RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 IGF1RP08069 1367 aa15.65■□□□□ 0.1
USF1-204ENST00000472217 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
USF1-204ENST00000472217 PRG4Q92954 1404 aaPredicted RBP15.61■□□□□ 0.09
USF1-204ENST00000472217 JPH4Q96JJ6 628 aa15.58■□□□□ 0.08
USF1-204ENST00000472217 KIAA0586Q9BVV6 1533 aa15.57■□□□□ 0.08
USF1-204ENST00000472217 CARMIL1Q5VZK9 1371 aa15.55■□□□□ 0.08
USF1-204ENST00000472217 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
USF1-204ENST00000472217 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.06
USF1-204ENST00000472217 ADCY10Q96PN6 1610 aa15.44■□□□□ 0.06
USF1-204ENST00000472217 CARMIL2Q6F5E8 1435 aa15.4■□□□□ 0.06
USF1-204ENST00000472217 KIF13AQ9H1H9 1805 aa15.4■□□□□ 0.06
USF1-204ENST00000472217 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
USF1-204ENST00000472217 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
USF1-204ENST00000472217 PTPRGP23470 1445 aa15.37■□□□□ 0.05
USF1-204ENST00000472217 UGGT2Q9NYU1 1516 aa15.37■□□□□ 0.05
USF1-204ENST00000472217 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
USF1-204ENST00000472217 CTTNBP2Q8WZ74 1663 aa15.36■□□□□ 0.05
USF1-204ENST00000472217 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
USF1-204ENST00000472217 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
USF1-204ENST00000472217 PRXQ9BXM0 1461 aa15.33■□□□□ 0.05
USF1-204ENST00000472217 KIAA0556O60303 1618 aa15.33■□□□□ 0.04
USF1-204ENST00000472217 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.04
USF1-204ENST00000472217 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
USF1-204ENST00000472217 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
USF1-204ENST00000472217 UHRF1BP1LA0JNW5 1464 aa15.28■□□□□ 0.04
USF1-204ENST00000472217 UACAQ9BZF9 1416 aa15.27■□□□□ 0.04
USF1-204ENST00000472217 FAM69CQ0P6D2 419 aa15.27■□□□□ 0.04
USF1-204ENST00000472217 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
USF1-204ENST00000472217 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
USF1-204ENST00000472217 EEA1Q15075 1411 aa15.22■□□□□ 0.03
USF1-204ENST00000472217 ASXL2Q76L83 1435 aa15.22■□□□□ 0.03
USF1-204ENST00000472217 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
USF1-204ENST00000472217 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.02
USF1-204ENST00000472217 PLB1Q6P1J6 1458 aa15.2■□□□□ 0.02
USF1-204ENST00000472217 TSPOAP1O95153 1857 aa15.18■□□□□ 0.02
USF1-204ENST00000472217 ABCA8O94911 1581 aa15.17■□□□□ 0.02
USF1-204ENST00000472217 GLI2P10070 1586 aa15.17■□□□□ 0.02
USF1-204ENST00000472217 KDM6BO15054 1643 aa15.14■□□□□ 0.01
USF1-204ENST00000472217 SAMD9Q5K651 1589 aa15.14■□□□□ 0.01
USF1-204ENST00000472217 EPRSP07814 1512 aaKnown RBP15.13■□□□□ 0.01
USF1-204ENST00000472217 PPRC1Q5VV67 1664 aaKnown RBP15.13■□□□□ 0.01
USF1-204ENST00000472217 FAM9AQ8IZU1 332 aaPredicted RBP15.13■□□□□ 0.01
USF1-204ENST00000472217 KIF21BO75037 1637 aa15.12■□□□□ 0.01
USF1-204ENST00000472217 MAP3K4Q9Y6R4 1608 aa15.11■□□□□ 0.01
USF1-204ENST00000472217 WDR7Q9Y4E6 1490 aa15.11■□□□□ 0.01
USF1-204ENST00000472217 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
USF1-204ENST00000472217 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
USF1-204ENST00000472217 TEX14Q8IWB6 1497 aa15.03■□□□□ -0
USF1-204ENST00000472217 RANGAP1P46060 587 aaPredicted RBP15.03■□□□□ -0
USF1-204ENST00000472217 CFAP43Q8NDM7 1665 aa15.03■□□□□ -0
USF1-204ENST00000472217 ATP10BO94823 1461 aa15.02■□□□□ -0
USF1-204ENST00000472217 FHOD3Q2V2M9 1422 aa15.02■□□□□ -0
USF1-204ENST00000472217 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
USF1-204ENST00000472217 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
USF1-204ENST00000472217 COL17A1Q9UMD9 1497 aaPredicted RBP14.99□□□□□ -0.01
USF1-204ENST00000472217 NUP153P49790 1475 aaKnown RBP14.98□□□□□ -0.01
USF1-204ENST00000472217 KCNH8Q96L42 1107 aa14.98□□□□□ -0.01
USF1-204ENST00000472217 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
USF1-204ENST00000472217 MAGI3Q5TCQ9 1506 aa14.97□□□□□ -0.01
USF1-204ENST00000472217 EHMT2Q96KQ7 1210 aa14.97□□□□□ -0.01
USF1-204ENST00000472217 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
USF1-204ENST00000472217 ABCA9Q8IUA7 1624 aa14.94□□□□□ -0.02
USF1-204ENST00000472217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
USF1-204ENST00000472217 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
USF1-204ENST00000472217 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
USF1-204ENST00000472217 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
USF1-204ENST00000472217 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
USF1-204ENST00000472217 ARAP3Q8WWN8 1544 aa14.86□□□□□ -0.03
USF1-204ENST00000472217 HECW1Q76N89 1606 aa14.85□□□□□ -0.03
USF1-204ENST00000472217 FMN1Q68DA7 1419 aa14.85□□□□□ -0.03
USF1-204ENST00000472217 ADGRL1O94910 1474 aa14.83□□□□□ -0.03
USF1-204ENST00000472217 PLEKHD1A6NEE1 506 aa14.83□□□□□ -0.04
USF1-204ENST00000472217 NEO1Q92859 1461 aa14.82□□□□□ -0.04
USF1-204ENST00000472217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
USF1-204ENST00000472217 TTC37Q6PGP7 1564 aa14.81□□□□□ -0.04
USF1-204ENST00000472217 PHLDB1Q86UU1 1377 aa14.8□□□□□ -0.04
USF1-204ENST00000472217 LRRIQ1Q96JM4 1722 aa14.78□□□□□ -0.04
USF1-204ENST00000472217 FRMPD1Q5SYB0 1578 aa14.78□□□□□ -0.04
USF1-204ENST00000472217 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
USF1-204ENST00000472217 CFAP74Q9C0B2 1584 aa14.77□□□□□ -0.04
USF1-204ENST00000472217 PCF11O94913 1555 aaKnown RBP14.76□□□□□ -0.05
USF1-204ENST00000472217 FANCAO15360 1455 aa14.76□□□□□ -0.05
USF1-204ENST00000472217 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
USF1-204ENST00000472217 KIF14Q15058 1648 aa14.74□□□□□ -0.05
USF1-204ENST00000472217 RICTORQ6R327 1708 aa14.73□□□□□ -0.05
USF1-204ENST00000472217 AKNAQ7Z591 1439 aa14.73□□□□□ -0.05
USF1-204ENST00000472217 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
USF1-204ENST00000472217 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
USF1-204ENST00000472217 CLIP1P30622 1438 aa14.71□□□□□ -0.05
USF1-204ENST00000472217 MYO5CQ9NQX4 1742 aa14.71□□□□□ -0.05
USF1-204ENST00000472217 PLCH2O75038 1416 aa14.7□□□□□ -0.06
USF1-204ENST00000472217 TROQ12816 1431 aaPredicted RBP14.7□□□□□ -0.06
USF1-204ENST00000472217 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
USF1-204ENST00000472217 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
USF1-204ENST00000472217 ARHGEF40Q8TER5 1519 aa14.68□□□□□ -0.06
USF1-204ENST00000472217 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
USF1-204ENST00000472217 ZMYM4Q5VZL5 1548 aa14.67□□□□□ -0.06
USF1-204ENST00000472217 POGZQ7Z3K3 1410 aa14.64□□□□□ -0.07
USF1-204ENST00000472217 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
USF1-204ENST00000472217 ADAMTSL3P82987 1691 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms