RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 JPH4Q96JJ6 628 aa20.75■□□□□ 0.91
SMPD4-217ENST00000473720 IGF1RP08069 1367 aa20.72■□□□□ 0.91
SMPD4-217ENST00000473720 KIF13AQ9H1H9 1805 aa20.68■□□□□ 0.9
SMPD4-217ENST00000473720 KIAA0586Q9BVV6 1533 aa20.63■□□□□ 0.89
SMPD4-217ENST00000473720 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
SMPD4-217ENST00000473720 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
SMPD4-217ENST00000473720 ADCY10Q96PN6 1610 aa20.58■□□□□ 0.89
SMPD4-217ENST00000473720 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMPD4-217ENST00000473720 IQGAP2Q13576 1575 aa20.54■□□□□ 0.88
SMPD4-217ENST00000473720 TSPOAP1O95153 1857 aa20.52■□□□□ 0.88
SMPD4-217ENST00000473720 CARMIL2Q6F5E8 1435 aa20.46■□□□□ 0.87
SMPD4-217ENST00000473720 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
SMPD4-217ENST00000473720 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
SMPD4-217ENST00000473720 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
SMPD4-217ENST00000473720 FAM69CQ0P6D2 419 aa20.45■□□□□ 0.86
SMPD4-217ENST00000473720 PTPRGP23470 1445 aa20.44■□□□□ 0.86
SMPD4-217ENST00000473720 DIP2BQ9P265 1576 aa20.44■□□□□ 0.86
SMPD4-217ENST00000473720 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
SMPD4-217ENST00000473720 TNIKQ9UKE5 1360 aa20.4■□□□□ 0.86
SMPD4-217ENST00000473720 DISP1Q96F81 1524 aa20.37■□□□□ 0.85
SMPD4-217ENST00000473720 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
SMPD4-217ENST00000473720 KIAA0556O60303 1618 aa20.35■□□□□ 0.85
SMPD4-217ENST00000473720 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.85
SMPD4-217ENST00000473720 ABCC2Q92887 1545 aa20.32■□□□□ 0.84
SMPD4-217ENST00000473720 UACAQ9BZF9 1416 aa20.28■□□□□ 0.84
SMPD4-217ENST00000473720 KDM6BO15054 1643 aa20.28■□□□□ 0.84
SMPD4-217ENST00000473720 ZCCHC11Q5TAX3 1644 aaKnown RBP20.28■□□□□ 0.84
SMPD4-217ENST00000473720 ASXL2Q76L83 1435 aa20.27■□□□□ 0.83
SMPD4-217ENST00000473720 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
SMPD4-217ENST00000473720 PLB1Q6P1J6 1458 aa20.22■□□□□ 0.83
SMPD4-217ENST00000473720 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
SMPD4-217ENST00000473720 PPRC1Q5VV67 1664 aaKnown RBP20.22■□□□□ 0.83
SMPD4-217ENST00000473720 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
SMPD4-217ENST00000473720 KDM5BQ9UGL1 1544 aa20.18■□□□□ 0.82
SMPD4-217ENST00000473720 GLI2P10070 1586 aa20.17■□□□□ 0.82
SMPD4-217ENST00000473720 MAP3K4Q9Y6R4 1608 aa20.14■□□□□ 0.81
SMPD4-217ENST00000473720 EPRSP07814 1512 aaKnown RBP20.13■□□□□ 0.81
SMPD4-217ENST00000473720 P3H3Q8IVL6 736 aa20.13■□□□□ 0.81
SMPD4-217ENST00000473720 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
SMPD4-217ENST00000473720 ABCA8O94911 1581 aa20.12■□□□□ 0.81
SMPD4-217ENST00000473720 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
SMPD4-217ENST00000473720 RANGAP1P46060 587 aaPredicted RBP20.08■□□□□ 0.81
SMPD4-217ENST00000473720 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
SMPD4-217ENST00000473720 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
SMPD4-217ENST00000473720 KCNH8Q96L42 1107 aa20.05■□□□□ 0.8
SMPD4-217ENST00000473720 CFAP43Q8NDM7 1665 aa20.04■□□□□ 0.8
SMPD4-217ENST00000473720 SAMD9Q5K651 1589 aa20.03■□□□□ 0.8
SMPD4-217ENST00000473720 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.8
SMPD4-217ENST00000473720 EEA1Q15075 1411 aa20.02■□□□□ 0.79
SMPD4-217ENST00000473720 RAPGEF6Q8TEU7 1601 aa19.99■□□□□ 0.79
SMPD4-217ENST00000473720 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
SMPD4-217ENST00000473720 COL17A1Q9UMD9 1497 aaPredicted RBP19.97■□□□□ 0.79
SMPD4-217ENST00000473720 CD109Q6YHK3 1445 aa19.95■□□□□ 0.78
SMPD4-217ENST00000473720 KIF21BO75037 1637 aa19.94■□□□□ 0.78
SMPD4-217ENST00000473720 KDM4FA0A1W2PPD8 638 aa19.94■□□□□ 0.78
SMPD4-217ENST00000473720 ATP10BO94823 1461 aa19.93■□□□□ 0.78
SMPD4-217ENST00000473720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
SMPD4-217ENST00000473720 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
SMPD4-217ENST00000473720 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
SMPD4-217ENST00000473720 MAGI3Q5TCQ9 1506 aa19.88■□□□□ 0.77
SMPD4-217ENST00000473720 ABCA9Q8IUA7 1624 aa19.86■□□□□ 0.77
SMPD4-217ENST00000473720 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
SMPD4-217ENST00000473720 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
SMPD4-217ENST00000473720 UBTFP17480 764 aaKnown RBP19.83■□□□□ 0.77
SMPD4-217ENST00000473720 NUP153P49790 1475 aaKnown RBP19.83■□□□□ 0.76
SMPD4-217ENST00000473720 EFCAB5A4FU69 1503 aa19.82■□□□□ 0.76
SMPD4-217ENST00000473720 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
SMPD4-217ENST00000473720 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
SMPD4-217ENST00000473720 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
SMPD4-217ENST00000473720 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
SMPD4-217ENST00000473720 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
SMPD4-217ENST00000473720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
SMPD4-217ENST00000473720 RAPGEF3O95398 923 aa19.68■□□□□ 0.74
SMPD4-217ENST00000473720 HECW1Q76N89 1606 aa19.68■□□□□ 0.74
SMPD4-217ENST00000473720 NEO1Q92859 1461 aa19.67■□□□□ 0.74
SMPD4-217ENST00000473720 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
SMPD4-217ENST00000473720 ARHGAP35Q9NRY4 1499 aa19.67■□□□□ 0.74
SMPD4-217ENST00000473720 CFAP74Q9C0B2 1584 aa19.66■□□□□ 0.74
SMPD4-217ENST00000473720 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
SMPD4-217ENST00000473720 PHLDB1Q86UU1 1377 aa19.65■□□□□ 0.74
SMPD4-217ENST00000473720 RICTORQ6R327 1708 aa19.65■□□□□ 0.74
SMPD4-217ENST00000473720 FMN1Q68DA7 1419 aa19.63■□□□□ 0.73
SMPD4-217ENST00000473720 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
SMPD4-217ENST00000473720 FANCAO15360 1455 aa19.61■□□□□ 0.73
SMPD4-217ENST00000473720 HECW2Q9P2P5 1572 aa19.59■□□□□ 0.73
SMPD4-217ENST00000473720 AKNAQ7Z591 1439 aa19.59■□□□□ 0.73
SMPD4-217ENST00000473720 DENND4BO75064 1496 aaPredicted RBP19.57■□□□□ 0.72
SMPD4-217ENST00000473720 KIF14Q15058 1648 aa19.57■□□□□ 0.72
SMPD4-217ENST00000473720 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
SMPD4-217ENST00000473720 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
SMPD4-217ENST00000473720 ADAMTSL3P82987 1691 aa19.56■□□□□ 0.72
SMPD4-217ENST00000473720 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
SMPD4-217ENST00000473720 ARHGEF40Q8TER5 1519 aa19.53■□□□□ 0.72
SMPD4-217ENST00000473720 CDK11AQ9UQ88 783 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-217ENST00000473720 MADDQ8WXG6 1647 aa19.51■□□□□ 0.71
SMPD4-217ENST00000473720 RIMS1Q86UR5 1692 aaKnown RBP19.51■□□□□ 0.71
SMPD4-217ENST00000473720 CDC42BPBQ9Y5S2 1711 aa19.49■□□□□ 0.71
SMPD4-217ENST00000473720 PLCH2O75038 1416 aa19.49■□□□□ 0.71
SMPD4-217ENST00000473720 SIGLEC1Q9BZZ2 1709 aa19.48■□□□□ 0.71
SMPD4-217ENST00000473720 ZFYVE16Q7Z3T8 1539 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms