RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 IGF1RP08069 1367 aa36.1■■■■□ 3.37
ARF1-206ENST00000473949 CUL7Q14999 1698 aa36.05■■■■□ 3.36
ARF1-206ENST00000473949 KIAA0586Q9BVV6 1533 aa35.97■■■■□ 3.35
ARF1-206ENST00000473949 CARMIL1Q5VZK9 1371 aa35.9■■■■□ 3.34
ARF1-206ENST00000473949 NPM1P06748 294 aaKnown RBP eCLIP35.86■■■■□ 3.33
ARF1-206ENST00000473949 KIF13AQ9H1H9 1805 aa35.78■■■■□ 3.32
ARF1-206ENST00000473949 ADCY10Q96PN6 1610 aa35.75■■■■□ 3.31
ARF1-206ENST00000473949 TTBK1Q5TCY1 1321 aaPredicted RBP35.7■■■■□ 3.31
ARF1-206ENST00000473949 FAM69CQ0P6D2 419 aa35.69■■■■□ 3.3
ARF1-206ENST00000473949 MAPKBP1O60336 1514 aa35.68■■■■□ 3.3
ARF1-206ENST00000473949 ABCC10Q5T3U5 1492 aa35.67■■■■□ 3.3
ARF1-206ENST00000473949 PTPRGP23470 1445 aa35.66■■■■□ 3.3
ARF1-206ENST00000473949 CARMIL2Q6F5E8 1435 aa35.66■■■■□ 3.3
ARF1-206ENST00000473949 IQGAP2Q13576 1575 aa35.65■■■■□ 3.3
ARF1-206ENST00000473949 AEBP2Q6ZN18 517 aaPredicted RBP35.64■■■■□ 3.3
ARF1-206ENST00000473949 TNIKQ9UKE5 1360 aa35.6■■■■□ 3.29
ARF1-206ENST00000473949 RAPGEF2Q9Y4G8 1499 aa35.58■■■■□ 3.29
ARF1-206ENST00000473949 DIP2BQ9P265 1576 aa35.57■■■■□ 3.28
ARF1-206ENST00000473949 DISP1Q96F81 1524 aa35.45■■■■□ 3.27
ARF1-206ENST00000473949 ABCC2Q92887 1545 aa35.43■■■■□ 3.26
ARF1-206ENST00000473949 UGGT2Q9NYU1 1516 aa35.4■■■■□ 3.26
ARF1-206ENST00000473949 UACAQ9BZF9 1416 aa35.38■■■■□ 3.25
ARF1-206ENST00000473949 TSPOAP1O95153 1857 aa35.37■■■■□ 3.25
ARF1-206ENST00000473949 UHRF1BP1LA0JNW5 1464 aa35.35■■■■□ 3.25
ARF1-206ENST00000473949 ASXL2Q76L83 1435 aa35.32■■■■□ 3.25
ARF1-206ENST00000473949 KIAA0556O60303 1618 aa35.32■■■■□ 3.24
ARF1-206ENST00000473949 PLB1Q6P1J6 1458 aa35.3■■■■□ 3.24
ARF1-206ENST00000473949 KDM6BO15054 1643 aa35.28■■■■□ 3.24
ARF1-206ENST00000473949 CTTNBP2Q8WZ74 1663 aa35.28■■■■□ 3.24
ARF1-206ENST00000473949 KDM5BQ9UGL1 1544 aa35.2■■■■□ 3.23
ARF1-206ENST00000473949 PRXQ9BXM0 1461 aa35.19■■■■□ 3.22
ARF1-206ENST00000473949 GLI2P10070 1586 aa35.17■■■■□ 3.22
ARF1-206ENST00000473949 GOLGA3Q08378 1498 aa35.16■■■■□ 3.22
ARF1-206ENST00000473949 ZCCHC11Q5TAX3 1644 aaKnown RBP35.16■■■■□ 3.22
ARF1-206ENST00000473949 EPRSP07814 1512 aaKnown RBP35.09■■■■□ 3.21
ARF1-206ENST00000473949 PPRC1Q5VV67 1664 aaKnown RBP35.07■■■■□ 3.2
ARF1-206ENST00000473949 MAP3K4Q9Y6R4 1608 aa34.99■■■■□ 3.19
ARF1-206ENST00000473949 WDR7Q9Y4E6 1490 aa34.99■■■■□ 3.19
ARF1-206ENST00000473949 CSRNP3Q8WYN3 585 aa34.99■■■■□ 3.19
ARF1-206ENST00000473949 ABCA8O94911 1581 aa34.97■■■■□ 3.19
ARF1-206ENST00000473949 FAM9AQ8IZU1 332 aaPredicted RBP34.94■■■■□ 3.18
ARF1-206ENST00000473949 TEX14Q8IWB6 1497 aa34.94■■■■□ 3.18
ARF1-206ENST00000473949 P3H3Q8IVL6 736 aa34.92■■■■□ 3.18
ARF1-206ENST00000473949 KCNH8Q96L42 1107 aa34.88■■■■□ 3.17
ARF1-206ENST00000473949 KDM4FA0A1W2PPD8 638 aa34.87■■■■□ 3.17
ARF1-206ENST00000473949 COL17A1Q9UMD9 1497 aaPredicted RBP34.84■■■■□ 3.17
ARF1-206ENST00000473949 EEA1Q15075 1411 aa34.83■■■■□ 3.17
ARF1-206ENST00000473949 ARID3CA6NKF2 412 aa34.82■■■■□ 3.16
ARF1-206ENST00000473949 CD109Q6YHK3 1445 aa34.79■■■■□ 3.16
ARF1-206ENST00000473949 CFAP43Q8NDM7 1665 aa34.76■■■■□ 3.16
ARF1-206ENST00000473949 SAMD9Q5K651 1589 aa34.74■■■■□ 3.15
ARF1-206ENST00000473949 RANGAP1P46060 587 aaPredicted RBP34.74■■■■□ 3.15
ARF1-206ENST00000473949 MAGI3Q5TCQ9 1506 aa34.71■■■■□ 3.15
ARF1-206ENST00000473949 ATP10BO94823 1461 aa34.7■■■■□ 3.15
ARF1-206ENST00000473949 RAPGEF6Q8TEU7 1601 aa34.64■■■■□ 3.14
ARF1-206ENST00000473949 ADGRL1O94910 1474 aa34.64■■■■□ 3.14
ARF1-206ENST00000473949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.62■■■■□ 3.13
ARF1-206ENST00000473949 HNRNPUL2Q1KMD3 747 aaKnown RBP34.62■■■■□ 3.13
ARF1-206ENST00000473949 FHOD3Q2V2M9 1422 aa34.58■■■■□ 3.13
ARF1-206ENST00000473949 KIF21BO75037 1637 aa34.54■■■■□ 3.12
ARF1-206ENST00000473949 NUP153P49790 1475 aaKnown RBP34.5■■■■□ 3.11
ARF1-206ENST00000473949 ABCA9Q8IUA7 1624 aa34.49■■■■□ 3.11
ARF1-206ENST00000473949 EHMT2Q96KQ7 1210 aa34.46■■■■□ 3.11
ARF1-206ENST00000473949 EFCAB5A4FU69 1503 aa34.44■■■■□ 3.1
ARF1-206ENST00000473949 ARAP3Q8WWN8 1544 aa34.43■■■■□ 3.1
ARF1-206ENST00000473949 PHLDB1Q86UU1 1377 aa34.38■■■■□ 3.09
ARF1-206ENST00000473949 UBTFP17480 764 aaKnown RBP34.38■■■■□ 3.09
ARF1-206ENST00000473949 CHIC1Q5VXU3 224 aa34.38■■■■□ 3.09
ARF1-206ENST00000473949 PLEKHD1A6NEE1 506 aa34.37■■■■□ 3.09
ARF1-206ENST00000473949 NEO1Q92859 1461 aa34.33■■■■□ 3.09
ARF1-206ENST00000473949 RAPGEF3O95398 923 aa34.3■■■■□ 3.08
ARF1-206ENST00000473949 ATP1B4Q9UN42 357 aaPredicted RBP34.21■■■■□ 3.07
ARF1-206ENST00000473949 CDK13Q14004 1512 aaKnown RBP34.2■■■■□ 3.07
ARF1-206ENST00000473949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.18■■■■□ 3.061e-15■□□□□ 8.1
ARF1-206ENST00000473949 FMN1Q68DA7 1419 aa34.16■■■■□ 3.06
ARF1-206ENST00000473949 FRMPD1Q5SYB0 1578 aa34.15■■■■□ 3.06
ARF1-206ENST00000473949 ARHGAP35Q9NRY4 1499 aa34.14■■■■□ 3.06
ARF1-206ENST00000473949 HECW2Q9P2P5 1572 aa34.14■■■■□ 3.06
ARF1-206ENST00000473949 FANCAO15360 1455 aa34.14■■■■□ 3.06
ARF1-206ENST00000473949 TTC37Q6PGP7 1564 aa34.13■■■■□ 3.05
ARF1-206ENST00000473949 CFAP74Q9C0B2 1584 aa34.13■■■■□ 3.05
ARF1-206ENST00000473949 AKNAQ7Z591 1439 aa34.13■■■■□ 3.05
ARF1-206ENST00000473949 DENND4BO75064 1496 aaPredicted RBP34.11■■■■□ 3.05
ARF1-206ENST00000473949 HECW1Q76N89 1606 aa34.11■■■■□ 3.05
ARF1-206ENST00000473949 ARID4BQ4LE39 1312 aaPredicted RBP34.08■■■■□ 3.05
ARF1-206ENST00000473949 RICTORQ6R327 1708 aa34.04■■■■□ 3.04
ARF1-206ENST00000473949 CDK11AQ9UQ88 783 aaPredicted RBP34.02■■■■□ 3.04
ARF1-206ENST00000473949 ARHGEF40Q8TER5 1519 aa34■■■■□ 3.03
ARF1-206ENST00000473949 ADAMTSL3P82987 1691 aa33.99■■■■□ 3.03
ARF1-206ENST00000473949 PLCH2O75038 1416 aa33.96■■■■□ 3.03
ARF1-206ENST00000473949 BCORL1Q5H9F3 1711 aa33.96■■■■□ 3.03
ARF1-206ENST00000473949 PTPRMP28827 1452 aa33.95■■■■□ 3.03
ARF1-206ENST00000473949 ZMYM4Q5VZL5 1548 aa33.9■■■■□ 3.02
ARF1-206ENST00000473949 SCAPERQ9BY12 1400 aa33.9■■■■□ 3.02
ARF1-206ENST00000473949 MYO5CQ9NQX4 1742 aa33.9■■■■□ 3.02
ARF1-206ENST00000473949 KIF14Q15058 1648 aa33.9■■■■□ 3.02
ARF1-206ENST00000473949 MADDQ8WXG6 1647 aa33.89■■■■□ 3.02
ARF1-206ENST00000473949 ZFYVE16Q7Z3T8 1539 aa33.89■■■■□ 3.02
ARF1-206ENST00000473949 CLIP1P30622 1438 aa33.88■■■■□ 3.01
ARF1-206ENST00000473949 TROQ12816 1431 aaPredicted RBP33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms