RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 JPH4Q96JJ6 628 aa29.14■■■□□ 2.26
PKD1-208ENST00000472577 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
PKD1-208ENST00000472577 AEBP2Q6ZN18 517 aaPredicted RBP29.09■■■□□ 2.25
PKD1-208ENST00000472577 ADCY10Q96PN6 1610 aa29.03■■■□□ 2.24
PKD1-208ENST00000472577 IGF1RP08069 1367 aa29.02■■■□□ 2.24
PKD1-208ENST00000472577 CUL7Q14999 1698 aa29■■■□□ 2.23
PKD1-208ENST00000472577 KIAA0586Q9BVV6 1533 aa28.98■■■□□ 2.23
PKD1-208ENST00000472577 MAPKBP1O60336 1514 aa28.97■■■□□ 2.23
PKD1-208ENST00000472577 ABCC10Q5T3U5 1492 aa28.96■■■□□ 2.23
PKD1-208ENST00000472577 DIP2BQ9P265 1576 aa28.94■■■□□ 2.22
PKD1-208ENST00000472577 FAM69CQ0P6D2 419 aa28.88■■■□□ 2.21
PKD1-208ENST00000472577 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
PKD1-208ENST00000472577 NPM1P06748 294 aaKnown RBP eCLIP28.83■■■□□ 2.21
PKD1-208ENST00000472577 EEA1Q15075 1411 aa28.75■■■□□ 2.19
PKD1-208ENST00000472577 TSPOAP1O95153 1857 aa28.72■■■□□ 2.19
PKD1-208ENST00000472577 IQGAP2Q13576 1575 aa28.72■■■□□ 2.19
PKD1-208ENST00000472577 PTPRGP23470 1445 aa28.72■■■□□ 2.19
PKD1-208ENST00000472577 KDM6BO15054 1643 aa28.72■■■□□ 2.19
PKD1-208ENST00000472577 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
PKD1-208ENST00000472577 CSRNP3Q8WYN3 585 aa28.7■■■□□ 2.18
PKD1-208ENST00000472577 FAM9AQ8IZU1 332 aaPredicted RBP28.69■■■□□ 2.18
PKD1-208ENST00000472577 TTBK1Q5TCY1 1321 aaPredicted RBP28.69■■■□□ 2.18
PKD1-208ENST00000472577 PRXQ9BXM0 1461 aa28.68■■■□□ 2.18
PKD1-208ENST00000472577 TNIKQ9UKE5 1360 aa28.65■■■□□ 2.18
PKD1-208ENST00000472577 ABCC2Q92887 1545 aa28.65■■■□□ 2.18
PKD1-208ENST00000472577 CARMIL2Q6F5E8 1435 aa28.64■■■□□ 2.18
PKD1-208ENST00000472577 DISP1Q96F81 1524 aa28.62■■■□□ 2.17
PKD1-208ENST00000472577 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
PKD1-208ENST00000472577 PPRC1Q5VV67 1664 aaKnown RBP28.58■■■□□ 2.16
PKD1-208ENST00000472577 UHRF1BP1LA0JNW5 1464 aa28.56■■■□□ 2.16
PKD1-208ENST00000472577 GLI2P10070 1586 aa28.52■■■□□ 2.16
PKD1-208ENST00000472577 UGGT2Q9NYU1 1516 aa28.52■■■□□ 2.16
PKD1-208ENST00000472577 UACAQ9BZF9 1416 aa28.52■■■□□ 2.16
PKD1-208ENST00000472577 PLB1Q6P1J6 1458 aa28.51■■■□□ 2.15
PKD1-208ENST00000472577 KIAA0556O60303 1618 aa28.49■■■□□ 2.15
PKD1-208ENST00000472577 KDM4FA0A1W2PPD8 638 aa28.48■■■□□ 2.15
PKD1-208ENST00000472577 KIF21BO75037 1637 aa28.47■■■□□ 2.15
PKD1-208ENST00000472577 KDM5BQ9UGL1 1544 aa28.45■■■□□ 2.15
PKD1-208ENST00000472577 ZCCHC11Q5TAX3 1644 aaKnown RBP28.44■■■□□ 2.14
PKD1-208ENST00000472577 CTTNBP2Q8WZ74 1663 aa28.44■■■□□ 2.14
PKD1-208ENST00000472577 MAP3K4Q9Y6R4 1608 aa28.41■■■□□ 2.14
PKD1-208ENST00000472577 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
PKD1-208ENST00000472577 COL17A1Q9UMD9 1497 aaPredicted RBP28.36■■■□□ 2.13
PKD1-208ENST00000472577 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
PKD1-208ENST00000472577 GOLGA3Q08378 1498 aa28.31■■■□□ 2.12
PKD1-208ENST00000472577 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
PKD1-208ENST00000472577 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
PKD1-208ENST00000472577 TEX14Q8IWB6 1497 aa28.24■■■□□ 2.11
PKD1-208ENST00000472577 ABCA8O94911 1581 aa28.24■■■□□ 2.11
PKD1-208ENST00000472577 UBTFP17480 764 aaKnown RBP28.2■■■□□ 2.1
PKD1-208ENST00000472577 CFAP43Q8NDM7 1665 aa28.13■■■□□ 2.09
PKD1-208ENST00000472577 SAMD9Q5K651 1589 aa28.1■■■□□ 2.09
PKD1-208ENST00000472577 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
PKD1-208ENST00000472577 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.09
PKD1-208ENST00000472577 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
PKD1-208ENST00000472577 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
PKD1-208ENST00000472577 KCNH8Q96L42 1107 aa28.03■■■□□ 2.08
PKD1-208ENST00000472577 EFCAB5A4FU69 1503 aa27.99■■■□□ 2.07
PKD1-208ENST00000472577 ARID3CA6NKF2 412 aa27.98■■■□□ 2.07
PKD1-208ENST00000472577 HECW2Q9P2P5 1572 aa27.96■■■□□ 2.07
PKD1-208ENST00000472577 ATP10BO94823 1461 aa27.95■■■□□ 2.07
PKD1-208ENST00000472577 FHOD3Q2V2M9 1422 aa27.94■■■□□ 2.06
PKD1-208ENST00000472577 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
PKD1-208ENST00000472577 ARHGAP35Q9NRY4 1499 aa27.92■■■□□ 2.06
PKD1-208ENST00000472577 ABCA9Q8IUA7 1624 aa27.89■■■□□ 2.05
PKD1-208ENST00000472577 RAPGEF6Q8TEU7 1601 aa27.88■■■□□ 2.05
PKD1-208ENST00000472577 ARAP3Q8WWN8 1544 aa27.87■■■□□ 2.05
PKD1-208ENST00000472577 ILDR1Q86SU0 546 aaPredicted RBP27.81■■■□□ 2.04
PKD1-208ENST00000472577 CLIP1P30622 1438 aa27.81■■■□□ 2.04
PKD1-208ENST00000472577 NUP153P49790 1475 aaKnown RBP27.79■■■□□ 2.04
PKD1-208ENST00000472577 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
PKD1-208ENST00000472577 FRMPD1Q5SYB0 1578 aa27.75■■■□□ 2.03
PKD1-208ENST00000472577 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
PKD1-208ENST00000472577 NEO1Q92859 1461 aa27.7■■■□□ 2.03
PKD1-208ENST00000472577 RAPGEF3O95398 923 aa27.69■■■□□ 2.02
PKD1-208ENST00000472577 ADAMTSL3P82987 1691 aa27.68■■■□□ 2.02
PKD1-208ENST00000472577 PHLDB1Q86UU1 1377 aa27.68■■■□□ 2.02
PKD1-208ENST00000472577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
PKD1-208ENST00000472577 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
PKD1-208ENST00000472577 PTPRMP28827 1452 aa27.61■■■□□ 2.01
PKD1-208ENST00000472577 BCORL1Q5H9F3 1711 aa27.6■■■□□ 2.01
PKD1-208ENST00000472577 ARHGEF40Q8TER5 1519 aa27.58■■■□□ 2.01
PKD1-208ENST00000472577 PCF11O94913 1555 aaKnown RBP27.58■■■□□ 2.01
PKD1-208ENST00000472577 TTC37Q6PGP7 1564 aa27.58■■■□□ 2.01
PKD1-208ENST00000472577 HECW1Q76N89 1606 aa27.58■■■□□ 2.01
PKD1-208ENST00000472577 RICTORQ6R327 1708 aa27.58■■■□□ 2.01
PKD1-208ENST00000472577 MADDQ8WXG6 1647 aa27.57■■■□□ 2
PKD1-208ENST00000472577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.57■■■□□ 2
PKD1-208ENST00000472577 CASKIN1Q8WXD9 1431 aa27.54■■■□□ 2
PKD1-208ENST00000472577 ATP1B4Q9UN42 357 aaPredicted RBP27.54■■■□□ 2
PKD1-208ENST00000472577 CDK13Q14004 1512 aaKnown RBP27.53■■■□□ 2
PKD1-208ENST00000472577 FANCAO15360 1455 aa27.51■■■□□ 2
PKD1-208ENST00000472577 CFAP74Q9C0B2 1584 aa27.51■■□□□ 1.99
PKD1-208ENST00000472577 DENND4BO75064 1496 aaPredicted RBP27.51■■□□□ 1.99
PKD1-208ENST00000472577 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
PKD1-208ENST00000472577 AKNAQ7Z591 1439 aa27.5■■□□□ 1.99
PKD1-208ENST00000472577 PLEKHD1A6NEE1 506 aa27.49■■□□□ 1.99
PKD1-208ENST00000472577 FYCO1Q9BQS8 1478 aa27.49■■□□□ 1.99
PKD1-208ENST00000472577 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
PKD1-208ENST00000472577 ZMYM4Q5VZL5 1548 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms