RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 JPH4Q96JJ6 628 aa38.54■■■■□ 3.76
PTP4A1-203ENST00000473334 PRG4Q92954 1404 aaPredicted RBP38.53■■■■□ 3.76
PTP4A1-203ENST00000473334 KIAA0586Q9BVV6 1533 aa38.5■■■■□ 3.75
PTP4A1-203ENST00000473334 TRHP20396 242 aaPredicted RBP38.35■■■■□ 3.73
PTP4A1-203ENST00000473334 RAPGEF2Q9Y4G8 1499 aa38.33■■■■□ 3.73
PTP4A1-203ENST00000473334 IQGAP2Q13576 1575 aa38.26■■■■□ 3.72
PTP4A1-203ENST00000473334 CARMIL2Q6F5E8 1435 aa38.11■■■■□ 3.69
PTP4A1-203ENST00000473334 PRXQ9BXM0 1461 aa38.09■■■■□ 3.69
PTP4A1-203ENST00000473334 CTTNBP2Q8WZ74 1663 aa38.05■■■■□ 3.68
PTP4A1-203ENST00000473334 ADCY10Q96PN6 1610 aa38.04■■■■□ 3.68
PTP4A1-203ENST00000473334 UGGT2Q9NYU1 1516 aa38.02■■■■□ 3.68
PTP4A1-203ENST00000473334 TNIKQ9UKE5 1360 aa38.01■■■■□ 3.68
PTP4A1-203ENST00000473334 PTPRGP23470 1445 aa38■■■■□ 3.67
PTP4A1-203ENST00000473334 DISP1Q96F81 1524 aa38■■■■□ 3.67
PTP4A1-203ENST00000473334 EEA1Q15075 1411 aa37.94■■■■□ 3.66
PTP4A1-203ENST00000473334 NPM1P06748 294 aaKnown RBP eCLIP37.92■■■■□ 3.66
PTP4A1-203ENST00000473334 CSRNP3Q8WYN3 585 aa37.91■■■■□ 3.66
PTP4A1-203ENST00000473334 KIAA0556O60303 1618 aa37.9■■■■□ 3.66
PTP4A1-203ENST00000473334 TTBK1Q5TCY1 1321 aaPredicted RBP37.88■■■■□ 3.66
PTP4A1-203ENST00000473334 MAPKBP1O60336 1514 aa37.88■■■■□ 3.65
PTP4A1-203ENST00000473334 KIF13AQ9H1H9 1805 aa37.84■■■■□ 3.65
PTP4A1-203ENST00000473334 GOLGA3Q08378 1498 aa37.77■■■■□ 3.64
PTP4A1-203ENST00000473334 CHIC1Q5VXU3 224 aa37.76■■■■□ 3.64
PTP4A1-203ENST00000473334 UHRF1BP1LA0JNW5 1464 aa37.76■■■■□ 3.63
PTP4A1-203ENST00000473334 UACAQ9BZF9 1416 aa37.75■■■■□ 3.63
PTP4A1-203ENST00000473334 ABCC2Q92887 1545 aa37.75■■■■□ 3.63
PTP4A1-203ENST00000473334 ABCC10Q5T3U5 1492 aa37.74■■■■□ 3.63
PTP4A1-203ENST00000473334 DIP2BQ9P265 1576 aa37.7■■■■□ 3.63
PTP4A1-203ENST00000473334 FAM9AQ8IZU1 332 aaPredicted RBP37.67■■■■□ 3.62
PTP4A1-203ENST00000473334 FAM69CQ0P6D2 419 aa37.63■■■■□ 3.61
PTP4A1-203ENST00000473334 KIF21BO75037 1637 aa37.6■■■■□ 3.61
PTP4A1-203ENST00000473334 KDM5BQ9UGL1 1544 aa37.58■■■■□ 3.61
PTP4A1-203ENST00000473334 ASXL2Q76L83 1435 aa37.54■■■■□ 3.6
PTP4A1-203ENST00000473334 PLB1Q6P1J6 1458 aa37.53■■■■□ 3.6
PTP4A1-203ENST00000473334 ZCCHC11Q5TAX3 1644 aaKnown RBP37.53■■■■□ 3.6
PTP4A1-203ENST00000473334 SAMD9Q5K651 1589 aa37.51■■■■□ 3.6
PTP4A1-203ENST00000473334 ABCA8O94911 1581 aa37.51■■■■□ 3.59
PTP4A1-203ENST00000473334 P3H3Q8IVL6 736 aa37.42■■■■□ 3.58
PTP4A1-203ENST00000473334 GLI2P10070 1586 aa37.4■■■■□ 3.58
PTP4A1-203ENST00000473334 TSPOAP1O95153 1857 aa37.39■■■■□ 3.58
PTP4A1-203ENST00000473334 EPRSP07814 1512 aaKnown RBP37.33■■■■□ 3.57
PTP4A1-203ENST00000473334 WDR7Q9Y4E6 1490 aa37.3■■■■□ 3.56
PTP4A1-203ENST00000473334 RANGAP1P46060 587 aaPredicted RBP37.29■■■■□ 3.56
PTP4A1-203ENST00000473334 EFCAB5A4FU69 1503 aa37.26■■■■□ 3.56
PTP4A1-203ENST00000473334 FHOD3Q2V2M9 1422 aa37.24■■■■□ 3.55
PTP4A1-203ENST00000473334 RAPGEF6Q8TEU7 1601 aa37.24■■■■□ 3.55
PTP4A1-203ENST00000473334 PPRC1Q5VV67 1664 aaKnown RBP37.24■■■■□ 3.55
PTP4A1-203ENST00000473334 MAP3K4Q9Y6R4 1608 aa37.23■■■■□ 3.55
PTP4A1-203ENST00000473334 UBTFP17480 764 aaKnown RBP37.21■■■■□ 3.55
PTP4A1-203ENST00000473334 EHMT2Q96KQ7 1210 aa37.21■■■■□ 3.55
PTP4A1-203ENST00000473334 KDM6BO15054 1643 aa37.2■■■■□ 3.55
PTP4A1-203ENST00000473334 ATP10BO94823 1461 aa37.16■■■■□ 3.54
PTP4A1-203ENST00000473334 ARID3CA6NKF2 412 aa37.11■■■■□ 3.53
PTP4A1-203ENST00000473334 CFAP43Q8NDM7 1665 aa37.07■■■■□ 3.52
PTP4A1-203ENST00000473334 NUP153P49790 1475 aaKnown RBP37.07■■■■□ 3.52
PTP4A1-203ENST00000473334 TEX14Q8IWB6 1497 aa37.07■■■■□ 3.52
PTP4A1-203ENST00000473334 KCNH8Q96L42 1107 aa37.05■■■■□ 3.52
PTP4A1-203ENST00000473334 ARHGAP35Q9NRY4 1499 aa36.99■■■■□ 3.51
PTP4A1-203ENST00000473334 CD109Q6YHK3 1445 aa36.98■■■■□ 3.51
PTP4A1-203ENST00000473334 MAGI3Q5TCQ9 1506 aa36.95■■■■□ 3.51
PTP4A1-203ENST00000473334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.95■■■■□ 3.51
PTP4A1-203ENST00000473334 HNRNPUL2Q1KMD3 747 aaKnown RBP36.95■■■■□ 3.51
PTP4A1-203ENST00000473334 FMN1Q68DA7 1419 aa36.9■■■■□ 3.5
PTP4A1-203ENST00000473334 ABCA9Q8IUA7 1624 aa36.88■■■■□ 3.5
PTP4A1-203ENST00000473334 COL17A1Q9UMD9 1497 aaPredicted RBP36.87■■■■□ 3.49
PTP4A1-203ENST00000473334 HECW1Q76N89 1606 aa36.81■■■■□ 3.48
PTP4A1-203ENST00000473334 PLEKHD1A6NEE1 506 aa36.78■■■■□ 3.48
PTP4A1-203ENST00000473334 CDK13Q14004 1512 aaKnown RBP36.78■■■■□ 3.48
PTP4A1-203ENST00000473334 AEBP2Q6ZN18 517 aaPredicted RBP36.74■■■■□ 3.47
PTP4A1-203ENST00000473334 ATP1B4Q9UN42 357 aaPredicted RBP36.69■■■■□ 3.46
PTP4A1-203ENST00000473334 ARAP3Q8WWN8 1544 aa36.64■■■■□ 3.46
PTP4A1-203ENST00000473334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.63■■■■□ 3.453e-6■■■□□ 16.7
PTP4A1-203ENST00000473334 PHLDB1Q86UU1 1377 aa36.63■■■■□ 3.45
PTP4A1-203ENST00000473334 CLIP1P30622 1438 aa36.62■■■■□ 3.45
PTP4A1-203ENST00000473334 NEO1Q92859 1461 aa36.62■■■■□ 3.45
PTP4A1-203ENST00000473334 LRRIQ1Q96JM4 1722 aa36.6■■■■□ 3.45
PTP4A1-203ENST00000473334 PCF11O94913 1555 aaKnown RBP36.59■■■■□ 3.45
PTP4A1-203ENST00000473334 TTC37Q6PGP7 1564 aa36.59■■■■□ 3.45
PTP4A1-203ENST00000473334 CASKIN1Q8WXD9 1431 aa36.56■■■■□ 3.44
PTP4A1-203ENST00000473334 CDK11AQ9UQ88 783 aaPredicted RBP36.55■■■■□ 3.44
PTP4A1-203ENST00000473334 CFAP74Q9C0B2 1584 aa36.51■■■■□ 3.44
PTP4A1-203ENST00000473334 CCDC18Q5T9S5 1454 aa36.49■■■■□ 3.43
PTP4A1-203ENST00000473334 FYCO1Q9BQS8 1478 aa36.48■■■■□ 3.43
PTP4A1-203ENST00000473334 KDM4FA0A1W2PPD8 638 aa36.47■■■■□ 3.43
PTP4A1-203ENST00000473334 FANCAO15360 1455 aa36.46■■■■□ 3.43
PTP4A1-203ENST00000473334 TROQ12816 1431 aaPredicted RBP36.46■■■■□ 3.43
PTP4A1-203ENST00000473334 KIF14Q15058 1648 aa36.45■■■■□ 3.43
PTP4A1-203ENST00000473334 AKNAQ7Z591 1439 aa36.41■■■■□ 3.42
PTP4A1-203ENST00000473334 FRMPD1Q5SYB0 1578 aa36.4■■■■□ 3.42
PTP4A1-203ENST00000473334 MYO5CQ9NQX4 1742 aa36.39■■■■□ 3.42
PTP4A1-203ENST00000473334 ADGRL1O94910 1474 aa36.39■■■■□ 3.42
PTP4A1-203ENST00000473334 PLCH2O75038 1416 aa36.39■■■■□ 3.42
PTP4A1-203ENST00000473334 RAPGEF3O95398 923 aa36.38■■■■□ 3.41
PTP4A1-203ENST00000473334 CEP162Q5TB80 1403 aa36.36■■■■□ 3.41
PTP4A1-203ENST00000473334 DENND4BO75064 1496 aaPredicted RBP36.35■■■■□ 3.41
PTP4A1-203ENST00000473334 RICTORQ6R327 1708 aa36.34■■■■□ 3.41
PTP4A1-203ENST00000473334 EFCAB2Q5VUJ9 269 aa36.22■■■■□ 3.39
PTP4A1-203ENST00000473334 ARHGAP5Q13017 1502 aa36.21■■■■□ 3.39
PTP4A1-203ENST00000473334 ZMYM4Q5VZL5 1548 aa36.2■■■■□ 3.39
PTP4A1-203ENST00000473334 SCAPERQ9BY12 1400 aa36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms