RNA–Protein interactions for RNA: ENST00000474158.1

ABCC4-204, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2

Gene ABCC4, Length 697 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-204ENST00000474158 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
ABCC4-204ENST00000474158 FAM69CQ0P6D2 419 aa15.43■□□□□ 0.06
ABCC4-204ENST00000474158 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
ABCC4-204ENST00000474158 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
ABCC4-204ENST00000474158 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
ABCC4-204ENST00000474158 HECW2Q9P2P5 1572 aa15.41■□□□□ 0.06
ABCC4-204ENST00000474158 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
ABCC4-204ENST00000474158 KDM6BO15054 1643 aa15.41■□□□□ 0.06
ABCC4-204ENST00000474158 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
ABCC4-204ENST00000474158 ABCC10Q5T3U5 1492 aa15.39■□□□□ 0.05
ABCC4-204ENST00000474158 TSPOAP1O95153 1857 aa15.36■□□□□ 0.05
ABCC4-204ENST00000474158 DIP2BQ9P265 1576 aa15.34■□□□□ 0.05
ABCC4-204ENST00000474158 FBXO41Q8TF61 875 aa15.34■□□□□ 0.05
ABCC4-204ENST00000474158 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
ABCC4-204ENST00000474158 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
ABCC4-204ENST00000474158 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
ABCC4-204ENST00000474158 CUX1P39880 1505 aa15.3■□□□□ 0.04
ABCC4-204ENST00000474158 GRIN2AQ12879 1464 aa15.29■□□□□ 0.04
ABCC4-204ENST00000474158 NUP160Q12769 1436 aa15.27■□□□□ 0.04
ABCC4-204ENST00000474158 MAPKBP1O60336 1514 aa15.25■□□□□ 0.03
ABCC4-204ENST00000474158 ABCA5Q8WWZ7 1642 aa15.25■□□□□ 0.03
ABCC4-204ENST00000474158 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
ABCC4-204ENST00000474158 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
ABCC4-204ENST00000474158 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
ABCC4-204ENST00000474158 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
ABCC4-204ENST00000474158 ADCY10Q96PN6 1610 aa15.19■□□□□ 0.02
ABCC4-204ENST00000474158 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
ABCC4-204ENST00000474158 ADAMTS12P58397 1594 aa15.18■□□□□ 0.02
ABCC4-204ENST00000474158 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
ABCC4-204ENST00000474158 ILDR2Q71H61 639 aa15.16■□□□□ 0.02
ABCC4-204ENST00000474158 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
ABCC4-204ENST00000474158 PPRC1Q5VV67 1664 aaKnown RBP15.13■□□□□ 0.01
ABCC4-204ENST00000474158 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
ABCC4-204ENST00000474158 SOCS7O14512 581 aa15.1■□□□□ 0.01
ABCC4-204ENST00000474158 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
ABCC4-204ENST00000474158 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
ABCC4-204ENST00000474158 DISP3Q9P2K9 1392 aa14.96□□□□□ -0.02
ABCC4-204ENST00000474158 GLI2P10070 1586 aa14.95□□□□□ -0.02
ABCC4-204ENST00000474158 TOP2BQ02880 1626 aa14.94□□□□□ -0.02
ABCC4-204ENST00000474158 ASXL2Q76L83 1435 aa14.93□□□□□ -0.02
ABCC4-204ENST00000474158 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
ABCC4-204ENST00000474158 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
ABCC4-204ENST00000474158 TTBK1Q5TCY1 1321 aaPredicted RBP14.89□□□□□ -0.03
ABCC4-204ENST00000474158 MAP3K4Q9Y6R4 1608 aa14.88□□□□□ -0.03
ABCC4-204ENST00000474158 CUL7Q14999 1698 aa14.87□□□□□ -0.03
ABCC4-204ENST00000474158 PLB1Q6P1J6 1458 aa14.87□□□□□ -0.03
ABCC4-204ENST00000474158 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
ABCC4-204ENST00000474158 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
ABCC4-204ENST00000474158 KIF21BO75037 1637 aa14.85□□□□□ -0.03
ABCC4-204ENST00000474158 PTPRGP23470 1445 aa14.83□□□□□ -0.03
ABCC4-204ENST00000474158 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
ABCC4-204ENST00000474158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
ABCC4-204ENST00000474158 TEX14Q8IWB6 1497 aa14.81□□□□□ -0.04
ABCC4-204ENST00000474158 CERKQ8TCT0 537 aa14.8□□□□□ -0.04
ABCC4-204ENST00000474158 PTPRMP28827 1452 aa14.8□□□□□ -0.04
ABCC4-204ENST00000474158 KIAA0586Q9BVV6 1533 aa14.79□□□□□ -0.04
ABCC4-204ENST00000474158 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
ABCC4-204ENST00000474158 PCF11O94913 1555 aaKnown RBP14.77□□□□□ -0.04
ABCC4-204ENST00000474158 ADAMTSL3P82987 1691 aa14.76□□□□□ -0.05
ABCC4-204ENST00000474158 SPATA31D1Q6ZQQ2 1576 aa14.75□□□□□ -0.05
ABCC4-204ENST00000474158 HSPA2P54652 639 aa14.73□□□□□ -0.05
ABCC4-204ENST00000474158 POTEHQ6S545 545 aa14.73□□□□□ -0.05
ABCC4-204ENST00000474158 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
ABCC4-204ENST00000474158 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
ABCC4-204ENST00000474158 KDM5BQ9UGL1 1544 aa14.7□□□□□ -0.06
ABCC4-204ENST00000474158 ZCCHC11Q5TAX3 1644 aaKnown RBP14.7□□□□□ -0.06
ABCC4-204ENST00000474158 UACAQ9BZF9 1416 aa14.69□□□□□ -0.06
ABCC4-204ENST00000474158 MADDQ8WXG6 1647 aa14.66□□□□□ -0.06
ABCC4-204ENST00000474158 KCNA4P22459 653 aa14.64□□□□□ -0.07
ABCC4-204ENST00000474158 MAGI3Q5TCQ9 1506 aa14.64□□□□□ -0.07
ABCC4-204ENST00000474158 CD109Q6YHK3 1445 aa14.63□□□□□ -0.07
ABCC4-204ENST00000474158 BCORL1Q5H9F3 1711 aa14.63□□□□□ -0.07
ABCC4-204ENST00000474158 CARMIL2Q6F5E8 1435 aa14.62□□□□□ -0.07
ABCC4-204ENST00000474158 IGF1RP08069 1367 aa14.61□□□□□ -0.07
ABCC4-204ENST00000474158 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
ABCC4-204ENST00000474158 CFAP43Q8NDM7 1665 aa14.6□□□□□ -0.07
ABCC4-204ENST00000474158 DISP1Q96F81 1524 aa14.59□□□□□ -0.07
ABCC4-204ENST00000474158 RIMS1Q86UR5 1692 aaKnown RBP14.58□□□□□ -0.07
ABCC4-204ENST00000474158 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
ABCC4-204ENST00000474158 ARAP3Q8WWN8 1544 aa14.56□□□□□ -0.08
ABCC4-204ENST00000474158 IQGAP2Q13576 1575 aa14.53□□□□□ -0.08
ABCC4-204ENST00000474158 RAPGEF3O95398 923 aa14.53□□□□□ -0.08
ABCC4-204ENST00000474158 ARID4BQ4LE39 1312 aaPredicted RBP14.52□□□□□ -0.08
ABCC4-204ENST00000474158 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
ABCC4-204ENST00000474158 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
ABCC4-204ENST00000474158 FRMPD1Q5SYB0 1578 aa14.45□□□□□ -0.1
ABCC4-204ENST00000474158 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
ABCC4-204ENST00000474158 SIGLEC1Q9BZZ2 1709 aa14.44□□□□□ -0.1
ABCC4-204ENST00000474158 CAPN15O75808 1086 aa14.42□□□□□ -0.1
ABCC4-204ENST00000474158 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
ABCC4-204ENST00000474158 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
ABCC4-204ENST00000474158 DSG3P32926 999 aa14.4□□□□□ -0.1
ABCC4-204ENST00000474158 YEATS2Q9ULM3 1422 aa14.39□□□□□ -0.11
ABCC4-204ENST00000474158 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
ABCC4-204ENST00000474158 ABCA8O94911 1581 aa14.37□□□□□ -0.11
ABCC4-204ENST00000474158 LTBP4Q8N2S1 1624 aa14.37□□□□□ -0.11
ABCC4-204ENST00000474158 U3KPZ7 1027 aaPredicted RBP14.36□□□□□ -0.11
ABCC4-204ENST00000474158 ARHGEF40Q8TER5 1519 aa14.36□□□□□ -0.11
ABCC4-204ENST00000474158 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
ABCC4-204ENST00000474158 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms