RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 CUL7Q14999 1698 aa18.24■□□□□ 0.51
RNF220-210ENST00000474394 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
RNF220-210ENST00000474394 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
RNF220-210ENST00000474394 FAM69CQ0P6D2 419 aa18.18■□□□□ 0.5
RNF220-210ENST00000474394 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
RNF220-210ENST00000474394 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
RNF220-210ENST00000474394 ABCC10Q5T3U5 1492 aa18.13■□□□□ 0.49
RNF220-210ENST00000474394 JPH4Q96JJ6 628 aa18.1■□□□□ 0.49
RNF220-210ENST00000474394 KDM6BO15054 1643 aa18.09■□□□□ 0.49
RNF220-210ENST00000474394 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
RNF220-210ENST00000474394 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
RNF220-210ENST00000474394 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
RNF220-210ENST00000474394 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
RNF220-210ENST00000474394 PRG4Q92954 1404 aaPredicted RBP18.06■□□□□ 0.48
RNF220-210ENST00000474394 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
RNF220-210ENST00000474394 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
RNF220-210ENST00000474394 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
RNF220-210ENST00000474394 EEA1Q15075 1411 aa18.01■□□□□ 0.47
RNF220-210ENST00000474394 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
RNF220-210ENST00000474394 PRXQ9BXM0 1461 aa18■□□□□ 0.47
RNF220-210ENST00000474394 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
RNF220-210ENST00000474394 CARMIL2Q6F5E8 1435 aa17.92■□□□□ 0.46
RNF220-210ENST00000474394 ADCY10Q96PN6 1610 aa17.92■□□□□ 0.46
RNF220-210ENST00000474394 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
RNF220-210ENST00000474394 ADGRL1O94910 1474 aa17.91■□□□□ 0.46
RNF220-210ENST00000474394 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
RNF220-210ENST00000474394 CTTNBP2Q8WZ74 1663 aa17.88■□□□□ 0.45
RNF220-210ENST00000474394 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
RNF220-210ENST00000474394 PTPRGP23470 1445 aa17.85■□□□□ 0.45
RNF220-210ENST00000474394 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
RNF220-210ENST00000474394 DISP1Q96F81 1524 aa17.83■□□□□ 0.45
RNF220-210ENST00000474394 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
RNF220-210ENST00000474394 FBXO41Q8TF61 875 aa17.82■□□□□ 0.44
RNF220-210ENST00000474394 KIF21BO75037 1637 aa17.8■□□□□ 0.44
RNF220-210ENST00000474394 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
RNF220-210ENST00000474394 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
RNF220-210ENST00000474394 PPRC1Q5VV67 1664 aaKnown RBP17.75■□□□□ 0.43
RNF220-210ENST00000474394 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
RNF220-210ENST00000474394 GLI2P10070 1586 aa17.7■□□□□ 0.42
RNF220-210ENST00000474394 UHRF1BP1LA0JNW5 1464 aa17.69■□□□□ 0.42
RNF220-210ENST00000474394 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
RNF220-210ENST00000474394 UBTFP17480 764 aaKnown RBP17.69■□□□□ 0.42
RNF220-210ENST00000474394 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
RNF220-210ENST00000474394 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
RNF220-210ENST00000474394 ABCC2Q92887 1545 aa17.67■□□□□ 0.42
RNF220-210ENST00000474394 ASXL2Q76L83 1435 aa17.67■□□□□ 0.42
RNF220-210ENST00000474394 P3H3Q8IVL6 736 aa17.67■□□□□ 0.42
RNF220-210ENST00000474394 RANGAP1P46060 587 aaPredicted RBP17.66■□□□□ 0.42
RNF220-210ENST00000474394 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
RNF220-210ENST00000474394 KDM5BQ9UGL1 1544 aa17.61■□□□□ 0.41
RNF220-210ENST00000474394 TEX14Q8IWB6 1497 aa17.6■□□□□ 0.41
RNF220-210ENST00000474394 ABCA8O94911 1581 aa17.6■□□□□ 0.41
RNF220-210ENST00000474394 MAP3K4Q9Y6R4 1608 aa17.59■□□□□ 0.41
RNF220-210ENST00000474394 EFCAB5A4FU69 1503 aa17.59■□□□□ 0.41
RNF220-210ENST00000474394 FHOD3Q2V2M9 1422 aa17.56■□□□□ 0.4
RNF220-210ENST00000474394 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
RNF220-210ENST00000474394 ZCCHC11Q5TAX3 1644 aaKnown RBP17.55■□□□□ 0.4
RNF220-210ENST00000474394 LMTK3Q96Q04 1460 aa17.55■□□□□ 0.4
RNF220-210ENST00000474394 RAPGEF6Q8TEU7 1601 aa17.5■□□□□ 0.39
RNF220-210ENST00000474394 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
RNF220-210ENST00000474394 WDR7Q9Y4E6 1490 aa17.48■□□□□ 0.39
RNF220-210ENST00000474394 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
RNF220-210ENST00000474394 ATP10BO94823 1461 aa17.47■□□□□ 0.39
RNF220-210ENST00000474394 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
RNF220-210ENST00000474394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
RNF220-210ENST00000474394 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
RNF220-210ENST00000474394 NUP153P49790 1475 aaKnown RBP17.44■□□□□ 0.38
RNF220-210ENST00000474394 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
RNF220-210ENST00000474394 SOCS7O14512 581 aa17.4■□□□□ 0.38
RNF220-210ENST00000474394 CLIP1P30622 1438 aa17.38■□□□□ 0.37
RNF220-210ENST00000474394 PTPRMP28827 1452 aa17.38■□□□□ 0.37
RNF220-210ENST00000474394 CD109Q6YHK3 1445 aa17.38■□□□□ 0.37
RNF220-210ENST00000474394 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
RNF220-210ENST00000474394 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
RNF220-210ENST00000474394 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
RNF220-210ENST00000474394 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
RNF220-210ENST00000474394 HECW1Q76N89 1606 aa17.35■□□□□ 0.37
RNF220-210ENST00000474394 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
RNF220-210ENST00000474394 ADAMTSL3P82987 1691 aa17.34■□□□□ 0.37
RNF220-210ENST00000474394 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
RNF220-210ENST00000474394 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
RNF220-210ENST00000474394 LOC105371045A0A1W2PR82 267 aa17.31■□□□□ 0.36
RNF220-210ENST00000474394 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
RNF220-210ENST00000474394 CERKQ8TCT0 537 aa17.29■□□□□ 0.36
RNF220-210ENST00000474394 CEP162Q5TB80 1403 aa17.29■□□□□ 0.36
RNF220-210ENST00000474394 CASKIN1Q8WXD9 1431 aa17.29■□□□□ 0.36
RNF220-210ENST00000474394 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
RNF220-210ENST00000474394 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
RNF220-210ENST00000474394 ARAP3Q8WWN8 1544 aa17.27■□□□□ 0.36
RNF220-210ENST00000474394 FYCO1Q9BQS8 1478 aa17.24■□□□□ 0.35
RNF220-210ENST00000474394 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
RNF220-210ENST00000474394 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
RNF220-210ENST00000474394 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
RNF220-210ENST00000474394 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
RNF220-210ENST00000474394 HSPA2P54652 639 aa17.2■□□□□ 0.34
RNF220-210ENST00000474394 TROQ12816 1431 aaPredicted RBP17.2■□□□□ 0.34
RNF220-210ENST00000474394 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
RNF220-210ENST00000474394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
RNF220-210ENST00000474394 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
RNF220-210ENST00000474394 RAPGEF3O95398 923 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms