RNA–Protein interactions for RNA: ENST00000472823.5

GABBR1-208, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 4,286 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-208ENST00000472823 FBLN2P98095 1184 aa25.5■■□□□ 1.67
GABBR1-208ENST00000472823 CCDC136Q96JN2 1154 aa25.47■■□□□ 1.67
GABBR1-208ENST00000472823 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
GABBR1-208ENST00000472823 RAPGEF2Q9Y4G8 1499 aa25.43■■□□□ 1.66
GABBR1-208ENST00000472823 NBR1Q14596 966 aa25.4■■□□□ 1.66
GABBR1-208ENST00000472823 TMC1Q8TDI8 760 aa25.4■■□□□ 1.66
GABBR1-208ENST00000472823 SALL2Q9Y467 1007 aaPredicted RBP25.4■■□□□ 1.66
GABBR1-208ENST00000472823 RAB3GAP2Q9H2M9 1393 aa25.39■■□□□ 1.66
GABBR1-208ENST00000472823 DHX57Q6P158 1386 aaKnown RBP25.39■■□□□ 1.65
GABBR1-208ENST00000472823 SETD5Q9C0A6 1442 aa25.39■■□□□ 1.65
GABBR1-208ENST00000472823 TSHZ2Q9NRE2 1034 aa25.38■■□□□ 1.65
GABBR1-208ENST00000472823 TIMELESSQ9UNS1 1208 aa25.36■■□□□ 1.65
GABBR1-208ENST00000472823 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
GABBR1-208ENST00000472823 CCER2I3L3R5 266 aa25.32■■□□□ 1.64
GABBR1-208ENST00000472823 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
GABBR1-208ENST00000472823 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
GABBR1-208ENST00000472823 CUX2O14529 1486 aa25.31■■□□□ 1.64
GABBR1-208ENST00000472823 ZBTB47Q9UFB7 747 aaPredicted RBP25.3■■□□□ 1.64
GABBR1-208ENST00000472823 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
GABBR1-208ENST00000472823 KCNH8Q96L42 1107 aa25.27■■□□□ 1.64
GABBR1-208ENST00000472823 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
GABBR1-208ENST00000472823 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
GABBR1-208ENST00000472823 PPP4R2Q9NY27 417 aa25.22■■□□□ 1.63
GABBR1-208ENST00000472823 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
GABBR1-208ENST00000472823 CANXP27824 592 aaKnown RBP25.18■■□□□ 1.62
GABBR1-208ENST00000472823 PPP1R15AO75807 674 aaPredicted RBP25.17■■□□□ 1.62
GABBR1-208ENST00000472823 B4GALNT3Q6L9W6 998 aa25.15■■□□□ 1.62
GABBR1-208ENST00000472823 ARHGAP35Q9NRY4 1499 aa25.13■■□□□ 1.61
GABBR1-208ENST00000472823 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.61
GABBR1-208ENST00000472823 HSPA5P11021 654 aaKnown RBP25.08■■□□□ 1.61
GABBR1-208ENST00000472823 TSPY4P0CV99 314 aa25.08■■□□□ 1.6
GABBR1-208ENST00000472823 TSPY10P0CW01 314 aa25.08■■□□□ 1.6
GABBR1-208ENST00000472823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.02■■□□□ 1.6
GABBR1-208ENST00000472823 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
GABBR1-208ENST00000472823 KIF21BO75037 1637 aa25■■□□□ 1.59
GABBR1-208ENST00000472823 NOP58Q9Y2X3 529 aaKnown RBP24.95■■□□□ 1.58
GABBR1-208ENST00000472823 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
GABBR1-208ENST00000472823 CARD11Q9BXL7 1154 aa24.94■■□□□ 1.58
GABBR1-208ENST00000472823 FOXD1Q16676 465 aa24.93■■□□□ 1.58
GABBR1-208ENST00000472823 WDR43Q15061 677 aaKnown RBP eCLIP24.92■■□□□ 1.58
GABBR1-208ENST00000472823 FHOD3Q2V2M9 1422 aa24.91■■□□□ 1.58
GABBR1-208ENST00000472823 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.89■■□□□ 1.58
GABBR1-208ENST00000472823 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
GABBR1-208ENST00000472823 ERICH6BQ5W0A0 696 aa24.87■■□□□ 1.57
GABBR1-208ENST00000472823 EIF5BO60841 1220 aaKnown RBP24.86■■□□□ 1.57
GABBR1-208ENST00000472823 FMN1Q68DA7 1419 aa24.85■■□□□ 1.57
GABBR1-208ENST00000472823 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
GABBR1-208ENST00000472823 SYNJ1O43426 1573 aa24.83■■□□□ 1.57
GABBR1-208ENST00000472823 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
GABBR1-208ENST00000472823 PLEKHD1A6NEE1 506 aa24.8■■□□□ 1.56
GABBR1-208ENST00000472823 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
GABBR1-208ENST00000472823 L3MBTL2Q969R5 705 aa24.79■■□□□ 1.56
GABBR1-208ENST00000472823 UPF2Q9HAU5 1272 aaKnown RBP24.78■■□□□ 1.56
GABBR1-208ENST00000472823 DEKP35659 375 aaKnown RBP24.77■■□□□ 1.56
GABBR1-208ENST00000472823 LAS1LQ9Y4W2 734 aaKnown RBP24.76■■□□□ 1.55
GABBR1-208ENST00000472823 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
GABBR1-208ENST00000472823 DDRGK1Q96HY6 314 aa24.75■■□□□ 1.55
GABBR1-208ENST00000472823 CHGAP10645 457 aaKnown RBP24.73■■□□□ 1.55
GABBR1-208ENST00000472823 RRBP1Q9P2E9 1410 aaKnown RBP24.73■■□□□ 1.55
GABBR1-208ENST00000472823 TDRD9Q8NDG6 1382 aaKnown RBP24.72■■□□□ 1.55
GABBR1-208ENST00000472823 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
GABBR1-208ENST00000472823 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
GABBR1-208ENST00000472823 IGF1RP08069 1367 aa24.7■■□□□ 1.54
GABBR1-208ENST00000472823 NEFMP07197 916 aa24.69■■□□□ 1.54
GABBR1-208ENST00000472823 DCAF11Q8TEB1 546 aa24.68■■□□□ 1.54
GABBR1-208ENST00000472823 PPM1GO15355 546 aaPredicted RBP24.67■■□□□ 1.54
GABBR1-208ENST00000472823 CCDC18Q5T9S5 1454 aa24.67■■□□□ 1.54
GABBR1-208ENST00000472823 PKD2Q13563 968 aa24.65■■□□□ 1.54
GABBR1-208ENST00000472823 CC2D1BQ5T0F9 858 aaKnown RBP24.64■■□□□ 1.54
GABBR1-208ENST00000472823 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
GABBR1-208ENST00000472823 ARXQ96QS3 562 aa24.63■■□□□ 1.53
GABBR1-208ENST00000472823 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
GABBR1-208ENST00000472823 KNSTRNQ9Y448 316 aa24.62■■□□□ 1.53
GABBR1-208ENST00000472823 LRRC9Q6ZRR7 1453 aa24.61■■□□□ 1.53
GABBR1-208ENST00000472823 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
GABBR1-208ENST00000472823 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
GABBR1-208ENST00000472823 RTN4Q9NQC3 1192 aaKnown RBP24.58■■□□□ 1.53
GABBR1-208ENST00000472823 HSP90AA1P07900 732 aaKnown RBP24.57■■□□□ 1.52
GABBR1-208ENST00000472823 RGS3P49796 1198 aa24.56■■□□□ 1.52
GABBR1-208ENST00000472823 FANCIQ9NVI1 1328 aa24.53■■□□□ 1.52
GABBR1-208ENST00000472823 RCAN3Q9UKA8 241 aa24.53■■□□□ 1.52
GABBR1-208ENST00000472823 FGD6Q6ZV73 1430 aa24.52■■□□□ 1.52
GABBR1-208ENST00000472823 ZBED9Q6R2W3 1325 aa24.51■■□□□ 1.51
GABBR1-208ENST00000472823 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
GABBR1-208ENST00000472823 CDCA8Q53HL2 280 aa24.49■■□□□ 1.51
GABBR1-208ENST00000472823 BECN1Q14457 450 aa24.49■■□□□ 1.51
GABBR1-208ENST00000472823 IPO9Q96P70 1041 aaKnown RBP24.49■■□□□ 1.51
GABBR1-208ENST00000472823 UACAQ9BZF9 1416 aa24.48■■□□□ 1.51
GABBR1-208ENST00000472823 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
GABBR1-208ENST00000472823 RALBP1Q15311 655 aa24.45■■□□□ 1.5
GABBR1-208ENST00000472823 KTN1Q86UP2 1357 aaKnown RBP24.45■■□□□ 1.5
GABBR1-208ENST00000472823 TMF1P82094 1093 aa24.45■■□□□ 1.5
GABBR1-208ENST00000472823 TCERG1O14776 1098 aaKnown RBP24.44■■□□□ 1.5
GABBR1-208ENST00000472823 NUP155O75694 1391 aa24.44■■□□□ 1.5
GABBR1-208ENST00000472823 WASHC2AQ641Q2 1341 aa24.42■■□□□ 1.5
GABBR1-208ENST00000472823 NEUROD2Q15784 382 aa24.42■■□□□ 1.5
GABBR1-208ENST00000472823 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
GABBR1-208ENST00000472823 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
GABBR1-208ENST00000472823 ANP32BQ92688 251 aaKnown RBP24.39■■□□□ 1.5
GABBR1-208ENST00000472823 ROCK2O75116 1388 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms