RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 PRG4Q92954 1404 aaPredicted RBP35.77■■■■□ 3.32
EPHB3-202ENST00000473079 RUSC2Q8N2Y8 1516 aa35.77■■■■□ 3.32
EPHB3-202ENST00000473079 CARMIL1Q5VZK9 1371 aa35.72■■■■□ 3.31
EPHB3-202ENST00000473079 KIAA0586Q9BVV6 1533 aa35.71■■■■□ 3.31
EPHB3-202ENST00000473079 RAPGEF2Q9Y4G8 1499 aa35.43■■■■□ 3.26
EPHB3-202ENST00000473079 IQGAP2Q13576 1575 aa35.35■■■■□ 3.25
EPHB3-202ENST00000473079 CARMIL2Q6F5E8 1435 aa35.33■■■■□ 3.25
EPHB3-202ENST00000473079 NPM1P06748 294 aaKnown RBP eCLIP35.31■■■■□ 3.24
EPHB3-202ENST00000473079 PTPRGP23470 1445 aa35.29■■■■□ 3.24
EPHB3-202ENST00000473079 TNIKQ9UKE5 1360 aa35.26■■■■□ 3.24
EPHB3-202ENST00000473079 ADCY10Q96PN6 1610 aa35.26■■■■□ 3.24
EPHB3-202ENST00000473079 MAPKBP1O60336 1514 aa35.21■■■■□ 3.23
EPHB3-202ENST00000473079 DISP1Q96F81 1524 aa35.19■■■■□ 3.22
EPHB3-202ENST00000473079 PRXQ9BXM0 1461 aa35.19■■■■□ 3.22
EPHB3-202ENST00000473079 UGGT2Q9NYU1 1516 aa35.19■■■■□ 3.22
EPHB3-202ENST00000473079 ABCC10Q5T3U5 1492 aa35.13■■■■□ 3.21
EPHB3-202ENST00000473079 KIF13AQ9H1H9 1805 aa35.11■■■■□ 3.21
EPHB3-202ENST00000473079 TTBK1Q5TCY1 1321 aaPredicted RBP35.09■■■■□ 3.21
EPHB3-202ENST00000473079 UHRF1BP1LA0JNW5 1464 aa35.06■■■■□ 3.2
EPHB3-202ENST00000473079 FAM69CQ0P6D2 419 aa35.06■■■■□ 3.2
EPHB3-202ENST00000473079 ABCC2Q92887 1545 aa35.04■■■■□ 3.2
EPHB3-202ENST00000473079 CSRNP3Q8WYN3 585 aa35.03■■■■□ 3.2
EPHB3-202ENST00000473079 UACAQ9BZF9 1416 aa35.03■■■■□ 3.2
EPHB3-202ENST00000473079 CTTNBP2Q8WZ74 1663 aa35.02■■■■□ 3.2
EPHB3-202ENST00000473079 KIAA0556O60303 1618 aa35.02■■■■□ 3.2
EPHB3-202ENST00000473079 DIP2BQ9P265 1576 aa35■■■■□ 3.19
EPHB3-202ENST00000473079 EEA1Q15075 1411 aa34.96■■■■□ 3.19
EPHB3-202ENST00000473079 GOLGA3Q08378 1498 aa34.96■■■■□ 3.19
EPHB3-202ENST00000473079 KDM5BQ9UGL1 1544 aa34.88■■■■□ 3.17
EPHB3-202ENST00000473079 PLB1Q6P1J6 1458 aa34.88■■■■□ 3.17
EPHB3-202ENST00000473079 ASXL2Q76L83 1435 aa34.86■■■■□ 3.17
EPHB3-202ENST00000473079 GLI2P10070 1586 aa34.75■■■■□ 3.15
EPHB3-202ENST00000473079 ZCCHC11Q5TAX3 1644 aaKnown RBP34.72■■■■□ 3.15
EPHB3-202ENST00000473079 ABCA8O94911 1581 aa34.71■■■■□ 3.15
EPHB3-202ENST00000473079 CHIC1Q5VXU3 224 aa34.71■■■■□ 3.15
EPHB3-202ENST00000473079 FAM9AQ8IZU1 332 aaPredicted RBP34.68■■■■□ 3.14
EPHB3-202ENST00000473079 EPRSP07814 1512 aaKnown RBP34.65■■■■□ 3.14
EPHB3-202ENST00000473079 SAMD9Q5K651 1589 aa34.62■■■■□ 3.13
EPHB3-202ENST00000473079 TSPOAP1O95153 1857 aa34.61■■■■□ 3.13
EPHB3-202ENST00000473079 P3H3Q8IVL6 736 aa34.61■■■■□ 3.13
EPHB3-202ENST00000473079 KIF21BO75037 1637 aa34.59■■■■□ 3.13
EPHB3-202ENST00000473079 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
EPHB3-202ENST00000473079 KDM6BO15054 1643 aa34.57■■■■□ 3.12
EPHB3-202ENST00000473079 PPRC1Q5VV67 1664 aaKnown RBP34.53■■■■□ 3.12
EPHB3-202ENST00000473079 MAP3K4Q9Y6R4 1608 aa34.52■■■■□ 3.12
EPHB3-202ENST00000473079 AEBP2Q6ZN18 517 aaPredicted RBP34.45■■■■□ 3.11
EPHB3-202ENST00000473079 ATP10BO94823 1461 aa34.45■■■■□ 3.1
EPHB3-202ENST00000473079 TEX14Q8IWB6 1497 aa34.44■■■■□ 3.1
EPHB3-202ENST00000473079 RANGAP1P46060 587 aaPredicted RBP34.4■■■■□ 3.1
EPHB3-202ENST00000473079 KCNH8Q96L42 1107 aa34.4■■■■□ 3.1
EPHB3-202ENST00000473079 RAPGEF6Q8TEU7 1601 aa34.37■■■■□ 3.09
EPHB3-202ENST00000473079 EFCAB5A4FU69 1503 aa34.37■■■■□ 3.09
EPHB3-202ENST00000473079 FHOD3Q2V2M9 1422 aa34.37■■■■□ 3.09
EPHB3-202ENST00000473079 CD109Q6YHK3 1445 aa34.35■■■■□ 3.09
EPHB3-202ENST00000473079 ARID3CA6NKF2 412 aa34.34■■■■□ 3.09
EPHB3-202ENST00000473079 MAGI3Q5TCQ9 1506 aa34.33■■■■□ 3.09
EPHB3-202ENST00000473079 CFAP43Q8NDM7 1665 aa34.32■■■■□ 3.08
EPHB3-202ENST00000473079 UBTFP17480 764 aaKnown RBP34.32■■■■□ 3.08
EPHB3-202ENST00000473079 COL17A1Q9UMD9 1497 aaPredicted RBP34.32■■■■□ 3.08
EPHB3-202ENST00000473079 NUP153P49790 1475 aaKnown RBP34.29■■■■□ 3.08
EPHB3-202ENST00000473079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.21■■■■□ 3.07
EPHB3-202ENST00000473079 HNRNPUL2Q1KMD3 747 aaKnown RBP34.21■■■■□ 3.07
EPHB3-202ENST00000473079 EHMT2Q96KQ7 1210 aa34.21■■■■□ 3.07
EPHB3-202ENST00000473079 ABCA9Q8IUA7 1624 aa34.15■■■■□ 3.06
EPHB3-202ENST00000473079 PLEKHD1A6NEE1 506 aa34.12■■■■□ 3.05
EPHB3-202ENST00000473079 KDM4FA0A1W2PPD8 638 aa34.11■■■■□ 3.05
EPHB3-202ENST00000473079 ARHGAP35Q9NRY4 1499 aa34.11■■■■□ 3.05
EPHB3-202ENST00000473079 PHLDB1Q86UU1 1377 aa34.09■■■■□ 3.05
EPHB3-202ENST00000473079 FMN1Q68DA7 1419 aa34.08■■■■□ 3.05
EPHB3-202ENST00000473079 ARAP3Q8WWN8 1544 aa34.06■■■■□ 3.04
EPHB3-202ENST00000473079 NEO1Q92859 1461 aa33.99■■■■□ 3.03
EPHB3-202ENST00000473079 CDK13Q14004 1512 aaKnown RBP33.94■■■■□ 3.02
EPHB3-202ENST00000473079 HECW1Q76N89 1606 aa33.92■■■■□ 3.02
EPHB3-202ENST00000473079 ADGRL1O94910 1474 aa33.89■■■■□ 3.02
EPHB3-202ENST00000473079 ATP1B4Q9UN42 357 aaPredicted RBP33.89■■■■□ 3.02
EPHB3-202ENST00000473079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.89■■■■□ 3.02
EPHB3-202ENST00000473079 CDK11AQ9UQ88 783 aaPredicted RBP33.86■■■■□ 3.01
EPHB3-202ENST00000473079 RAPGEF3O95398 923 aa33.82■■■■□ 3
EPHB3-202ENST00000473079 TTC37Q6PGP7 1564 aa33.8■■■■□ 3
EPHB3-202ENST00000473079 FANCAO15360 1455 aa33.78■■■■□ 3
EPHB3-202ENST00000473079 AKNAQ7Z591 1439 aa33.78■■■■□ 3
EPHB3-202ENST00000473079 CASKIN1Q8WXD9 1431 aa33.76■■■□□ 2.99
EPHB3-202ENST00000473079 CFAP74Q9C0B2 1584 aa33.75■■■□□ 2.99
EPHB3-202ENST00000473079 PLCH2O75038 1416 aa33.74■■■□□ 2.99
EPHB3-202ENST00000473079 DENND4BO75064 1496 aaPredicted RBP33.72■■■□□ 2.99
EPHB3-202ENST00000473079 FRMPD1Q5SYB0 1578 aa33.72■■■□□ 2.99
EPHB3-202ENST00000473079 CLIP1P30622 1438 aa33.71■■■□□ 2.99
EPHB3-202ENST00000473079 TROQ12816 1431 aaPredicted RBP33.71■■■□□ 2.99
EPHB3-202ENST00000473079 CCDC18Q5T9S5 1454 aa33.66■■■□□ 2.98
EPHB3-202ENST00000473079 LRRIQ1Q96JM4 1722 aa33.66■■■□□ 2.98
EPHB3-202ENST00000473079 PCF11O94913 1555 aaKnown RBP33.65■■■□□ 2.98
EPHB3-202ENST00000473079 RICTORQ6R327 1708 aa33.62■■■□□ 2.97
EPHB3-202ENST00000473079 KIF14Q15058 1648 aa33.62■■■□□ 2.97
EPHB3-202ENST00000473079 EFCAB2Q5VUJ9 269 aa33.62■■■□□ 2.97
EPHB3-202ENST00000473079 FYCO1Q9BQS8 1478 aa33.62■■■□□ 2.97
EPHB3-202ENST00000473079 MYO5CQ9NQX4 1742 aa33.57■■■□□ 2.96
EPHB3-202ENST00000473079 SCAPERQ9BY12 1400 aa33.57■■■□□ 2.96
EPHB3-202ENST00000473079 ZMYM4Q5VZL5 1548 aa33.56■■■□□ 2.96
EPHB3-202ENST00000473079 MAGI2Q86UL8 1455 aa33.54■■■□□ 2.96
EPHB3-202ENST00000473079 ARHGEF40Q8TER5 1519 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms