RNA–Protein interactions for RNA: ENST00000474326.1

PFDN4-203, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 191 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-203ENST00000474326 PRG4Q92954 1404 aaPredicted RBP28.23■■■□□ 2.11
PFDN4-203ENST00000474326 KIAA0586Q9BVV6 1533 aa28.23■■■□□ 2.11
PFDN4-203ENST00000474326 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
PFDN4-203ENST00000474326 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
PFDN4-203ENST00000474326 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
PFDN4-203ENST00000474326 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
PFDN4-203ENST00000474326 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
PFDN4-203ENST00000474326 EEA1Q15075 1411 aa27.98■■■□□ 2.07
PFDN4-203ENST00000474326 PRXQ9BXM0 1461 aa27.95■■■□□ 2.06
PFDN4-203ENST00000474326 CTTNBP2Q8WZ74 1663 aa27.94■■■□□ 2.06
PFDN4-203ENST00000474326 NPM1P06748 294 aaKnown RBP eCLIP27.92■■■□□ 2.06
PFDN4-203ENST00000474326 CSRNP3Q8WYN3 585 aa27.92■■■□□ 2.06
PFDN4-203ENST00000474326 TNIKQ9UKE5 1360 aa27.88■■■□□ 2.05
PFDN4-203ENST00000474326 PTPRGP23470 1445 aa27.88■■■□□ 2.05
PFDN4-203ENST00000474326 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
PFDN4-203ENST00000474326 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
PFDN4-203ENST00000474326 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
PFDN4-203ENST00000474326 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
PFDN4-203ENST00000474326 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
PFDN4-203ENST00000474326 DISP1Q96F81 1524 aa27.8■■■□□ 2.04
PFDN4-203ENST00000474326 ADCY10Q96PN6 1610 aa27.8■■■□□ 2.04
PFDN4-203ENST00000474326 KIAA0556O60303 1618 aa27.78■■■□□ 2.04
PFDN4-203ENST00000474326 MAPKBP1O60336 1514 aa27.7■■■□□ 2.02
PFDN4-203ENST00000474326 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
PFDN4-203ENST00000474326 KIF21BO75037 1637 aa27.66■■■□□ 2.02
PFDN4-203ENST00000474326 UHRF1BP1LA0JNW5 1464 aa27.65■■■□□ 2.02
PFDN4-203ENST00000474326 ABCC2Q92887 1545 aa27.65■■■□□ 2.02
PFDN4-203ENST00000474326 ABCC10Q5T3U5 1492 aa27.58■■■□□ 2.01
PFDN4-203ENST00000474326 KIF13AQ9H1H9 1805 aa27.58■■■□□ 2.01
PFDN4-203ENST00000474326 FAM69CQ0P6D2 419 aa27.57■■■□□ 2
PFDN4-203ENST00000474326 DIP2BQ9P265 1576 aa27.53■■■□□ 2
PFDN4-203ENST00000474326 PLB1Q6P1J6 1458 aa27.51■■■□□ 2
PFDN4-203ENST00000474326 RANGAP1P46060 587 aaPredicted RBP27.51■■□□□ 1.99
PFDN4-203ENST00000474326 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
PFDN4-203ENST00000474326 SAMD9Q5K651 1589 aa27.51■■□□□ 1.99
PFDN4-203ENST00000474326 UBTFP17480 764 aaKnown RBP27.5■■□□□ 1.99
PFDN4-203ENST00000474326 KDM5BQ9UGL1 1544 aa27.5■■□□□ 1.99
PFDN4-203ENST00000474326 ASXL2Q76L83 1435 aa27.49■■□□□ 1.99
PFDN4-203ENST00000474326 ZCCHC11Q5TAX3 1644 aaKnown RBP27.48■■□□□ 1.99
PFDN4-203ENST00000474326 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
PFDN4-203ENST00000474326 ABCA8O94911 1581 aa27.45■■□□□ 1.99
PFDN4-203ENST00000474326 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
PFDN4-203ENST00000474326 GLI2P10070 1586 aa27.35■■□□□ 1.97
PFDN4-203ENST00000474326 FHOD3Q2V2M9 1422 aa27.34■■□□□ 1.97
PFDN4-203ENST00000474326 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
PFDN4-203ENST00000474326 RAPGEF6Q8TEU7 1601 aa27.34■■□□□ 1.97
PFDN4-203ENST00000474326 WDR7Q9Y4E6 1490 aa27.33■■□□□ 1.97
PFDN4-203ENST00000474326 EPRSP07814 1512 aaKnown RBP27.31■■□□□ 1.96
PFDN4-203ENST00000474326 ARID3CA6NKF2 412 aa27.27■■□□□ 1.96
PFDN4-203ENST00000474326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.95
PFDN4-203ENST00000474326 HNRNPUL2Q1KMD3 747 aaKnown RBP27.26■■□□□ 1.95
PFDN4-203ENST00000474326 ATP10BO94823 1461 aa27.22■■□□□ 1.95
PFDN4-203ENST00000474326 KCNH8Q96L42 1107 aa27.22■■□□□ 1.95
PFDN4-203ENST00000474326 KDM6BO15054 1643 aa27.22■■□□□ 1.95
PFDN4-203ENST00000474326 MAP3K4Q9Y6R4 1608 aa27.21■■□□□ 1.95
PFDN4-203ENST00000474326 TEX14Q8IWB6 1497 aa27.2■■□□□ 1.95
PFDN4-203ENST00000474326 FMN1Q68DA7 1419 aa27.18■■□□□ 1.94
PFDN4-203ENST00000474326 NUP153P49790 1475 aaKnown RBP27.17■■□□□ 1.94
PFDN4-203ENST00000474326 CFAP43Q8NDM7 1665 aa27.15■■□□□ 1.94
PFDN4-203ENST00000474326 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
PFDN4-203ENST00000474326 PPRC1Q5VV67 1664 aaKnown RBP27.13■■□□□ 1.93
PFDN4-203ENST00000474326 CD109Q6YHK3 1445 aa27.11■■□□□ 1.93
PFDN4-203ENST00000474326 ATP1B4Q9UN42 357 aaPredicted RBP27.1■■□□□ 1.93
PFDN4-203ENST00000474326 HECW1Q76N89 1606 aa27.08■■□□□ 1.93
PFDN4-203ENST00000474326 PLEKHD1A6NEE1 506 aa27.08■■□□□ 1.93
PFDN4-203ENST00000474326 MAGI3Q5TCQ9 1506 aa27.05■■□□□ 1.92
PFDN4-203ENST00000474326 ABCA9Q8IUA7 1624 aa27.01■■□□□ 1.92
PFDN4-203ENST00000474326 CLIP1P30622 1438 aa26.99■■□□□ 1.91
PFDN4-203ENST00000474326 CDK11AQ9UQ88 783 aaPredicted RBP26.98■■□□□ 1.91
PFDN4-203ENST00000474326 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
PFDN4-203ENST00000474326 AEBP2Q6ZN18 517 aaPredicted RBP26.9■■□□□ 1.9
PFDN4-203ENST00000474326 PHLDB1Q86UU1 1377 aa26.89■■□□□ 1.9
PFDN4-203ENST00000474326 CASKIN1Q8WXD9 1431 aa26.89■■□□□ 1.89
PFDN4-203ENST00000474326 PCF11O94913 1555 aaKnown RBP26.88■■□□□ 1.89
PFDN4-203ENST00000474326 CCDC18Q5T9S5 1454 aa26.87■■□□□ 1.89
PFDN4-203ENST00000474326 COL17A1Q9UMD9 1497 aaPredicted RBP26.86■■□□□ 1.89
PFDN4-203ENST00000474326 NEO1Q92859 1461 aa26.85■■□□□ 1.89
PFDN4-203ENST00000474326 FYCO1Q9BQS8 1478 aa26.85■■□□□ 1.89
PFDN4-203ENST00000474326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.83■■□□□ 1.89
PFDN4-203ENST00000474326 CFAP74Q9C0B2 1584 aa26.82■■□□□ 1.88
PFDN4-203ENST00000474326 ARAP3Q8WWN8 1544 aa26.81■■□□□ 1.88
PFDN4-203ENST00000474326 CEP162Q5TB80 1403 aa26.81■■□□□ 1.88
PFDN4-203ENST00000474326 KIF14Q15058 1648 aa26.8■■□□□ 1.88
PFDN4-203ENST00000474326 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
PFDN4-203ENST00000474326 TROQ12816 1431 aaPredicted RBP26.78■■□□□ 1.88
PFDN4-203ENST00000474326 LRRIQ1Q96JM4 1722 aa26.78■■□□□ 1.88
PFDN4-203ENST00000474326 FANCAO15360 1455 aa26.76■■□□□ 1.87
PFDN4-203ENST00000474326 MYO5CQ9NQX4 1742 aa26.72■■□□□ 1.87
PFDN4-203ENST00000474326 AKNAQ7Z591 1439 aa26.7■■□□□ 1.86
PFDN4-203ENST00000474326 PLCH2O75038 1416 aa26.69■■□□□ 1.86
PFDN4-203ENST00000474326 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
PFDN4-203ENST00000474326 DENND4BO75064 1496 aaPredicted RBP26.66■■□□□ 1.86
PFDN4-203ENST00000474326 RAPGEF3O95398 923 aa26.65■■□□□ 1.86
PFDN4-203ENST00000474326 EFCAB2Q5VUJ9 269 aa26.64■■□□□ 1.86
PFDN4-203ENST00000474326 ARHGAP5Q13017 1502 aa26.63■■□□□ 1.85
PFDN4-203ENST00000474326 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
PFDN4-203ENST00000474326 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
PFDN4-203ENST00000474326 FRMPD1Q5SYB0 1578 aa26.57■■□□□ 1.84
PFDN4-203ENST00000474326 RICTORQ6R327 1708 aa26.56■■□□□ 1.84
PFDN4-203ENST00000474326 KDM4FA0A1W2PPD8 638 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms