RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 ERCC6L2Q5T890 1561 aa32.88■■■□□ 2.85
COMMD1-208ENST00000472729 KIAA0586Q9BVV6 1533 aa32.88■■■□□ 2.85
COMMD1-208ENST00000472729 SHROOM2Q13796 1616 aa32.87■■■□□ 2.85
COMMD1-208ENST00000472729 RUSC2Q8N2Y8 1516 aa32.83■■■□□ 2.85
COMMD1-208ENST00000472729 RAPGEF2Q9Y4G8 1499 aa32.74■■■□□ 2.83
COMMD1-208ENST00000472729 NPM1P06748 294 aaKnown RBP eCLIP32.73■■■□□ 2.83
COMMD1-208ENST00000472729 CARMIL2Q6F5E8 1435 aa32.68■■■□□ 2.82
COMMD1-208ENST00000472729 TTBK1Q5TCY1 1321 aaPredicted RBP32.67■■■□□ 2.82
COMMD1-208ENST00000472729 PTPRGP23470 1445 aa32.59■■■□□ 2.81
COMMD1-208ENST00000472729 IQGAP2Q13576 1575 aa32.57■■■□□ 2.8
COMMD1-208ENST00000472729 TNIKQ9UKE5 1360 aa32.54■■■□□ 2.8
COMMD1-208ENST00000472729 CSRNP3Q8WYN3 585 aa32.52■■■□□ 2.8
COMMD1-208ENST00000472729 PRXQ9BXM0 1461 aa32.45■■■□□ 2.79
COMMD1-208ENST00000472729 EEA1Q15075 1411 aa32.41■■■□□ 2.78
COMMD1-208ENST00000472729 FAM9AQ8IZU1 332 aaPredicted RBP32.4■■■□□ 2.78
COMMD1-208ENST00000472729 UGGT2Q9NYU1 1516 aa32.36■■■□□ 2.77
COMMD1-208ENST00000472729 FAM69CQ0P6D2 419 aa32.36■■■□□ 2.77
COMMD1-208ENST00000472729 DISP1Q96F81 1524 aa32.35■■■□□ 2.77
COMMD1-208ENST00000472729 ADCY10Q96PN6 1610 aa32.32■■■□□ 2.76
COMMD1-208ENST00000472729 GOLGA3Q08378 1498 aa32.31■■■□□ 2.76
COMMD1-208ENST00000472729 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
COMMD1-208ENST00000472729 UACAQ9BZF9 1416 aa32.29■■■□□ 2.76
COMMD1-208ENST00000472729 MAPKBP1O60336 1514 aa32.26■■■□□ 2.76
COMMD1-208ENST00000472729 ABCC10Q5T3U5 1492 aa32.23■■■□□ 2.75
COMMD1-208ENST00000472729 ABCC2Q92887 1545 aa32.23■■■□□ 2.75
COMMD1-208ENST00000472729 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
COMMD1-208ENST00000472729 UHRF1BP1LA0JNW5 1464 aa32.2■■■□□ 2.75
COMMD1-208ENST00000472729 CTTNBP2Q8WZ74 1663 aa32.2■■■□□ 2.74
COMMD1-208ENST00000472729 P3H3Q8IVL6 736 aa32.16■■■□□ 2.74
COMMD1-208ENST00000472729 RANGAP1P46060 587 aaPredicted RBP32.15■■■□□ 2.74
COMMD1-208ENST00000472729 PLB1Q6P1J6 1458 aa32.11■■■□□ 2.73
COMMD1-208ENST00000472729 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
COMMD1-208ENST00000472729 EHMT2Q96KQ7 1210 aa32.05■■■□□ 2.72
COMMD1-208ENST00000472729 DIP2BQ9P265 1576 aa32.05■■■□□ 2.72
COMMD1-208ENST00000472729 UBTFP17480 764 aaKnown RBP32.04■■■□□ 2.72
COMMD1-208ENST00000472729 KDM5BQ9UGL1 1544 aa32.03■■■□□ 2.72
COMMD1-208ENST00000472729 KIF13AQ9H1H9 1805 aa32■■■□□ 2.71
COMMD1-208ENST00000472729 KIF21BO75037 1637 aa31.93■■■□□ 2.7
COMMD1-208ENST00000472729 ARID3CA6NKF2 412 aa31.92■■■□□ 2.7
COMMD1-208ENST00000472729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.9■■■□□ 2.7
COMMD1-208ENST00000472729 HNRNPUL2Q1KMD3 747 aaKnown RBP31.9■■■□□ 2.7
COMMD1-208ENST00000472729 KCNH8Q96L42 1107 aa31.9■■■□□ 2.7
COMMD1-208ENST00000472729 ABCA8O94911 1581 aa31.89■■■□□ 2.7
COMMD1-208ENST00000472729 ZCCHC11Q5TAX3 1644 aaKnown RBP31.88■■■□□ 2.69
COMMD1-208ENST00000472729 EPRSP07814 1512 aaKnown RBP31.85■■■□□ 2.69
COMMD1-208ENST00000472729 WDR7Q9Y4E6 1490 aa31.85■■■□□ 2.69
COMMD1-208ENST00000472729 GLI2P10070 1586 aa31.83■■■□□ 2.69
COMMD1-208ENST00000472729 SAMD9Q5K651 1589 aa31.82■■■□□ 2.68
COMMD1-208ENST00000472729 FHOD3Q2V2M9 1422 aa31.8■■■□□ 2.68
COMMD1-208ENST00000472729 AEBP2Q6ZN18 517 aaPredicted RBP31.78■■■□□ 2.68
COMMD1-208ENST00000472729 TSPOAP1O95153 1857 aa31.75■■■□□ 2.67
COMMD1-208ENST00000472729 EFCAB5A4FU69 1503 aa31.74■■■□□ 2.67
COMMD1-208ENST00000472729 ATP10BO94823 1461 aa31.72■■■□□ 2.67
COMMD1-208ENST00000472729 TEX14Q8IWB6 1497 aa31.72■■■□□ 2.67
COMMD1-208ENST00000472729 KDM6BO15054 1643 aa31.72■■■□□ 2.67
COMMD1-208ENST00000472729 CD109Q6YHK3 1445 aa31.68■■■□□ 2.66
COMMD1-208ENST00000472729 ATP1B4Q9UN42 357 aaPredicted RBP31.68■■■□□ 2.66
COMMD1-208ENST00000472729 RAPGEF6Q8TEU7 1601 aa31.67■■■□□ 2.66
COMMD1-208ENST00000472729 PLEKHD1A6NEE1 506 aa31.65■■■□□ 2.66
COMMD1-208ENST00000472729 MAP3K4Q9Y6R4 1608 aa31.6■■■□□ 2.65
COMMD1-208ENST00000472729 NUP153P49790 1475 aaKnown RBP31.59■■■□□ 2.65
COMMD1-208ENST00000472729 FMN1Q68DA7 1419 aa31.58■■■□□ 2.65
COMMD1-208ENST00000472729 MAGI3Q5TCQ9 1506 aa31.53■■■□□ 2.64
COMMD1-208ENST00000472729 ARHGAP35Q9NRY4 1499 aa31.5■■■□□ 2.63
COMMD1-208ENST00000472729 PPRC1Q5VV67 1664 aaKnown RBP31.5■■■□□ 2.63
COMMD1-208ENST00000472729 CDK11AQ9UQ88 783 aaPredicted RBP31.49■■■□□ 2.63
COMMD1-208ENST00000472729 CFAP43Q8NDM7 1665 aa31.48■■■□□ 2.63
COMMD1-208ENST00000472729 COL17A1Q9UMD9 1497 aaPredicted RBP31.43■■■□□ 2.62
COMMD1-208ENST00000472729 PHLDB1Q86UU1 1377 aa31.4■■■□□ 2.62
COMMD1-208ENST00000472729 ABCA9Q8IUA7 1624 aa31.35■■■□□ 2.61
COMMD1-208ENST00000472729 HECW1Q76N89 1606 aa31.33■■■□□ 2.61
COMMD1-208ENST00000472729 CDK13Q14004 1512 aaKnown RBP31.33■■■□□ 2.61
COMMD1-208ENST00000472729 CLIP1P30622 1438 aa31.32■■■□□ 2.6
COMMD1-208ENST00000472729 NEO1Q92859 1461 aa31.27■■■□□ 2.6
COMMD1-208ENST00000472729 ARAP3Q8WWN8 1544 aa31.26■■■□□ 2.59
COMMD1-208ENST00000472729 KDM4FA0A1W2PPD8 638 aa31.25■■■□□ 2.59
COMMD1-208ENST00000472729 RAPGEF3O95398 923 aa31.24■■■□□ 2.59
COMMD1-208ENST00000472729 CASKIN1Q8WXD9 1431 aa31.22■■■□□ 2.59
COMMD1-208ENST00000472729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.19■■■□□ 2.58
COMMD1-208ENST00000472729 FANCAO15360 1455 aa31.18■■■□□ 2.58
COMMD1-208ENST00000472729 CCDC18Q5T9S5 1454 aa31.16■■■□□ 2.58
COMMD1-208ENST00000472729 TROQ12816 1431 aaPredicted RBP31.15■■■□□ 2.58
COMMD1-208ENST00000472729 AKNAQ7Z591 1439 aa31.15■■■□□ 2.58
COMMD1-208ENST00000472729 EFCAB2Q5VUJ9 269 aa31.14■■■□□ 2.58
COMMD1-208ENST00000472729 PLCH2O75038 1416 aa31.11■■■□□ 2.57
COMMD1-208ENST00000472729 DENND4BO75064 1496 aaPredicted RBP31.11■■■□□ 2.57
COMMD1-208ENST00000472729 ADGRL1O94910 1474 aa31.09■■■□□ 2.57
COMMD1-208ENST00000472729 FYCO1Q9BQS8 1478 aa31.09■■■□□ 2.57
COMMD1-208ENST00000472729 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
COMMD1-208ENST00000472729 PCF11O94913 1555 aaKnown RBP31.08■■■□□ 2.57
COMMD1-208ENST00000472729 CFAP74Q9C0B2 1584 aa31.06■■■□□ 2.56
COMMD1-208ENST00000472729 CEP162Q5TB80 1403 aa31.05■■■□□ 2.56
COMMD1-208ENST00000472729 KIF14Q15058 1648 aa31.05■■■□□ 2.56
COMMD1-208ENST00000472729 ARID4BQ4LE39 1312 aaPredicted RBP31.04■■■□□ 2.56
COMMD1-208ENST00000472729 LOC105371045A0A1W2PR82 267 aa31.03■■■□□ 2.56
COMMD1-208ENST00000472729 SCAPERQ9BY12 1400 aa31■■■□□ 2.55
COMMD1-208ENST00000472729 MYT1LQ9UL68 1186 aa30.96■■■□□ 2.55
COMMD1-208ENST00000472729 ARHGAP5Q13017 1502 aa30.96■■■□□ 2.55
COMMD1-208ENST00000472729 MTUS2Q5JR59 1369 aa30.92■■■□□ 2.54
COMMD1-208ENST00000472729 POGZQ7Z3K3 1410 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms