76■■■□□ 2.68
SH3D21-202ENST00000474766 PTPRGP23470 1445 aa31.69■■■□□ 2.66
SH3D21-202ENST00000474766 SAMD9Q5K651 1589 aa31.68■■■□□ 2.66
SH3D21-202ENST00000474766 RANGAP1P46060 587 aaPredicted RBP31.65■■■□□ 2.66
SH3D21-202ENST00000474766 ADCY10Q96PN6 1610 aa31.62■■■□□ 2.65
SH3D21-202ENST00000474766 APLP2Q06481 763 aa31.6■■■□□ 2.65
SH3D21-202ENST00000474766 P3H3Q8IVL6 736 aa31.58■■■□□ 2.65
SH3D21-202ENST00000474766 EFCAB5A4FU69 1503 aa31.53■■■□□ 2.64
SH3D21-202ENST00000474766 UACAQ9BZF9 1416 aa31.5■■■□□ 2.63
SH3D21-202ENST00000474766 ARHGAP35Q9NRY4 1499 aa31.5■■■□□ 2.63
SH3D21-202ENST00000474766 FHOD3Q2V2M9 1422 aa31.49■■■□□ 2.63
SH3D21-202ENST00000474766 PLB1Q6P1J6 1458 aa31.47■■■□□ 2.63
SH3D21-202ENST00000474766 ABCC2Q92887 1545 aa31.47■■■□□ 2.63
SH3D21-202ENST00000474766 UHRF1BP1LA0JNW5 1464 aa31.46■■■□□ 2.63
SH3D21-202ENST00000474766 ABCA8O94911 1581 aa31.44■■■□□ 2.62
SH3D21-202ENST00000474766 ZNF316A6NFI3 1004 aaPredicted RBP31.38■■■□□ 2.61
SH3D21-202ENST00000474766 HNRNPUL2Q1KMD3 747 aaKnown RBP31.37■■■□□ 2.61
SH3D21-202ENST00000474766 NPM1P06748 294 aaKnown RBP eCLIP31.34■■■□□ 2.61
SH3D21-202ENST00000474766 KDM5BQ9UGL1 1544 aa31.33■■■□□ 2.61
SH3D21-202ENST00000474766 MAPKBP1O60336 1514 aa31.33■■■□□ 2.61
SH3D21-202ENST00000474766 RAPGEF6Q8TEU7 1601 aa31.32■■■□□ 2.6
SH3D21-202ENST00000474766 ZCCHC11Q5TAX3 1644 aaKnown RBP31.32■■■□□ 2.6
SH3D21-202ENST00000474766 KANK4Q5T7N3 995 aaPredicted RBP31.26■■■□□ 2.59
SH3D21-202ENST00000474766 TRHP20396 242 aaPredicted RBP31.24■■■□□ 2.59
SH3D21-202ENST00000474766 NUP153P49790 1475 aaKnown RBP31.21■■■□□ 2.59
SH3D21-202ENST00000474766 FMN1Q68DA7 1419 aa31.2■■■□□ 2.59
SH3D21-202ENST00000474766 KIF13AQ9H1H9 1805 aa31.2■■■□□ 2.58
SH3D21-202ENST00000474766 ASXL2Q76L83 1435 aa31.19■■■□□ 2.58
SH3D21-202ENST00000474766 ARID3CA6NKF2 412 aa31.19■■■□□ 2.58
SH3D21-202ENST00000474766 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
SH3D21-202ENST00000474766 ATP10BO94823 1461 aa31.17■■■□□ 2.58
SH3D21-202ENST00000474766 DIP2BQ9P265 1576 aa31.15■■■□□ 2.58
SH3D21-202ENST00000474766 ABCC10Q5T3U5 1492 aa31.14■■■□□ 2.58
SH3D21-202ENST00000474766 MAP3K1Q13233 1512 aa31.12■■■□□ 2.57
SH3D21-202ENST00000474766 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
SH3D21-202ENST00000474766 HECW1Q76N89 1606 aa31.08■■■□□ 2.57
SH3D21-202ENST00000474766 WDR7Q9Y4E6 1490 aa31.07■■■□□ 2.56
SH3D21-202ENST00000474766 LRRIQ1Q96JM4 1722 aa31.05■■■□□ 2.56
SH3D21-202ENST00000474766 CDK13Q14004 1512 aaKnown RBP31.04■■■□□ 2.56
SH3D21-202ENST00000474766 CASKIN1Q8WXD9 1431 aa31.04■■■□□ 2.56
SH3D21-202ENST00000474766 FAM69CQ0P6D2 419 aa31.03■■■□□ 2.56
SH3D21-202ENST00000474766 TIAM1Q13009 1591 aa31.02■■■□□ 2.56
SH3D21-202ENST00000474766 EPRSP07814 1512 aaKnown RBP31.02■■■□□ 2.56
SH3D21-202ENST00000474766 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
SH3D21-202ENST00000474766 CLSPNQ9HAW4 1339 aa31■■■□□ 2.55
SH3D21-202ENST00000474766 FYCO1Q9BQS8 1478 aa30.98■■■□□ 2.55
SH3D21-202ENST00000474766 CCNB3Q8WWL7 1395 aa30.98■■■□□ 2.55
SH3D21-202ENST00000474766 GLI2P10070 1586 aa30.97■■■□□ 2.55
SH3D21-202ENST00000474766 DHX57Q6P158 1386 aaKnown RBP30.93■■■□□ 2.54
SH3D21-202ENST00000474766 MIER1Q8N108 512 aa30.93■■■□□ 2.54
SH3D21-202ENST00000474766 TSPOAP1O95153 1857 aa30.91■■■□□ 2.54
SH3D21-202ENST00000474766 KCNH8Q96L42 1107 aa30.91■■■□□ 2.54
SH3D21-202ENST00000474766 YTHDC1Q96MU7 727 aaKnown RBP30.9■■■□□ 2.54
SH3D21-202ENST00000474766 MAP3K4Q9Y6R4 1608 aa30.89■■■□□ 2.54
SH3D21-202ENST00000474766 LRRC9Q6ZRR7 1453 aa30.89■■■□□ 2.53
SH3D21-202ENST00000474766 CCDC18Q5T9S5 1454 aa30.85■■■□□ 2.53
SH3D21-202ENST00000474766 PPRC1Q5VV67 1664 aaKnown RBP30.85■■■□□ 2.53
SH3D21-202ENST00000474766 CFAP43Q8NDM7 1665 aa30.85■■■□□ 2.53
SH3D21-202ENST00000474766 PLEKHD1A6NEE1 506 aa30.84■■■□□ 2.53
SH3D21-202ENST00000474766 ABCA9Q8IUA7 1624 aa30.8■■■□□ 2.52
SH3D21-202ENST00000474766 MAGI3Q5TCQ9 1506 aa30.76■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms