RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 IGF1RP08069 1367 aa17.24■□□□□ 0.35
NUDCD3-205ENST00000472246 CUL7Q14999 1698 aa17.23■□□□□ 0.35
NUDCD3-205ENST00000472246 KIAA0586Q9BVV6 1533 aa17.17■□□□□ 0.34
NUDCD3-205ENST00000472246 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
NUDCD3-205ENST00000472246 ADCY10Q96PN6 1610 aa17.13■□□□□ 0.33
NUDCD3-205ENST00000472246 CARMIL1Q5VZK9 1371 aa17.12■□□□□ 0.33
NUDCD3-205ENST00000472246 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
NUDCD3-205ENST00000472246 ABCC10Q5T3U5 1492 aa17.05■□□□□ 0.32
NUDCD3-205ENST00000472246 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
NUDCD3-205ENST00000472246 DIP2BQ9P265 1576 aa17.05■□□□□ 0.32
NUDCD3-205ENST00000472246 IQGAP2Q13576 1575 aa17.04■□□□□ 0.32
NUDCD3-205ENST00000472246 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
NUDCD3-205ENST00000472246 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.32
NUDCD3-205ENST00000472246 PTPRGP23470 1445 aa17.01■□□□□ 0.31
NUDCD3-205ENST00000472246 CARMIL2Q6F5E8 1435 aa16.99■□□□□ 0.31
NUDCD3-205ENST00000472246 AEBP2Q6ZN18 517 aaPredicted RBP16.99■□□□□ 0.31
NUDCD3-205ENST00000472246 TNIKQ9UKE5 1360 aa16.98■□□□□ 0.31
NUDCD3-205ENST00000472246 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
NUDCD3-205ENST00000472246 DISP1Q96F81 1524 aa16.96■□□□□ 0.31
NUDCD3-205ENST00000472246 TSPOAP1O95153 1857 aa16.94■□□□□ 0.3
NUDCD3-205ENST00000472246 ABCC2Q92887 1545 aa16.94■□□□□ 0.3
NUDCD3-205ENST00000472246 UGGT2Q9NYU1 1516 aa16.92■□□□□ 0.3
NUDCD3-205ENST00000472246 KIAA0556O60303 1618 aa16.9■□□□□ 0.3
NUDCD3-205ENST00000472246 UHRF1BP1LA0JNW5 1464 aa16.9■□□□□ 0.3
NUDCD3-205ENST00000472246 KDM6BO15054 1643 aa16.89■□□□□ 0.29
NUDCD3-205ENST00000472246 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
NUDCD3-205ENST00000472246 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
NUDCD3-205ENST00000472246 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
NUDCD3-205ENST00000472246 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
NUDCD3-205ENST00000472246 GLI2P10070 1586 aa16.83■□□□□ 0.28
NUDCD3-205ENST00000472246 ZCCHC11Q5TAX3 1644 aaKnown RBP16.83■□□□□ 0.28
NUDCD3-205ENST00000472246 PPRC1Q5VV67 1664 aaKnown RBP16.83■□□□□ 0.28
NUDCD3-205ENST00000472246 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
NUDCD3-205ENST00000472246 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
NUDCD3-205ENST00000472246 EPRSP07814 1512 aaKnown RBP16.79■□□□□ 0.28
NUDCD3-205ENST00000472246 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
NUDCD3-205ENST00000472246 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
NUDCD3-205ENST00000472246 ABCA8O94911 1581 aa16.73■□□□□ 0.27
NUDCD3-205ENST00000472246 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
NUDCD3-205ENST00000472246 COL17A1Q9UMD9 1497 aaPredicted RBP16.7■□□□□ 0.26
NUDCD3-205ENST00000472246 KDM4FA0A1W2PPD8 638 aa16.7■□□□□ 0.26
NUDCD3-205ENST00000472246 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
NUDCD3-205ENST00000472246 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
NUDCD3-205ENST00000472246 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
NUDCD3-205ENST00000472246 CFAP43Q8NDM7 1665 aa16.63■□□□□ 0.25
NUDCD3-205ENST00000472246 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
NUDCD3-205ENST00000472246 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
NUDCD3-205ENST00000472246 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
NUDCD3-205ENST00000472246 CD109Q6YHK3 1445 aa16.61■□□□□ 0.25
NUDCD3-205ENST00000472246 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
NUDCD3-205ENST00000472246 ADGRL1O94910 1474 aa16.59■□□□□ 0.25
NUDCD3-205ENST00000472246 EEA1Q15075 1411 aa16.58■□□□□ 0.24
NUDCD3-205ENST00000472246 ATP10BO94823 1461 aa16.58■□□□□ 0.24
NUDCD3-205ENST00000472246 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
NUDCD3-205ENST00000472246 FAM9AQ8IZU1 332 aaPredicted RBP16.55■□□□□ 0.24
NUDCD3-205ENST00000472246 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
NUDCD3-205ENST00000472246 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
NUDCD3-205ENST00000472246 ABCA9Q8IUA7 1624 aa16.51■□□□□ 0.23
NUDCD3-205ENST00000472246 NUP153P49790 1475 aaKnown RBP16.5■□□□□ 0.23
NUDCD3-205ENST00000472246 KIF21BO75037 1637 aa16.5■□□□□ 0.23
NUDCD3-205ENST00000472246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
NUDCD3-205ENST00000472246 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
NUDCD3-205ENST00000472246 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
NUDCD3-205ENST00000472246 EFCAB5A4FU69 1503 aa16.45■□□□□ 0.22
NUDCD3-205ENST00000472246 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
NUDCD3-205ENST00000472246 NEO1Q92859 1461 aa16.4■□□□□ 0.22
NUDCD3-205ENST00000472246 FRMPD1Q5SYB0 1578 aa16.38■□□□□ 0.21
NUDCD3-205ENST00000472246 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
NUDCD3-205ENST00000472246 CDK13Q14004 1512 aaKnown RBP16.37■□□□□ 0.21
NUDCD3-205ENST00000472246 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
NUDCD3-205ENST00000472246 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
NUDCD3-205ENST00000472246 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
NUDCD3-205ENST00000472246 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
NUDCD3-205ENST00000472246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.35■□□□□ 0.21
NUDCD3-205ENST00000472246 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
NUDCD3-205ENST00000472246 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
NUDCD3-205ENST00000472246 ARHGAP35Q9NRY4 1499 aa16.32■□□□□ 0.2
NUDCD3-205ENST00000472246 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
NUDCD3-205ENST00000472246 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
NUDCD3-205ENST00000472246 FANCAO15360 1455 aa16.3■□□□□ 0.2
NUDCD3-205ENST00000472246 HECW1Q76N89 1606 aa16.3■□□□□ 0.2
NUDCD3-205ENST00000472246 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
NUDCD3-205ENST00000472246 ADAMTSL3P82987 1691 aa16.29■□□□□ 0.2
NUDCD3-205ENST00000472246 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
NUDCD3-205ENST00000472246 ARHGEF40Q8TER5 1519 aa16.28■□□□□ 0.2
NUDCD3-205ENST00000472246 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
NUDCD3-205ENST00000472246 BCORL1Q5H9F3 1711 aa16.27■□□□□ 0.19
NUDCD3-205ENST00000472246 ATP1B4Q9UN42 357 aaPredicted RBP16.26■□□□□ 0.19
NUDCD3-205ENST00000472246 PTPRMP28827 1452 aa16.25■□□□□ 0.19
NUDCD3-205ENST00000472246 MADDQ8WXG6 1647 aa16.25■□□□□ 0.19
NUDCD3-205ENST00000472246 ARID4BQ4LE39 1312 aaPredicted RBP16.23■□□□□ 0.19
NUDCD3-205ENST00000472246 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
NUDCD3-205ENST00000472246 KIF14Q15058 1648 aa16.23■□□□□ 0.19
NUDCD3-205ENST00000472246 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
NUDCD3-205ENST00000472246 PLCH2O75038 1416 aa16.21■□□□□ 0.19
NUDCD3-205ENST00000472246 SIGLEC1Q9BZZ2 1709 aa16.21■□□□□ 0.19
NUDCD3-205ENST00000472246 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
NUDCD3-205ENST00000472246 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
NUDCD3-205ENST00000472246 ZFYVE16Q7Z3T8 1539 aa16.19■□□□□ 0.18
NUDCD3-205ENST00000472246 RIMS1Q86UR5 1692 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms