RNA–Protein interactions for RNA: ENST00000473146.5

SLC6A20-206, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best)

Gene SLC6A20, Length 2,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-206ENST00000473146 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
SLC6A20-206ENST00000473146 CTTNBP2Q8WZ74 1663 aa19.89■□□□□ 0.77
SLC6A20-206ENST00000473146 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
SLC6A20-206ENST00000473146 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
SLC6A20-206ENST00000473146 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
SLC6A20-206ENST00000473146 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
SLC6A20-206ENST00000473146 MAGI1Q96QZ7 1491 aaPredicted RBP19.84■□□□□ 0.77
SLC6A20-206ENST00000473146 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.77
SLC6A20-206ENST00000473146 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
SLC6A20-206ENST00000473146 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
SLC6A20-206ENST00000473146 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
SLC6A20-206ENST00000473146 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
SLC6A20-206ENST00000473146 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
SLC6A20-206ENST00000473146 FBLN2P98095 1184 aa19.72■□□□□ 0.75
SLC6A20-206ENST00000473146 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
SLC6A20-206ENST00000473146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
SLC6A20-206ENST00000473146 SAMD9Q5K651 1589 aa19.69■□□□□ 0.74
SLC6A20-206ENST00000473146 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
SLC6A20-206ENST00000473146 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
SLC6A20-206ENST00000473146 KIAA0586Q9BVV6 1533 aa19.67■□□□□ 0.74
SLC6A20-206ENST00000473146 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
SLC6A20-206ENST00000473146 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
SLC6A20-206ENST00000473146 APLP2Q06481 763 aa19.64■□□□□ 0.73
SLC6A20-206ENST00000473146 NUP160Q12769 1436 aa19.63■□□□□ 0.73
SLC6A20-206ENST00000473146 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
SLC6A20-206ENST00000473146 CHD1O14646 1710 aa19.59■□□□□ 0.73
SLC6A20-206ENST00000473146 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
SLC6A20-206ENST00000473146 FMN1Q68DA7 1419 aa19.57■□□□□ 0.72
SLC6A20-206ENST00000473146 DISP1Q96F81 1524 aa19.54■□□□□ 0.72
SLC6A20-206ENST00000473146 ACIN1Q9UKV3 1341 aaKnown RBP19.53■□□□□ 0.72
SLC6A20-206ENST00000473146 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
SLC6A20-206ENST00000473146 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
SLC6A20-206ENST00000473146 KIAA0556O60303 1618 aa19.52■□□□□ 0.71
SLC6A20-206ENST00000473146 FYCO1Q9BQS8 1478 aa19.52■□□□□ 0.71
SLC6A20-206ENST00000473146 JPH4Q96JJ6 628 aa19.5■□□□□ 0.71
SLC6A20-206ENST00000473146 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
SLC6A20-206ENST00000473146 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
SLC6A20-206ENST00000473146 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
SLC6A20-206ENST00000473146 MAP3K1Q13233 1512 aa19.48■□□□□ 0.71
SLC6A20-206ENST00000473146 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
SLC6A20-206ENST00000473146 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
SLC6A20-206ENST00000473146 LRRIQ1Q96JM4 1722 aa19.42■□□□□ 0.7
SLC6A20-206ENST00000473146 CARMIL2Q6F5E8 1435 aa19.41■□□□□ 0.7
SLC6A20-206ENST00000473146 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
SLC6A20-206ENST00000473146 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
SLC6A20-206ENST00000473146 PRG4Q92954 1404 aaPredicted RBP19.37■□□□□ 0.69
SLC6A20-206ENST00000473146 HECW1Q76N89 1606 aa19.36■□□□□ 0.69
SLC6A20-206ENST00000473146 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
SLC6A20-206ENST00000473146 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
SLC6A20-206ENST00000473146 GTF3C3Q9Y5Q9 886 aa19.34■□□□□ 0.69
SLC6A20-206ENST00000473146 CCDC18Q5T9S5 1454 aa19.32■□□□□ 0.68
SLC6A20-206ENST00000473146 EPRSP07814 1512 aaKnown RBP19.32■□□□□ 0.68
SLC6A20-206ENST00000473146 RAPGEF6Q8TEU7 1601 aa19.31■□□□□ 0.68
SLC6A20-206ENST00000473146 PLB1Q6P1J6 1458 aa19.3■□□□□ 0.68
SLC6A20-206ENST00000473146 NUP153P49790 1475 aaKnown RBP19.29■□□□□ 0.68
SLC6A20-206ENST00000473146 CDK13Q14004 1512 aaKnown RBP19.28■□□□□ 0.68
SLC6A20-206ENST00000473146 ARID3CA6NKF2 412 aa19.28■□□□□ 0.68
SLC6A20-206ENST00000473146 MTUS2Q5JR59 1369 aa19.28■□□□□ 0.68
SLC6A20-206ENST00000473146 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
SLC6A20-206ENST00000473146 MAGI3Q5TCQ9 1506 aa19.25■□□□□ 0.67
SLC6A20-206ENST00000473146 RRBP1Q9P2E9 1410 aaKnown RBP19.25■□□□□ 0.67
SLC6A20-206ENST00000473146 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
SLC6A20-206ENST00000473146 PTPRGP23470 1445 aa19.24■□□□□ 0.67
SLC6A20-206ENST00000473146 ABCA8O94911 1581 aa19.23■□□□□ 0.67
SLC6A20-206ENST00000473146 EHBP1L1Q8N3D4 1523 aa19.22■□□□□ 0.67
SLC6A20-206ENST00000473146 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
SLC6A20-206ENST00000473146 CCNB3Q8WWL7 1395 aa19.2■□□□□ 0.66
SLC6A20-206ENST00000473146 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
SLC6A20-206ENST00000473146 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
SLC6A20-206ENST00000473146 SUPT6HQ7KZ85 1726 aaKnown RBP19.18■□□□□ 0.66
SLC6A20-206ENST00000473146 NCOA2Q15596 1464 aa19.17■□□□□ 0.66
SLC6A20-206ENST00000473146 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
SLC6A20-206ENST00000473146 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
SLC6A20-206ENST00000473146 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
SLC6A20-206ENST00000473146 ATP10BO94823 1461 aa19.12■□□□□ 0.65
SLC6A20-206ENST00000473146 MYOM3Q5VTT5 1437 aa19.09■□□□□ 0.65
SLC6A20-206ENST00000473146 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
SLC6A20-206ENST00000473146 YTHDC1Q96MU7 727 aaKnown RBP19.09■□□□□ 0.65
SLC6A20-206ENST00000473146 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.64
SLC6A20-206ENST00000473146 FAM50AQ14320 339 aaKnown RBP19.07■□□□□ 0.64
SLC6A20-206ENST00000473146 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
SLC6A20-206ENST00000473146 ITGAEP38570 1179 aa19.05■□□□□ 0.64
SLC6A20-206ENST00000473146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.03■□□□□ 0.64
SLC6A20-206ENST00000473146 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
SLC6A20-206ENST00000473146 KIF14Q15058 1648 aa19.01■□□□□ 0.63
SLC6A20-206ENST00000473146 ADCY10Q96PN6 1610 aa19.01■□□□□ 0.63
SLC6A20-206ENST00000473146 UHRF1BP1LA0JNW5 1464 aa19.01■□□□□ 0.63
SLC6A20-206ENST00000473146 MIER1Q8N108 512 aa19■□□□□ 0.63
SLC6A20-206ENST00000473146 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
SLC6A20-206ENST00000473146 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
SLC6A20-206ENST00000473146 ZCCHC11Q5TAX3 1644 aaKnown RBP18.95■□□□□ 0.62
SLC6A20-206ENST00000473146 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
SLC6A20-206ENST00000473146 TCOF1Q13428 1488 aaKnown RBP18.95■□□□□ 0.62
SLC6A20-206ENST00000473146 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
SLC6A20-206ENST00000473146 ABCC10Q5T3U5 1492 aa18.92■□□□□ 0.62
SLC6A20-206ENST00000473146 MYT1Q01538 1121 aa18.92■□□□□ 0.62
SLC6A20-206ENST00000473146 ITSN2Q9NZM3 1697 aa18.91■□□□□ 0.62
SLC6A20-206ENST00000473146 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
SLC6A20-206ENST00000473146 CDC42BPAQ5VT25 1732 aa18.89■□□□□ 0.61
SLC6A20-206ENST00000473146 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms