RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 PRG4Q92954 1404 aaPredicted RBP31.61■■■□□ 2.65
CCDC171-206ENST00000474193 ERCC6L2Q5T890 1561 aa31.57■■■□□ 2.64
CCDC171-206ENST00000474193 KIAA0586Q9BVV6 1533 aa31.55■■■□□ 2.64
CCDC171-206ENST00000474193 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
CCDC171-206ENST00000474193 RAPGEF2Q9Y4G8 1499 aa31.4■■■□□ 2.62
CCDC171-206ENST00000474193 NPM1P06748 294 aaKnown RBP eCLIP31.37■■■□□ 2.61
CCDC171-206ENST00000474193 CARMIL2Q6F5E8 1435 aa31.33■■■□□ 2.61
CCDC171-206ENST00000474193 IQGAP2Q13576 1575 aa31.28■■■□□ 2.6
CCDC171-206ENST00000474193 PTPRGP23470 1445 aa31.23■■■□□ 2.59
CCDC171-206ENST00000474193 TTBK1Q5TCY1 1321 aaPredicted RBP31.23■■■□□ 2.59
CCDC171-206ENST00000474193 TNIKQ9UKE5 1360 aa31.19■■■□□ 2.58
CCDC171-206ENST00000474193 CSRNP3Q8WYN3 585 aa31.15■■■□□ 2.58
CCDC171-206ENST00000474193 PRXQ9BXM0 1461 aa31.11■■■□□ 2.57
CCDC171-206ENST00000474193 UGGT2Q9NYU1 1516 aa31.08■■■□□ 2.57
CCDC171-206ENST00000474193 EEA1Q15075 1411 aa31.07■■■□□ 2.57
CCDC171-206ENST00000474193 ADCY10Q96PN6 1610 aa31.06■■■□□ 2.56
CCDC171-206ENST00000474193 CTTNBP2Q8WZ74 1663 aa31.04■■■□□ 2.56
CCDC171-206ENST00000474193 FAM9AQ8IZU1 332 aaPredicted RBP31.04■■■□□ 2.56
CCDC171-206ENST00000474193 DISP1Q96F81 1524 aa31.03■■■□□ 2.56
CCDC171-206ENST00000474193 FAM69CQ0P6D2 419 aa31.01■■■□□ 2.55
CCDC171-206ENST00000474193 GOLGA3Q08378 1498 aa31■■■□□ 2.55
CCDC171-206ENST00000474193 MAPKBP1O60336 1514 aa30.99■■■□□ 2.55
CCDC171-206ENST00000474193 UACAQ9BZF9 1416 aa30.97■■■□□ 2.55
CCDC171-206ENST00000474193 KIAA0556O60303 1618 aa30.95■■■□□ 2.54
CCDC171-206ENST00000474193 ABCC10Q5T3U5 1492 aa30.94■■■□□ 2.54
CCDC171-206ENST00000474193 ABCC2Q92887 1545 aa30.93■■■□□ 2.54
CCDC171-206ENST00000474193 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
CCDC171-206ENST00000474193 UHRF1BP1LA0JNW5 1464 aa30.91■■■□□ 2.54
CCDC171-206ENST00000474193 KIF13AQ9H1H9 1805 aa30.9■■■□□ 2.54
CCDC171-206ENST00000474193 PLB1Q6P1J6 1458 aa30.82■■■□□ 2.52
CCDC171-206ENST00000474193 DIP2BQ9P265 1576 aa30.8■■■□□ 2.52
CCDC171-206ENST00000474193 ASXL2Q76L83 1435 aa30.78■■■□□ 2.52
CCDC171-206ENST00000474193 P3H3Q8IVL6 736 aa30.77■■■□□ 2.52
CCDC171-206ENST00000474193 KDM5BQ9UGL1 1544 aa30.76■■■□□ 2.51
CCDC171-206ENST00000474193 RANGAP1P46060 587 aaPredicted RBP30.71■■■□□ 2.51
CCDC171-206ENST00000474193 KIF21BO75037 1637 aa30.66■■■□□ 2.5
CCDC171-206ENST00000474193 UBTFP17480 764 aaKnown RBP30.66■■■□□ 2.5
CCDC171-206ENST00000474193 ZCCHC11Q5TAX3 1644 aaKnown RBP30.65■■■□□ 2.5
CCDC171-206ENST00000474193 TSPOAP1O95153 1857 aa30.63■■■□□ 2.49
CCDC171-206ENST00000474193 ABCA8O94911 1581 aa30.63■■■□□ 2.49
CCDC171-206ENST00000474193 GLI2P10070 1586 aa30.61■■■□□ 2.49
CCDC171-206ENST00000474193 EHMT2Q96KQ7 1210 aa30.59■■■□□ 2.49
CCDC171-206ENST00000474193 SAMD9Q5K651 1589 aa30.58■■■□□ 2.49
CCDC171-206ENST00000474193 EPRSP07814 1512 aaKnown RBP30.57■■■□□ 2.48
CCDC171-206ENST00000474193 WDR7Q9Y4E6 1490 aa30.56■■■□□ 2.48
CCDC171-206ENST00000474193 KCNH8Q96L42 1107 aa30.54■■■□□ 2.48
CCDC171-206ENST00000474193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.51■■■□□ 2.47
CCDC171-206ENST00000474193 HNRNPUL2Q1KMD3 747 aaKnown RBP30.51■■■□□ 2.47
CCDC171-206ENST00000474193 ARID3CA6NKF2 412 aa30.5■■■□□ 2.47
CCDC171-206ENST00000474193 KDM6BO15054 1643 aa30.5■■■□□ 2.47
CCDC171-206ENST00000474193 AEBP2Q6ZN18 517 aaPredicted RBP30.47■■■□□ 2.47
CCDC171-206ENST00000474193 EFCAB5A4FU69 1503 aa30.47■■■□□ 2.47
CCDC171-206ENST00000474193 FHOD3Q2V2M9 1422 aa30.46■■■□□ 2.47
CCDC171-206ENST00000474193 TEX14Q8IWB6 1497 aa30.45■■■□□ 2.47
CCDC171-206ENST00000474193 ATP10BO94823 1461 aa30.44■■■□□ 2.46
CCDC171-206ENST00000474193 RAPGEF6Q8TEU7 1601 aa30.44■■■□□ 2.46
CCDC171-206ENST00000474193 MAP3K4Q9Y6R4 1608 aa30.41■■■□□ 2.46
CCDC171-206ENST00000474193 CD109Q6YHK3 1445 aa30.38■■■□□ 2.45
CCDC171-206ENST00000474193 PPRC1Q5VV67 1664 aaKnown RBP30.34■■■□□ 2.45
CCDC171-206ENST00000474193 CFAP43Q8NDM7 1665 aa30.33■■■□□ 2.45
CCDC171-206ENST00000474193 PLEKHD1A6NEE1 506 aa30.32■■■□□ 2.44
CCDC171-206ENST00000474193 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
CCDC171-206ENST00000474193 NUP153P49790 1475 aaKnown RBP30.29■■■□□ 2.44
CCDC171-206ENST00000474193 MAGI3Q5TCQ9 1506 aa30.27■■■□□ 2.44
CCDC171-206ENST00000474193 FMN1Q68DA7 1419 aa30.27■■■□□ 2.44
CCDC171-206ENST00000474193 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.43
CCDC171-206ENST00000474193 CDK11AQ9UQ88 783 aaPredicted RBP30.17■■■□□ 2.42
CCDC171-206ENST00000474193 COL17A1Q9UMD9 1497 aaPredicted RBP30.15■■■□□ 2.42
CCDC171-206ENST00000474193 PHLDB1Q86UU1 1377 aa30.15■■■□□ 2.42
CCDC171-206ENST00000474193 ABCA9Q8IUA7 1624 aa30.14■■■□□ 2.42
CCDC171-206ENST00000474193 HECW1Q76N89 1606 aa30.09■■■□□ 2.41
CCDC171-206ENST00000474193 CDK13Q14004 1512 aaKnown RBP30.04■■■□□ 2.4
CCDC171-206ENST00000474193 ARAP3Q8WWN8 1544 aa30.02■■■□□ 2.4
CCDC171-206ENST00000474193 NEO1Q92859 1461 aa30.02■■■□□ 2.4
CCDC171-206ENST00000474193 CLIP1P30622 1438 aa29.98■■■□□ 2.39
CCDC171-206ENST00000474193 KDM4FA0A1W2PPD8 638 aa29.97■■■□□ 2.39
CCDC171-206ENST00000474193 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.94■■■□□ 2.38
CCDC171-206ENST00000474193 CASKIN1Q8WXD9 1431 aa29.92■■■□□ 2.38
CCDC171-206ENST00000474193 RAPGEF3O95398 923 aa29.91■■■□□ 2.38
CCDC171-206ENST00000474193 FANCAO15360 1455 aa29.89■■■□□ 2.38
CCDC171-206ENST00000474193 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
CCDC171-206ENST00000474193 CFAP74Q9C0B2 1584 aa29.88■■■□□ 2.37
CCDC171-206ENST00000474193 AKNAQ7Z591 1439 aa29.88■■■□□ 2.37
CCDC171-206ENST00000474193 TROQ12816 1431 aaPredicted RBP29.87■■■□□ 2.37
CCDC171-206ENST00000474193 EFCAB2Q5VUJ9 269 aa29.85■■■□□ 2.37
CCDC171-206ENST00000474193 TTC37Q6PGP7 1564 aa29.85■■■□□ 2.37
CCDC171-206ENST00000474193 ADGRL1O94910 1474 aa29.84■■■□□ 2.37
CCDC171-206ENST00000474193 DENND4BO75064 1496 aaPredicted RBP29.83■■■□□ 2.37
CCDC171-206ENST00000474193 PLCH2O75038 1416 aa29.83■■■□□ 2.37
CCDC171-206ENST00000474193 PCF11O94913 1555 aaKnown RBP29.81■■■□□ 2.36
CCDC171-206ENST00000474193 FYCO1Q9BQS8 1478 aa29.81■■■□□ 2.36
CCDC171-206ENST00000474193 KIF14Q15058 1648 aa29.81■■■□□ 2.36
CCDC171-206ENST00000474193 LRRIQ1Q96JM4 1722 aa29.75■■■□□ 2.35
CCDC171-206ENST00000474193 MYO5CQ9NQX4 1742 aa29.75■■■□□ 2.35
CCDC171-206ENST00000474193 CEP162Q5TB80 1403 aa29.72■■■□□ 2.35
CCDC171-206ENST00000474193 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
CCDC171-206ENST00000474193 SCAPERQ9BY12 1400 aa29.71■■■□□ 2.35
CCDC171-206ENST00000474193 ARHGAP5Q13017 1502 aa29.68■■■□□ 2.34
CCDC171-206ENST00000474193 LOC105371045A0A1W2PR82 267 aa29.67■■■□□ 2.34
CCDC171-206ENST00000474193 FRMPD1Q5SYB0 1578 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms